Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2699 ATGAACATGATCATCATGCAAAACTTAGCTGATAGACTAAGACCTCTTGTGGGTTTGAATGGTTGGGACTACTGTGTCTACTGGAAACTGAGTGAAGACCAAAGGTTTCTTGAGTGGTTGGGATGCTGTTGTGGTGGCAATGAAAATGGTGGGGAAGATCACCTTTTCTCCGTCTCTTCATCATGCAGGGATACCATGTTTCCACATGCCAGAACAAAGCCCTGTGATCTTCTTTTCCAACTTCCTACTTCCATACTCATAGATTCAGGCAATATTCATGCACGGACCCTCTTAACAAACCAACCCAATTGGGTGAACTATTCCAATTCCTTGGATCCAAACATCTTGGAAGAAACAATTGGGACCCAGGTTTTGATTCCAGTGCCTGGTGGACTAGTTGAGCTGTTTGTAACCAAACAAGTATCTGAAGATCAGCAAATAGTAGATTTTGTGACAGCACAGTGCATTTTGTTGGTGGAGCAGGAAGCAGCAACCAACTCAATCAACTTCAACATTGATGTGAACTCAATAAGCGACATGCAATCAAATCATCAACTCCTAGGAGATGACAATGAAGGAAACAACAGGAACAATCATTTTCAGCCACAAAACATTCCATCAGATCAGAATTCACATGACATCCCAATCAGCCTAAGCAGCTCTCCACTGAACTTCATGCAGCAATTCAATTACAGCCAGCAGCAGCAGCAGAACAGAATGCAAAATGATGGAATCTCTGAAGAATACCAAGGTGGCCCCTTCCTCCATGACCAGCTCAAATCCACCCCAGAAGAACATGATAACAACAACAGCAGCTATCAGAAAGGCATGATGGTGAATGATGATGCACAAGAACAGTTGTTATTGGACACAAAGGAGAATAACAATAATAGTCAAGGACATGATGAGAAGGAGTTGGTGAAACATGTTGGAGCTGGGAGATCAGATTCGATGTCAGATTGCAGTGATCAGAATGAAGAAGAGGATGATGGGAAGTACAGGAGGAGGAATGGGAAAGGGAACCAATCAAAGAACCTTGTGGCAGAGAGGAAGAGAAGGAAGAAACTCAATGACAGGCTGTACAACCTTCGCTCTCTGGTTCCAAGGATCTCTAAGCTTGACAGAGCATCTATTCTTGGTGATGCCATTGAGTTTGTGAAGGATCTGCAGAAGCAAGTGAAGGAGCTTCAGGATGAGCTCGAGGACAACAATTCAGATACAGGGGCAGATAGCAACTGCATCAATAACAACAATAACAATAGTAATAATAATCCATTTGTTGGGGTGCAGCAGCCAGATGTTGTTAGACCAAGCAATGGATCAGGTGAAGATGTTATTAGGACCCAAAATGGGTTTCATGTGGGGGCTTCAGGGAATTGCTGCTATGTGCCAAAGCAAAAACAGGAAGCGGATGCTGCTGCCATTGAGAAGCAGACACAGCAGATGGAGGCGCAAGTGGAAGTGGCTGTAATAGATGGGAATGAGTACTATGTGAAGGTGTTCTGTGAGCACAGGGCAGGAGGGTTTGTGAGATTGATGGAGGCACTCAACACACTTGGCATGGATGTAGTGCATGCCACTGTTACCAGCCACAAAGGCCTTGTCTCCAATGTCTTCAAAGTTGAGAAAAAGGACAGTGAAATGGTTGAGGCTGAAGATGTAAGAGACTCACTGCTAGAGCTAACAAGGAATAATCCATCAAGAGCAGCAGCAGCAGCAGGAGGGTGGAGTTCTAATGAGATCATCAACACAGCAGCACTAGAGAGGGATCACCAGATGGCCGCTTATCACCCCCATCCTTTTCATTCCTAA 1812 0.4454 MNMIIMQNLADRLRPLVGLNGWDYCVYWKLSEDQRFLEWLGCCCGGNENGGEDHLFSVSSSCRDTMFPHARTKPCDLLFQLPTSILIDSGNIHARTLLTNQPNWVNYSNSLDPNILEETIGTQVLIPVPGGLVELFVTKQVSEDQQIVDFVTAQCILLVEQEAATNSINFNIDVNSISDMQSNHQLLGDDNEGNNRNNHFQPQNIPSDQNSHDIPISLSSSPLNFMQQFNYSQQQQQNRMQNDGISEEYQGGPFLHDQLKSTPEEHDNNNSSYQKGMMVNDDAQEQLLLDTKENNNNSQGHDEKELVKHVGAGRSDSMSDCSDQNEEEDDGKYRRRNGKGNQSKNLVAERKRRKKLNDRLYNLRSLVPRISKLDRASILGDAIEFVKDLQKQVKELQDELEDNNSDTGADSNCINNNNNNSNNNPFVGVQQPDVVRPSNGSGEDVIRTQNGFHVGASGNCCYVPKQKQEADAAAIEKQTQQMEAQVEVAVIDGNEYYVKVFCEHRAGGFVRLMEALNTLGMDVVHATVTSHKGLVSNVFKVEKKDSEMVEAEDVRDSLLELTRNNPSRAAAAAGGWSSNEIINTAALERDHQMAAYHPHPFHS* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2699 603 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 340 389 IPR011598 GO:0046983
Aev09g2699 603 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 343 402 IPR036638 GO:0046983
Aev09g2699 603 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 93 566 - -
Aev09g2699 603 PANTHER TRANSCRIPTION FACTOR ABORTED MICROSPORES 93 566 - -
Aev09g2699 603 Coils Coil 465 485 - -
Aev09g2699 603 SMART finulus 346 395 IPR011598 GO:0046983
Aev09g2699 603 MobiDBLite consensus disorder prediction 406 443 - -
Aev09g2699 603 MobiDBLite consensus disorder prediction 397 443 - -
Aev09g2699 603 CDD ACT_UUR-ACR-like 498 561 - -
Aev09g2699 603 Pfam Helix-loop-helix DNA-binding domain 347 390 IPR011598 GO:0046983
Aev09g2699 603 Gene3D - 329 405 IPR036638 GO:0046983
Aev09g2699 603 MobiDBLite consensus disorder prediction 183 213 - -
Aev09g2699 603 MobiDBLite consensus disorder prediction 311 351 - -
Aev09g2699 603 MobiDBLite consensus disorder prediction 232 275 - -
Aev09g2699 603 CDD bHLH_AtAMS_like 343 405 - -
Aev09g2699 603 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 9 152 IPR025610 -
Aev09g2699 603 Coils Coil 379 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2699 Aev-Chr9 27874697 27877049 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2699 6 581 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G16910 45.548 6.25e-141 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev09g2699 bHLH-MYC_N 5e-18 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2699 - - aprc:113871920 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2699 09 27874697 27877049 Aev09g2699 09 27874697 27877049 ECH