Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2696 ATGTCTTCCCGAGGCAGGGCTCTTCCTCACCCCATTCACTTTTTTCAGATTATTGGCGAGAACACCCTGCTTAATGGACACCTGAGGATTCCAAGAAGTTTTGTGAGCAAACATTGGGAGGGAATATCAAACCCAATATTCCTTGTGCTTCCTAACGATGCCAAATGGGAAATGAAGTGGGAAAAAAGTGGTGTTGACGTTTGGTTAGTCAATGGTTGGAGGAAATTCGCAGAGTTTTATTCCTTATACAAGGATCAGTTTTTGGTGTTCAAATACGAAGAAGCTCTAGGGAAGTCACGGTTCGAGGTTAGGATATGCCATCGCAGCGCCTTAGAAATCGAGTACCCTTCCTCCAATCGAGATTCTAACGGTGGCGGTGAGGACAGTGATAACTCCATTGAAATCCTTGATGGAACTTCATCTTCACATCGTAGGAAAAGGTCCAAATCTCCACTGCCTCATTTTCATTCCTCCAAGAAGAAGAAAGTTAACCCAACAGAGGATCCTAATCACCATCCCAGCCAACATATTGAAACTGAATGCGCTCAACCTAGTGGCACAAAGCTTGAGAAGAAAAAGTCCTATGCAGATTCTGATAATGCAACAAGGCCAAAGAATAAAGGTGGAAGAGGAATATTCTCGAAACATGAGGCTCTTAACAATGAGGAGGCAATAGAAGATACTGAGAGTAGCTCAGCTATGCAGAGAGCCAAGGCTTTCACCTCTCACAATCCTTGGTTCATTCGTAAAGTACGACCAACTCACATTCACAAACCTTATCTGACCATACCAGCCAAATATATAACAGAACAAGGACAAGAGGAGATAAATAGTATTACTCTTTGGGTTTCTGATGGAAGAAGTTGGATTAGCATGTTCAGCAGGAAGAGTAGCAGTGGACAAATAGGGGTTAGAAGTGCTTGGAGCAGGTTTGTAAAGGACAATAACTTGAAACTAGGTGATGTTTGTGTTTTTGAGAAAACTGAATGCAGGGGAAATTCTTTTAGAGTTGTTATCTTCCGTGCCACAGAAGAATCGACCCCTCCTCTACCTCAAGCTTCTAAAAGTCATAGATATAGCTGCATAGTGCCAGAGGATCATTTCACCCTCACTTTAAAGGCTTCTCAATTGAGTTCTACGTTTTTACCCCGAGGCTTCGTTAGAAACTATGTTGATGGTGATCAACATGTGACACTGCTTGTTGGGGAGAGGTCATGGAAGGTGAGACTAGACCATTATCCAATGCACGGCAAGGCAAGGTTATCTAAGGGTTGGGGTACATTTGTGAAGGAATGTGACTTGAAAGCAGGAGATAATTGCTTCTTTCAACTCATAGATAGGGAAAATCTTGTGTTTCAAGTTAAGTTTCAAGATGCATCCACTAACTTGTAA 1392 0.4231 MSSRGRALPHPIHFFQIIGENTLLNGHLRIPRSFVSKHWEGISNPIFLVLPNDAKWEMKWEKSGVDVWLVNGWRKFAEFYSLYKDQFLVFKYEEALGKSRFEVRICHRSALEIEYPSSNRDSNGGGEDSDNSIEILDGTSSSHRRKRSKSPLPHFHSSKKKKVNPTEDPNHHPSQHIETECAQPSGTKLEKKKSYADSDNATRPKNKGGRGIFSKHEALNNEEAIEDTESSSAMQRAKAFTSHNPWFIRKVRPTHIHKPYLTIPAKYITEQGQEEINSITLWVSDGRSWISMFSRKSSSGQIGVRSAWSRFVKDNNLKLGDVCVFEKTECRGNSFRVVIFRATEESTPPLPQASKSHRYSCIVPEDHFTLTLKASQLSSTFLPRGFVRNYVDGDQHVTLLVGERSWKVRLDHYPMHGKARLSKGWGTFVKECDLKAGDNCFFQLIDRENLVFQVKFQDASTNL* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2696 463 MobiDBLite consensus disorder prediction 145 159 - -
Aev09g2696 463 CDD B3_DNA 367 456 IPR003340 GO:0003677
Aev09g2696 463 Gene3D - 10 110 IPR015300 -
Aev09g2696 463 MobiDBLite consensus disorder prediction 116 221 - -
Aev09g2696 463 SUPERFAMILY DNA-binding pseudobarrel domain 12 107 IPR015300 -
Aev09g2696 463 MobiDBLite consensus disorder prediction 116 138 - -
Aev09g2696 463 SUPERFAMILY DNA-binding pseudobarrel domain 367 454 IPR015300 -
Aev09g2696 463 PANTHER B3 DOMAIN-CONTAINING 10 342 - -
Aev09g2696 463 ProSiteProfiles B3 DNA-binding domain profile. 246 343 IPR003340 GO:0003677
Aev09g2696 463 ProSiteProfiles B3 DNA-binding domain profile. 365 460 IPR003340 GO:0003677
Aev09g2696 463 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 10 342 - -
Aev09g2696 463 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 364 456 - -
Aev09g2696 463 ProSiteProfiles B3 DNA-binding domain profile. 13 109 IPR003340 GO:0003677
Aev09g2696 463 CDD B3_DNA 13 106 IPR003340 GO:0003677
Aev09g2696 463 Pfam B3 DNA binding domain 375 457 IPR003340 GO:0003677
Aev09g2696 463 Pfam B3 DNA binding domain 22 108 IPR003340 GO:0003677
Aev09g2696 463 Pfam B3 DNA binding domain 249 342 IPR003340 GO:0003677
Aev09g2696 463 SUPERFAMILY DNA-binding pseudobarrel domain 242 344 IPR015300 -
Aev09g2696 463 MobiDBLite consensus disorder prediction 160 175 - -
Aev09g2696 463 CDD B3_DNA 247 341 IPR003340 GO:0003677
Aev09g2696 463 Gene3D - 225 345 IPR015300 -
Aev09g2696 463 Gene3D - 352 460 IPR015300 -
Aev09g2696 463 PANTHER B3 DOMAIN-CONTAINING 364 456 - -
Aev09g2696 463 MobiDBLite consensus disorder prediction 185 221 - -
Aev09g2696 463 SMART B3_2 247 343 IPR003340 GO:0003677
Aev09g2696 463 SMART B3_2 368 458 IPR003340 GO:0003677
Aev09g2696 463 SMART B3_2 14 109 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2696 Aev-Chr9 27853244 27855353 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2696 368 454 B3 DNA Binding Superfamily AT3G18990 31.868 7.16e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev09g2696 B3 4.5e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2696 - - aprc:113871918 372.474