Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2695 ATGTCTTCCAAAGAAAGGGCTCTTCCTCTCCCAATTCACTTTTTCCAGATTATTGGCGAAAACACCCTTCTTAATGGAGACCTGATGATTCCTAGAAGCTTTGTGAGCAAACATTGGGAAGGAATATCAAACCCAATACTCCTTGTGCTTCCTAACGATGCAAAATGGGAAATGAAGTGGGAAAAACGCGGTGTTGACGACCTTTGGTTAGTCAATGGTTGGAGGAAATTCGCAGAGTTTTATTCCTTATGCAAGGATCAGTTTTTGATGTTCAAATACGAAGAAGCTCTAGGGAAGTCACGGTTCGAGGTTAGGATATGTCATCGCAGCGCCTTAGAAATCGATTACCCTTCGTCTAATCGAGATTCTAACGGTGGTGGTGAAGACAGTGATAACTCCATTGAAATCCTTGATGGAACTTCATCTTCACATCGTAGAAAAAGGTCCAAATCTCCATTACCTCATTTTCATTCCTCCAAGAAGAAGAAGAAAGTTAACCCAACAGAGGATCCTCATCACCATCCCAGCCAACATGTTGAAACTGAATCTGCTCAACCTAGTGGCACAAACAATGAGAAGAAAAAATCCTATGGGGATTCTGATAATGCAACAAGGCCAAAGAATAAAGGTGGAAGAGGAATGTTCAGTGAGGAGGCAATAGAAGATACAGAGAGTAGCTCAGCGATGCAGAGAGCCAAGGCTTTCACCTCTCACAATCCTTTCTTCATTCGTAAAATGCGACAAACTCACATCCATAAACCTTTTCTGACCATACCAGACATATATATAACACAAGAAGAAGAAGAAGAAGAAGAGGAGAGAAAAAGTATTACTTTTTGGGTTTCTGATGAGAGAAGTTGGAGTGGCAGGTACAGCAGGAATAGTTGCAATGGACAAATAGGGGTTACAATGGCTTGGAAGAGCTTTGTACAGGACAATCACTTGAAATTAGGTGATGTTTGTGTATTTGAGAGATCTGAATGCAGAGGAAATTCATTTAGAGTTGTCATTTTCCGTGACACAGAAGAATCGACCCCTCCTCCACCTCAAGATGGATCAGCAAACCCAAGAAAACAAAGTGTTAGAGACAATTTGGCTCAGTGCCCAAAGACTCATCTCTATAACGATTCTAAAAGTCATAGATATGACTGCAAAATGACAGATGATCATTTCACCCTCACTTTAAAGCCGTGCCAAATGAAGAGTGCTACGCATTTACCCAGAAGCTTCGTGAGAAAATATGTTGATAGTGATCATCAACATGTGACACTGCGTGTTGGGGAGAGATCATGGAAGGTGAGGCTAGACTATTATCCAAAGCATGGCAATGCAAGATTCTCTGAGGGATGGCCCCTATTCGTGAAGGAATGTGACTTGAAAGCAGGGGATGATTGTTCCTTTCAAGTGATAGATAATAGGGAAAATCTTGTGATCCAAGTTAGAGTTTCAAGACGCATCCACTGA 1464 0.4153 MSSKERALPLPIHFFQIIGENTLLNGDLMIPRSFVSKHWEGISNPILLVLPNDAKWEMKWEKRGVDDLWLVNGWRKFAEFYSLCKDQFLMFKYEEALGKSRFEVRICHRSALEIDYPSSNRDSNGGGEDSDNSIEILDGTSSSHRRKRSKSPLPHFHSSKKKKKVNPTEDPHHHPSQHVETESAQPSGTNNEKKKSYGDSDNATRPKNKGGRGMFSEEAIEDTESSSAMQRAKAFTSHNPFFIRKMRQTHIHKPFLTIPDIYITQEEEEEEEERKSITFWVSDERSWSGRYSRNSCNGQIGVTMAWKSFVQDNHLKLGDVCVFERSECRGNSFRVVIFRDTEESTPPPPQDGSANPRKQSVRDNLAQCPKTHLYNDSKSHRYDCKMTDDHFTLTLKPCQMKSATHLPRSFVRKYVDSDHQHVTLRVGERSWKVRLDYYPKHGNARFSEGWPLFVKECDLKAGDDCSFQVIDNRENLVIQVRVSRRIH* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2695 487 CDD B3_DNA 390 481 IPR003340 GO:0003677
Aev09g2695 487 CDD B3_DNA 13 107 IPR003340 GO:0003677
Aev09g2695 487 ProSiteProfiles B3 DNA-binding domain profile. 13 110 IPR003340 GO:0003677
Aev09g2695 487 SUPERFAMILY DNA-binding pseudobarrel domain 390 483 IPR015300 -
Aev09g2695 487 Gene3D - 11 111 IPR015300 -
Aev09g2695 487 PANTHER B3 DOMAIN-CONTAINING 11 340 - -
Aev09g2695 487 MobiDBLite consensus disorder prediction 340 362 - -
Aev09g2695 487 Gene3D - 220 343 IPR015300 -
Aev09g2695 487 Gene3D - 375 486 IPR015300 -
Aev09g2695 487 MobiDBLite consensus disorder prediction 116 214 - -
Aev09g2695 487 MobiDBLite consensus disorder prediction 163 179 - -
Aev09g2695 487 ProSiteProfiles B3 DNA-binding domain profile. 241 341 IPR003340 GO:0003677
Aev09g2695 487 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 383 484 - -
Aev09g2695 487 SMART B3_2 14 110 IPR003340 GO:0003677
Aev09g2695 487 SMART B3_2 242 341 IPR003340 GO:0003677
Aev09g2695 487 SMART B3_2 390 484 IPR003340 GO:0003677
Aev09g2695 487 SUPERFAMILY DNA-binding pseudobarrel domain 237 340 IPR015300 -
Aev09g2695 487 CDD B3_DNA 240 339 IPR003340 GO:0003677
Aev09g2695 487 MobiDBLite consensus disorder prediction 146 162 - -
Aev09g2695 487 Pfam B3 DNA binding domain 404 481 IPR003340 GO:0003677
Aev09g2695 487 Pfam B3 DNA binding domain 22 109 IPR003340 GO:0003677
Aev09g2695 487 Pfam B3 DNA binding domain 242 339 IPR003340 GO:0003677
Aev09g2695 487 ProSiteProfiles B3 DNA-binding domain profile. 406 484 IPR003340 GO:0003677
Aev09g2695 487 MobiDBLite consensus disorder prediction 194 214 - -
Aev09g2695 487 PANTHER B3 DOMAIN-CONTAINING 383 484 - -
Aev09g2695 487 MobiDBLite consensus disorder prediction 116 139 - -
Aev09g2695 487 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 11 340 - -
Aev09g2695 487 SUPERFAMILY DNA-binding pseudobarrel domain 13 108 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2695 Aev-Chr9 27850342 27852528 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2695 387 484 B3 DNA Binding Superfamily AT3G18990 32.000 3.86e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aev09g2695 B3 1.8e-13 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2695 - - ahf:112712192 369.777