Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2684 ATGGCACAATCAAATTCATCAGCATCATCGCTTTTTGGATTCAGAGGAGAAGATCAGAATCAGATGAAGGAACAGCATTCCTTATTGCCACCATCGTCTTCAACAGCCCCAGCTGCACCACCACCTCAGAAGAAAAAAAGAAACCAACCTGGAACACCAAGCAAATCCAGATGCGGAGGTGATAGCACTATCTCCGAAGACCCTAATGGCAACAAACAGAAGAGTACAAAAGAGCCAAAGAGAAAGGTTTATCTGTGTCCTGAGCCCACATGCGTCCACCACGACCCTTCAAGGGCTCTCGGTGACCTCACTGGCATCAAGAAGCACTACTCTCGCAAGCACGGCGAGAAGAAGTGGAAGTGTGACAAGTGCTCCAAGAAATACGCCGTTCAGTCTGATTGGAAGGCTCACTCTAAGACTTGCGGCACTCGCGAATACCGATGTGACTGTGGCACCCTCTTCTCCAGGAGGGACAGTTTCATCACGCACAGGGCATTCTGTGATGCACTTGCTCAAGAAAGTGCAAGACAACCACCCAACCTGAGCAGTGCAATTGGGAGCCACCTATATGGAGGCAGCAATAGCAACAACAACAACAACATGGCTCTAGGCCTATCCCAAGTGGGCCCCCACATAGGCACCATGCAAGACCACACCACCCAATCTGACCTTTTGCGTCTCGGATCAGCCGGTCGAGCAGCAACTCATCACCATCAATTAGATCATCACATCCTCCCACCATCCTTAATTAGACCCTCACCACATCACCACCAGACAATTCCCACATCACCAGCCTCCAACAATATTGTTGTTAGCAGTGGCGGGATGTGTCACATGTCAGCAACTGCACTCCTTCAGAAAGCAGCACAAATGGGTGCAACTTCCTCAACCAATAACGGCACTGCATCGTTGCTCAAGAGCTTCGGAAGCGCTTCCTCTAGCAGCGGATCAAAACCACCTGAACTCCATCATCATCATCAGATCAAGCCAATGCTTAATAACTACAGTAGCATTTTTGGGAATAATGAACAGGGGAACCTGCAGGATCTAATGAATTCATTTGCTGCTGCTGGAAATAACCCAGCTTCCGGTATCTTCGAGAGTGCAGGAGGGTCTACCGTAGGGATCACTGGGTTTGAAGCATACGATCATGGCTCCTCAAATAGGGACCCCAAAATGCAGGGAACAGTGGGAATCGGAGGAGCAGGATCTGATAGGCTCACTAGGGATTTTCTTGGTGTTGGTCAAATTGTGAGAAGCATGAGCGGTGTTGGTGGTGGACAGAGAGAACAACAACAACAACAACATGGATTCAACTTGACCTCTACTTTGGAGGCAGAAAGAAGTAATGCTGCTGCGCCTTCAGCCCAATCTTTTGGTGGTGGTGCTGGGAGTTTTCAGTGA 1404 0.4915 MAQSNSSASSLFGFRGEDQNQMKEQHSLLPPSSSTAPAAPPPQKKKRNQPGTPSKSRCGGDSTISEDPNGNKQKSTKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARQPPNLSSAIGSHLYGGSNSNNNNNMALGLSQVGPHIGTMQDHTTQSDLLRLGSAGRAATHHHQLDHHILPPSLIRPSPHHHQTIPTSPASNNIVVSSGGMCHMSATALLQKAAQMGATSSTNNGTASLLKSFGSASSSSGSKPPELHHHHQIKPMLNNYSSIFGNNEQGNLQDLMNSFAAAGNNPASGIFESAGGSTVGITGFEAYDHGSSNRDPKMQGTVGIGGAGSDRLTRDFLGVGQIVRSMSGVGGGQREQQQQQHGFNLTSTLEAERSNAAAPSAQSFGGGAGSFQ* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2684 467 Gene3D Classic Zinc Finger 97 176 - -
Aev09g2684 467 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 72 267 - -
Aev09g2684 467 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 5 54 - -
Aev09g2684 467 MobiDBLite consensus disorder prediction 1 79 - -
Aev09g2684 467 MobiDBLite consensus disorder prediction 48 70 - -
Aev09g2684 467 MobiDBLite consensus disorder prediction 1 16 - -
Aev09g2684 467 MobiDBLite consensus disorder prediction 444 467 - -
Aev09g2684 467 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 72 267 - -
Aev09g2684 467 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 273 429 - -
Aev09g2684 467 PANTHER ZINC FINGER PROTEIN, PUTATIVE-RELATED 5 54 - -
Aev09g2684 467 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 273 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2684 Aev-Chr9 27784419 27789008 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2684 278 437 IDZ Gene Family AT2G02070 40.556 2.38e-10 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev09g2684 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2684 K25870 - gmx:100786121 391.734