Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2673 ATGGCTATGGACACCTCAAATCCTGCTGCGTTTGTAAATGCCGAATTGCTCCCCAATTTCATAGGTAAGAAAGTACGAACAGTGGTTCAGGTGAATCATTGTGATGGCGGTGTAACAGCAGCAAAATCCACAGATGAGAAACAGCTATCTGTGAAAGGGTTGCCATCGGTCCCTCTTATGAACTATGTCGAGATCATTGGAATTGCTGAGAGTAACCATTCTATTAATGCTGAAATATGGACAGACTTTGGCAGCACCTTCGTTATGCCAACTAGCAAACGGGGAATTCAGAAGCCTGTTTCTCTAAGGGAGGACATTCAACAGAGTGCTGGATCTAAGATTGGATGGTATGGATTACGATGTTGCAGCTTGCATGCTTTAGCACTTAGGATGTAA 396 0.4369 MAMDTSNPAAFVNAELLPNFIGKKVRTVVQVNHCDGGVTAAKSTDEKQLSVKGLPSVPLMNYVEIIGIAESNHSINAEIWTDFGSTFVMPTSKRGIQKPVSLREDIQQSAGSKIGWYGLRCCSLHALALRM* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2673 131 Gene3D - 3 104 IPR012340 -
Aev09g2673 131 Pfam Replication factor A protein 3 3 98 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Aev09g2673 131 SUPERFAMILY Nucleic acid-binding proteins 7 85 IPR012340 -
Aev09g2673 131 PANTHER NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN 3 88 - -
Aev09g2673 131 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 3 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2673 Aev-Chr9 27725484 27726562 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2673 3 87 Core DNA Replication Machinery Family AT4G18590 56.471 4.26e-31 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2673 K10740 - gmx:100781484 148.673