Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2665 ATGATGTTTCAGGAGACCGCCCACACGGCAGCCACCGTGACACGGTGGCCGACTCAGTGGACTCGGGAGCAGGACAAGCTCTTCGAGGCGGCTCTGCTCTTCGTGCCGGAGGGGATGCCGGACCGCTGGGACAGGATCGCCGACCGTGTTCCCGGTAAGTCCGCCGCGGACGTCAGGGACCGCTATCAGGAACTCGTTCGCGACGTCTTCGACATAGACTCGGGACGAGTCGAGGTGCCTAGCTACGCTGATGATCCGGCGAGTTCTGGTGGTGGCGGAGGGTCGCCTTCTTGGGACTCTGCTAATCAGATCTCCTTCGGGTCAAAGCCTAAGCAGAGCGACACCGAGAGGAAGAAAGGCACGCCCTGGAGCGAAGAGGAACACAGGCTATTTCTAATTGGGCTCAACAAATTTGGTAAGGGGGATTGGAGAAGCATTTCAAGGAACGTAGTTGTGACAAGAACACCAACCCAAGTGGCTAGCCATGCCCAGAAGTACTTCCTTCGCCAGAGTTTGACCTCTGTGAAGAAAGAGAGGAAAAGGTCAAGCATACATGACATAACCACTGTGGACAGTAACTCAGTGCCTGTGCCCATGGATCAGAATTGGGTTCCTCCTCCTGCTGGCCAAATGCAAATGCAGCAGTCGCAACAAGAAATGCAGATGCAAATGCAGCAGCAGCAAGAAATGCAGATGCAGCAGTTCAATTCTCCAAACAATTTGGTGGGTGGGTTTGGGTATCCAAACTATGCTGGTTATTGA 762 0.5433 MMFQETAHTAATVTRWPTQWTREQDKLFEAALLFVPEGMPDRWDRIADRVPGKSAADVRDRYQELVRDVFDIDSGRVEVPSYADDPASSGGGGGSPSWDSANQISFGSKPKQSDTERKKGTPWSEEEHRLFLIGLNKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQSLTSVKKERKRSSIHDITTVDSNSVPVPMDQNWVPPPAGQMQMQQSQQEMQMQMQQQQEMQMQQFNSPNNLVGGFGYPNYAGY* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2665 253 Gene3D - 15 79 - -
Aev09g2665 253 SMART sant 119 169 IPR001005 -
Aev09g2665 253 SMART sant 16 68 IPR001005 -
Aev09g2665 253 ProSiteProfiles Myb-like domain profile. 115 167 IPR001005 -
Aev09g2665 253 MobiDBLite consensus disorder prediction 78 123 - -
Aev09g2665 253 MobiDBLite consensus disorder prediction 93 110 - -
Aev09g2665 253 ProSiteProfiles Myb-like domain profile. 20 66 IPR001005 -
Aev09g2665 253 CDD SANT 20 66 IPR001005 -
Aev09g2665 253 PANTHER SYRINGOLIDE-INDUCED PROTEIN 1-3-1B 17 235 - -
Aev09g2665 253 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 118 170 IPR006447 GO:0003677
Aev09g2665 253 CDD SANT 122 167 IPR001005 -
Aev09g2665 253 ProSiteProfiles SANT domain profile. 118 171 IPR017884 -
Aev09g2665 253 Gene3D - 121 172 - -
Aev09g2665 253 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 115 171 IPR017930 -
Aev09g2665 253 Pfam Myb-like DNA-binding domain 19 65 IPR001005 -
Aev09g2665 253 Pfam Myb-like DNA-binding domain 122 167 IPR001005 -
Aev09g2665 253 SUPERFAMILY Homeodomain-like 116 170 IPR009057 -
Aev09g2665 253 Coils Coil 213 233 - -
Aev09g2665 253 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 17 235 IPR043363 -
Aev09g2665 253 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2665 Aev-Chr9 27692759 27694477 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev09g2665 Myb_DNA-binding 6.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2665 - - adu:107467340 345.125