Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2566 ATGCTCAACAAGGATGCTTGCTCTCCCTCCTCAAATGGCGGATTTGGCGCCAACACCGCTGGCAGCGGCGGAGGTCAAATGCAGTCAAACGGCGGCGCCTTAGCTTCCTTCTACTCCGCTCTGCTGAACGACAATCCGTCGCTCTCTGCGAACAGCAGCAACGGCGGCGGCGTCTCACTCTACCAGTACTCTGACTCGGGGACTCAGATCAACTCGTACGACTCGTGCGTCATTCAGAAGCACCAGGACATGGTGAATCGCCAAAGCATGTGCCTCAATCGCCTCTTGGAAACTTCCAAGGAGGTTGAAGCTCTGCGCCAAGAGAACGCGCACCTACGCACATTGAACAAGGAGCTCCAGAAGCAGCTCAACTTCGTCGTCCAGGCTTCGCTGGAGAACCAATTTGGCGGAGGAACCTCCGTGGAGAGGTTCTCGCTGCCGAAGAGCATATCTGTCAGGTCAAATGGCTACCTGAAGATGGCTCAGTCTGCGGTCACTGTAACCAACACCAACACTACTGCCTGTCGCACCAAAGGGTCTACTCGCCCACGCGCCTCATCCACTCCATCTGATGCCGTTCAAAAGGTATATGTGCGTGGAGGGAAGACAGAGGAAGAGCCTCTTGAGATGGTGGTGTATAACCAAGGGATGTTCAAGACTGAGCTGTGTAACAAATGGCAGGAAACTGGAACATGCCCATATGGAGATCACTGCCAATTCGCTCACGGTATTGGAGAGCTTCGCCCAGTCATCCGCCACCCACGCTACAAAACTGAGGTCTGCAGGATGGTCCTTGCTGGTGTTGTATGCCCATATGGCCACAGATGCCATTTCCGCCACGCACTCACTGAACAAGAGAAAGCTTTATCACAGCCTAAGCCCAGATCAATGAAGCTGGAAAGATAA 906 0.5386 MLNKDACSPSSNGGFGANTAGSGGGQMQSNGGALASFYSALLNDNPSLSANSSNGGGVSLYQYSDSGTQINSYDSCVIQKHQDMVNRQSMCLNRLLETSKEVEALRQENAHLRTLNKELQKQLNFVVQASLENQFGGGTSVERFSLPKSISVRSNGYLKMAQSAVTVTNTNTTACRTKGSTRPRASSTPSDAVQKVYVRGGKTEEEPLEMVVYNQGMFKTELCNKWQETGTCPYGDHCQFAHGIGELRPVIRHPRYKTEVCRMVLAGVVCPYGHRCHFRHALTEQEKALSQPKPRSMKLER* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2566 301 ProSiteProfiles Zinc finger C3H1-type profile. 255 283 IPR000571 GO:0046872
Aev09g2566 301 Gene3D - 251 287 - -
Aev09g2566 301 Gene3D - 212 250 - -
Aev09g2566 301 MobiDBLite consensus disorder prediction 1 26 - -
Aev09g2566 301 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 218 243 IPR000571 GO:0046872
Aev09g2566 301 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 15 49 294 - -
Aev09g2566 301 SMART c3hfinal6 217 244 IPR000571 GO:0046872
Aev09g2566 301 SMART c3hfinal6 255 282 IPR000571 GO:0046872
Aev09g2566 301 ProSiteProfiles Zinc finger C3H1-type profile. 217 245 IPR000571 GO:0046872
Aev09g2566 301 PANTHER CCCH ZINC FINGER/TIS11-RELATED 49 294 IPR045877 GO:0003729
Aev09g2566 301 Coils Coil 95 122 - -
Aev09g2566 301 SUPERFAMILY CCCH zinc finger 214 249 IPR036855 GO:0046872
Aev09g2566 301 SUPERFAMILY CCCH zinc finger 251 285 IPR036855 GO:0046872
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2566 63 299 C3H Transcription Factor Family AT1G68200 48.276 2.99e-75 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Aev09g2566 zf-CCCH 2.3e-12 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2566 K18753 - gmx:100796550 298.901