Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev09g2531 | ATGCTAGGTTCATTGCCGATACTGCCCCTCCCTGCTCCTCCTGCTGATGGAAATCTTGGTCCTCTCCCTGAGTCTCAAGTCTCTGAGGAGGAGATATCTTCCAATGGGGAGCAGAACAAATCGAACTCTGCTCCAGCACCAGCAACTGTTGCTACCCACACAAGAACTATTGGAATTATACATCCCCCTCCAGACATTAGGACCATTGTTGATAAAACCTCCCAGTTTGTTGCCAAGAATGGTCCAGAGTTCGAAAAGAGGATTATTGCAAATAACACAGGCAATGTCAAGTTTAATTTCCTGAACTCATCAGATCCTTATCATGCATACTATCAACACAGGCTGGCTGAATTTCGTGCTCAGAATCAGTCTTCTGGTTTGCAACCTCCTTCACTGCCTGCAGACTCAGCTGCTCCTGAATCAGTCCCATCTGCACCAGCCTCTGATAGCAATGGTGTAGCTGCAGTAGAAAAGCCTGATATTTCTGCCCAGTTTAAGCCTGTGAAGAAAGTTCTTGAACCCCCAGAAGCCGAACAGTACACGGTTCGGCTTCCTGAAGGAATTACAGGTGAAGAGCTAGATATTATAAAGCTTACAGCACAGTTTGTGGCTCGAAATGGGAAATCATTTTTGACAGGACTAACAAGTAGGGAAGTTAATAACCCCCAATTCCATTTCTTGAAACCAACTCACAGCATGTTTACCTTTTTCACTTCTCTTGCGGATGCATACTCAAAGGTTTTGATGCCTCCAAAGGGTTTGACAGAGAAGCTCAAGAAGAGTGTCTCTGACATGACTACCGTCCTTGAAAGGTGCGTGAACAGGCTTGAATGGGAGCGTTCACAAGAGCAAGCCAGGCAAAAGGCAGAGGATGAGATAGAGCAGGAAAGGATACAAATGGCCATGATTGATTGGCATGATTTTGTGGTTGTTGAGACAATAGACTTTGCTGACGATGAGGATGAAGAATTGCCTCCGCCAATGACCATTGAGGAGGTTATCAGGAGAAGCAAAGTGACTGCTATGGAAGAAGATATTGTTGAGCCAGGAAAGGAGGTCGAAATGGAAATGGATGAAGAGGAGGCACAGCTTGTTGAAGAGGGCATGAGAGCTGCTAGTTTAGAAGACAATGATGATGTGAAGAAGAATGAAGTCAGGGTTACTGAAGACCCTGAACCACCAATGAAGATTGTGAAGAACTGGAAGAGGCCGGAGGAGAGGATTGCTGCAGAAAGAGATGCGACCAAGTTTGTTGTTTCTCCCATCACTGGTGAGCTGATTCCTATCAGTGAAATGTCGGAACACATGCGAATTTCTCTCATTGATCCCAAGTACAAGGAACAAAAAGAAAGGATGTTTGCCAAAATTCGAGAGACAACTCTGGCACAGGATGATGAAATCTCAAGAAACATTGTTGGACTTGCTAGAACCCGTCCTGATATCTTTGGTACCACAGAAGAGGAGGTTTCTAATGCTGTCAAGGCAGAGATTGAGAAGAAAAATGACGAGCAACCTAAGCAAGTTATATGGGATGGTCACACCGGTAGTATTGGGCGTACTGCAACCCAAGCCTCACAGAATATTGGCAGTGAGGATCCAAATGATGCTGCTAATAATGAAGCCAAGAATCTTCCAGGCCCTGCAGCACCTCCTCCTAGGCCTGGCATGCCTATGGTTCGTCCTCTTCCACCACCACCTGGATTAGCATTGAATCTTCCTCGTGTTCCTCCCAATATCCTCCAATATTCTGCGCCTAACAGTGTTGGACTTTCTATACCTCCGCCTAGACCATCAATGCCCATGATGCCACCTAGACCAATGTCAGCCCCACCCCCTCCTATGCAAATGACTTCTGGCCCGCAGCCAGTTATGGCTGGTCAACCGCCTCCAATGCCTCCATCAATACCTATGAATAGCCAAGGAATTCACATACCTCCACCACCAGGATCTCAGTTCACTCCTATTCCAGTTCACCGACCTTACGTTCCTCTCTCTGTTCCACCATCAGGTATGCCTATGATGCATCCTCCACCTTTGCCTCAGGGAATGCCACCTCCACCACCTCCCGAAGAAGCTCCTCCCCCGCTTCCCGAAGAACCGGAGCCGAAGAGGCAGAAGCTTGATGATTCTGCTCTAATCTCCGAAGATCAATTTTTGGCTCAACATCCGGGACCTGTACACATCAGTGTATCTGTTCCAAATCTTGATGAAGGAAATCTTAAAGGGCAGGTTCTGGAAATTGCAGTGCAATCTCTGTCTGAAACTGTTGGCAGTCTGAAGGAAAAAATTGCTGGGGAGATCCAGCTCCCTGCTAACAAGCAGAAATTGAGTGGAAAGCCAGGTTTTCTCAAGGATAATTTGTCTCTTGCCCATTACAATATTGGTGGAGGAGAAACACTCACTCTCACCTTAAGAGAGCGTGGTGGTAGAAAGAGATGA | 2439 | 0.4662 | MLGSLPILPLPAPPADGNLGPLPESQVSEEEISSNGEQNKSNSAPAPATVATHTRTIGIIHPPPDIRTIVDKTSQFVAKNGPEFEKRIIANNTGNVKFNFLNSSDPYHAYYQHRLAEFRAQNQSSGLQPPSLPADSAAPESVPSAPASDSNGVAAVEKPDISAQFKPVKKVLEPPEAEQYTVRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREVNNPQFHFLKPTHSMFTFFTSLADAYSKVLMPPKGLTEKLKKSVSDMTTVLERCVNRLEWERSQEQARQKAEDEIEQERIQMAMIDWHDFVVVETIDFADDEDEELPPPMTIEEVIRRSKVTAMEEDIVEPGKEVEMEMDEEEAQLVEEGMRAASLEDNDDVKKNEVRVTEDPEPPMKIVKNWKRPEERIAAERDATKFVVSPITGELIPISEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTEEEVSNAVKAEIEKKNDEQPKQVIWDGHTGSIGRTATQASQNIGSEDPNDAANNEAKNLPGPAAPPPRPGMPMVRPLPPPPGLALNLPRVPPNILQYSAPNSVGLSIPPPRPSMPMMPPRPMSAPPPPMQMTSGPQPVMAGQPPPMPPSIPMNSQGIHIPPPPGSQFTPIPVHRPYVPLSVPPSGMPMMHPPPLPQGMPPPPPPEEAPPPLPEEPEPKRQKLDDSALISEDQFLAQHPGPVHISVSVPNLDEGNLKGQVLEIAVQSLSETVGSLKEKIAGEIQLPANKQKLSGKPGFLKDNLSLAHYNIGGGETLTLTLRERGGRKR* | 813 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev09g2531 | 812 | MobiDBLite | consensus disorder prediction | 672 | 713 | - | - | |
Aev09g2531 | 812 | CDD | Ubl_SF3a120 | 725 | 805 | IPR035563 | - | |
Aev09g2531 | 812 | Coils | Coil | 279 | 299 | - | - | |
Aev09g2531 | 812 | ProSiteProfiles | SURP motif repeat profile. | 195 | 237 | IPR000061 | GO:0003723|GO:0006396 | |
Aev09g2531 | 812 | MobiDBLite | consensus disorder prediction | 523 | 555 | - | - | |
Aev09g2531 | 812 | MobiDBLite | consensus disorder prediction | 121 | 153 | - | - | |
Aev09g2531 | 812 | PANTHER | SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED | 162 | 812 | IPR045146 | GO:0003723|GO:0045292 | |
Aev09g2531 | 812 | PANTHER | SPLICING FACTOR 3A, PROTEIN | 162 | 812 | - | - | |
Aev09g2531 | 812 | Pfam | Ubiquitin family | 741 | 807 | IPR000626 | GO:0005515 | |
Aev09g2531 | 812 | Gene3D | Surp module | 188 | 246 | IPR035967 | GO:0003723|GO:0006396 | |
Aev09g2531 | 812 | PANTHER | SPLICING FACTOR 3A, PROTEIN | 7 | 115 | - | - | |
Aev09g2531 | 812 | PANTHER | SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED | 7 | 115 | IPR045146 | GO:0003723|GO:0045292 | |
Aev09g2531 | 812 | MobiDBLite | consensus disorder prediction | 27 | 49 | - | - | |
Aev09g2531 | 812 | MobiDBLite | consensus disorder prediction | 696 | 711 | - | - | |
Aev09g2531 | 812 | ProSiteProfiles | SURP motif repeat profile. | 69 | 111 | IPR000061 | GO:0003723|GO:0006396 | |
Aev09g2531 | 812 | MobiDBLite | consensus disorder prediction | 523 | 537 | - | - | |
Aev09g2531 | 812 | ProSiteProfiles | Ubiquitin domain profile. | 753 | 809 | IPR000626 | GO:0005515 | |
Aev09g2531 | 812 | Gene3D | - | 701 | 811 | - | - | |
Aev09g2531 | 812 | SMART | ubq_7 | 733 | 805 | IPR000626 | GO:0005515 | |
Aev09g2531 | 812 | SUPERFAMILY | Surp module (SWAP domain) | 170 | 245 | IPR035967 | GO:0003723|GO:0006396 | |
Aev09g2531 | 812 | SUPERFAMILY | Surp module (SWAP domain) | 40 | 119 | IPR035967 | GO:0003723|GO:0006396 | |
Aev09g2531 | 812 | SUPERFAMILY | Ubiquitin-like | 705 | 810 | IPR029071 | - | |
Aev09g2531 | 812 | SMART | surpneu2 | 193 | 246 | IPR000061 | GO:0003723|GO:0006396 | |
Aev09g2531 | 812 | SMART | surpneu2 | 67 | 120 | IPR000061 | GO:0003723|GO:0006396 | |
Aev09g2531 | 812 | Pfam | Surp module | 67 | 118 | IPR000061 | GO:0003723|GO:0006396 | |
Aev09g2531 | 812 | Pfam | Surp module | 193 | 244 | IPR000061 | GO:0003723|GO:0006396 | |
Aev09g2531 | 812 | Coils | Coil | 357 | 377 | - | - | |
Aev09g2531 | 812 | MobiDBLite | consensus disorder prediction | 672 | 695 | - | - | |
Aev09g2531 | 812 | Pfam | Pre-mRNA splicing factor PRP21 like protein | 262 | 476 | IPR022030 | - | |
Aev09g2531 | 812 | MobiDBLite | consensus disorder prediction | 1 | 49 | - | - | |
Aev09g2531 | 812 | MobiDBLite | consensus disorder prediction | 624 | 651 | - | - | |
Aev09g2531 | 812 | Gene3D | Surp module | 53 | 126 | IPR035967 | GO:0003723|GO:0006396 |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev09g2531 | 740 | 809 | Cytoplasmic Ribosomal Protein Gene Family | AT3G62250 | 38.571 | 5.91e-06 | 45.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev09g2531 | K12825 | - | gmx:100797261 | 1230.7 |