Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2531 ATGCTAGGTTCATTGCCGATACTGCCCCTCCCTGCTCCTCCTGCTGATGGAAATCTTGGTCCTCTCCCTGAGTCTCAAGTCTCTGAGGAGGAGATATCTTCCAATGGGGAGCAGAACAAATCGAACTCTGCTCCAGCACCAGCAACTGTTGCTACCCACACAAGAACTATTGGAATTATACATCCCCCTCCAGACATTAGGACCATTGTTGATAAAACCTCCCAGTTTGTTGCCAAGAATGGTCCAGAGTTCGAAAAGAGGATTATTGCAAATAACACAGGCAATGTCAAGTTTAATTTCCTGAACTCATCAGATCCTTATCATGCATACTATCAACACAGGCTGGCTGAATTTCGTGCTCAGAATCAGTCTTCTGGTTTGCAACCTCCTTCACTGCCTGCAGACTCAGCTGCTCCTGAATCAGTCCCATCTGCACCAGCCTCTGATAGCAATGGTGTAGCTGCAGTAGAAAAGCCTGATATTTCTGCCCAGTTTAAGCCTGTGAAGAAAGTTCTTGAACCCCCAGAAGCCGAACAGTACACGGTTCGGCTTCCTGAAGGAATTACAGGTGAAGAGCTAGATATTATAAAGCTTACAGCACAGTTTGTGGCTCGAAATGGGAAATCATTTTTGACAGGACTAACAAGTAGGGAAGTTAATAACCCCCAATTCCATTTCTTGAAACCAACTCACAGCATGTTTACCTTTTTCACTTCTCTTGCGGATGCATACTCAAAGGTTTTGATGCCTCCAAAGGGTTTGACAGAGAAGCTCAAGAAGAGTGTCTCTGACATGACTACCGTCCTTGAAAGGTGCGTGAACAGGCTTGAATGGGAGCGTTCACAAGAGCAAGCCAGGCAAAAGGCAGAGGATGAGATAGAGCAGGAAAGGATACAAATGGCCATGATTGATTGGCATGATTTTGTGGTTGTTGAGACAATAGACTTTGCTGACGATGAGGATGAAGAATTGCCTCCGCCAATGACCATTGAGGAGGTTATCAGGAGAAGCAAAGTGACTGCTATGGAAGAAGATATTGTTGAGCCAGGAAAGGAGGTCGAAATGGAAATGGATGAAGAGGAGGCACAGCTTGTTGAAGAGGGCATGAGAGCTGCTAGTTTAGAAGACAATGATGATGTGAAGAAGAATGAAGTCAGGGTTACTGAAGACCCTGAACCACCAATGAAGATTGTGAAGAACTGGAAGAGGCCGGAGGAGAGGATTGCTGCAGAAAGAGATGCGACCAAGTTTGTTGTTTCTCCCATCACTGGTGAGCTGATTCCTATCAGTGAAATGTCGGAACACATGCGAATTTCTCTCATTGATCCCAAGTACAAGGAACAAAAAGAAAGGATGTTTGCCAAAATTCGAGAGACAACTCTGGCACAGGATGATGAAATCTCAAGAAACATTGTTGGACTTGCTAGAACCCGTCCTGATATCTTTGGTACCACAGAAGAGGAGGTTTCTAATGCTGTCAAGGCAGAGATTGAGAAGAAAAATGACGAGCAACCTAAGCAAGTTATATGGGATGGTCACACCGGTAGTATTGGGCGTACTGCAACCCAAGCCTCACAGAATATTGGCAGTGAGGATCCAAATGATGCTGCTAATAATGAAGCCAAGAATCTTCCAGGCCCTGCAGCACCTCCTCCTAGGCCTGGCATGCCTATGGTTCGTCCTCTTCCACCACCACCTGGATTAGCATTGAATCTTCCTCGTGTTCCTCCCAATATCCTCCAATATTCTGCGCCTAACAGTGTTGGACTTTCTATACCTCCGCCTAGACCATCAATGCCCATGATGCCACCTAGACCAATGTCAGCCCCACCCCCTCCTATGCAAATGACTTCTGGCCCGCAGCCAGTTATGGCTGGTCAACCGCCTCCAATGCCTCCATCAATACCTATGAATAGCCAAGGAATTCACATACCTCCACCACCAGGATCTCAGTTCACTCCTATTCCAGTTCACCGACCTTACGTTCCTCTCTCTGTTCCACCATCAGGTATGCCTATGATGCATCCTCCACCTTTGCCTCAGGGAATGCCACCTCCACCACCTCCCGAAGAAGCTCCTCCCCCGCTTCCCGAAGAACCGGAGCCGAAGAGGCAGAAGCTTGATGATTCTGCTCTAATCTCCGAAGATCAATTTTTGGCTCAACATCCGGGACCTGTACACATCAGTGTATCTGTTCCAAATCTTGATGAAGGAAATCTTAAAGGGCAGGTTCTGGAAATTGCAGTGCAATCTCTGTCTGAAACTGTTGGCAGTCTGAAGGAAAAAATTGCTGGGGAGATCCAGCTCCCTGCTAACAAGCAGAAATTGAGTGGAAAGCCAGGTTTTCTCAAGGATAATTTGTCTCTTGCCCATTACAATATTGGTGGAGGAGAAACACTCACTCTCACCTTAAGAGAGCGTGGTGGTAGAAAGAGATGA 2439 0.4662 MLGSLPILPLPAPPADGNLGPLPESQVSEEEISSNGEQNKSNSAPAPATVATHTRTIGIIHPPPDIRTIVDKTSQFVAKNGPEFEKRIIANNTGNVKFNFLNSSDPYHAYYQHRLAEFRAQNQSSGLQPPSLPADSAAPESVPSAPASDSNGVAAVEKPDISAQFKPVKKVLEPPEAEQYTVRLPEGITGEELDIIKLTAQFVARNGKSFLTGLTSREVNNPQFHFLKPTHSMFTFFTSLADAYSKVLMPPKGLTEKLKKSVSDMTTVLERCVNRLEWERSQEQARQKAEDEIEQERIQMAMIDWHDFVVVETIDFADDEDEELPPPMTIEEVIRRSKVTAMEEDIVEPGKEVEMEMDEEEAQLVEEGMRAASLEDNDDVKKNEVRVTEDPEPPMKIVKNWKRPEERIAAERDATKFVVSPITGELIPISEMSEHMRISLIDPKYKEQKERMFAKIRETTLAQDDEISRNIVGLARTRPDIFGTTEEEVSNAVKAEIEKKNDEQPKQVIWDGHTGSIGRTATQASQNIGSEDPNDAANNEAKNLPGPAAPPPRPGMPMVRPLPPPPGLALNLPRVPPNILQYSAPNSVGLSIPPPRPSMPMMPPRPMSAPPPPMQMTSGPQPVMAGQPPPMPPSIPMNSQGIHIPPPPGSQFTPIPVHRPYVPLSVPPSGMPMMHPPPLPQGMPPPPPPEEAPPPLPEEPEPKRQKLDDSALISEDQFLAQHPGPVHISVSVPNLDEGNLKGQVLEIAVQSLSETVGSLKEKIAGEIQLPANKQKLSGKPGFLKDNLSLAHYNIGGGETLTLTLRERGGRKR* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2531 812 MobiDBLite consensus disorder prediction 672 713 - -
Aev09g2531 812 CDD Ubl_SF3a120 725 805 IPR035563 -
Aev09g2531 812 Coils Coil 279 299 - -
Aev09g2531 812 ProSiteProfiles SURP motif repeat profile. 195 237 IPR000061 GO:0003723|GO:0006396
Aev09g2531 812 MobiDBLite consensus disorder prediction 523 555 - -
Aev09g2531 812 MobiDBLite consensus disorder prediction 121 153 - -
Aev09g2531 812 PANTHER SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED 162 812 IPR045146 GO:0003723|GO:0045292
Aev09g2531 812 PANTHER SPLICING FACTOR 3A, PROTEIN 162 812 - -
Aev09g2531 812 Pfam Ubiquitin family 741 807 IPR000626 GO:0005515
Aev09g2531 812 Gene3D Surp module 188 246 IPR035967 GO:0003723|GO:0006396
Aev09g2531 812 PANTHER SPLICING FACTOR 3A, PROTEIN 7 115 - -
Aev09g2531 812 PANTHER SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED 7 115 IPR045146 GO:0003723|GO:0045292
Aev09g2531 812 MobiDBLite consensus disorder prediction 27 49 - -
Aev09g2531 812 MobiDBLite consensus disorder prediction 696 711 - -
Aev09g2531 812 ProSiteProfiles SURP motif repeat profile. 69 111 IPR000061 GO:0003723|GO:0006396
Aev09g2531 812 MobiDBLite consensus disorder prediction 523 537 - -
Aev09g2531 812 ProSiteProfiles Ubiquitin domain profile. 753 809 IPR000626 GO:0005515
Aev09g2531 812 Gene3D - 701 811 - -
Aev09g2531 812 SMART ubq_7 733 805 IPR000626 GO:0005515
Aev09g2531 812 SUPERFAMILY Surp module (SWAP domain) 170 245 IPR035967 GO:0003723|GO:0006396
Aev09g2531 812 SUPERFAMILY Surp module (SWAP domain) 40 119 IPR035967 GO:0003723|GO:0006396
Aev09g2531 812 SUPERFAMILY Ubiquitin-like 705 810 IPR029071 -
Aev09g2531 812 SMART surpneu2 193 246 IPR000061 GO:0003723|GO:0006396
Aev09g2531 812 SMART surpneu2 67 120 IPR000061 GO:0003723|GO:0006396
Aev09g2531 812 Pfam Surp module 67 118 IPR000061 GO:0003723|GO:0006396
Aev09g2531 812 Pfam Surp module 193 244 IPR000061 GO:0003723|GO:0006396
Aev09g2531 812 Coils Coil 357 377 - -
Aev09g2531 812 MobiDBLite consensus disorder prediction 672 695 - -
Aev09g2531 812 Pfam Pre-mRNA splicing factor PRP21 like protein 262 476 IPR022030 -
Aev09g2531 812 MobiDBLite consensus disorder prediction 1 49 - -
Aev09g2531 812 MobiDBLite consensus disorder prediction 624 651 - -
Aev09g2531 812 Gene3D Surp module 53 126 IPR035967 GO:0003723|GO:0006396
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2531 740 809 Cytoplasmic Ribosomal Protein Gene Family AT3G62250 38.571 5.91e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2531 K12825 - gmx:100797261 1230.7