Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2492 ATGTTGCTCACAGCGACAACACTAATGACAACTGAAACTGGAAGATTGACAAGCCTTAACGGCCGTACGACTGGAAAGATGCCAACACTTGAAGCTGGAACTGAACAATGTGAATTGTCAGAAAAATCACCTCAGGACAACGAACAAACTGGGCCTGCCACTGTGTTAACCAGCTCTGTTGTTGATGAAAAATCAAATCAAGATTCTAACAAAGCGACCGGGAGTTCTGTTATTCTACTGCCTGCACCACCACAACAAAACTTAGAGAAGGGTTATCAGACTGCAGAAGGTTCATGCCTTCAAGAAAGTGCCTTAGAACAAGTCCCTGTTCATTTATCTACTGATAAATCAGAAAATCAATGTCAGTCGTTCTCTCAGAACGTTACAAAAGTGCCAGGAGAAATAAGTGATGCAGTAACTGGTGTTCTTACTGAGGACCAAATGCTGTCCGTTTCTGCACAAGTGAACACTGGTTCTTCAAATGAAGTAAAGGATCCAGCTTCTGGAGATGTGAAAAGTATCAGTTCAAATGGTTTGGAAGGAAACTCTAATAGCACAACTCCTGTGCAGTTGAGGAGTAAGGGTAAAAAGAACTCAAAATTATTGAAGAAGAAGTATATGCTAAGGTCTATAGGAAGCAGTGATAGAGCTTTGCGGTCTAGGACACAGGAAAAACCTAAACCACCTGAGTCAAATACTAATTTGGTTGATGCTAATAATGATGAAGTGAAAAGGAAAAGTAGGAAGAAGAAGAAGAAGAAGAAGAGGGGAGAGGAAGGAGTGATTGATGAATTTACAAGAATCAGAGCTCGGTTAAGATATTTATTGAATCGAGTAAGCTATGAGCAAAGCTTGATTAATGCTTATTCTGGTGAGGGATGGAAGGGATACAGCATGGAAAAATTAAAGCCTGAAAAGGAGCTTCAACGGGCTAAGTCTGAGATACTTCGACGTAAATTGAAAATTAGGGATCTATTTCGAAATTTGGATTCGTTGTGTGCTGAAGGAAGGATTCCGGATTCTCTTTTTGATACTGAAGGAGAGATTGACAGTGAGGATATATTCTGTGCAAAATGCAGTACCAAAGACTTGAGCATTGATAATGACATAATTCTTTGTGATGGTGCTTGTGAACGCGGATTTCATCAGCGCTGCTTGAATCCTCCATTGTTAACTGAAAATATTCCACCTGGCGATGAGGGTTGGCTATGCCCAGGATGTGATTGCAAAGATGACTGCATTGATCTTGTGAACGACTCCTTGGGAACAAATCTCTCTCTTGAGGACTCCTGGGAGAGGGTCTTTCCGGAAGCAGCAGCAGCTGGAAATAATGTTGATAACAACCAGGGACTTCCTTCTGATGATTCTGATGATGATGATTATAATCCCGATGTCCCAGAAGATGTGGAAGCTGAAGACGGTGAATCAAGTTCTGATGAATCCGAGTATGCTTCTGCTTCTGAGAAGTTGGAGGATTCAAGCCACGAGGATCAATACATGGGCCTTCCTTCTGAAGATTCGGAGGATGATGACTATGATCCTGATGCTCCAGATCTTGACACTAGAGTCGCAGAGGAAAGTTCAAGCTCTGATTTCACTTCTGACTCAGAGGATCTTGCTGCTGCAATTAAAGATAACATGCCCCCTGGACAGGATGAAGATATTAAATCTGCATCGATGGATGATGTTAAAACCTTAAAAGGTTCTAATAGACAAAAATGCAAAGTCGGTAAGAAGCCATCTATGGCTGATGAATTGTCATCCTTACTTGAGCCAGATCCTGGCCAAGAGAGCTACACTCCTGTTTCTGGGAAAAGGAATGTGGAAAGGTTGGACTACAAAAAGCTATATGATGAGACATACAAAAGTGATACTAGTGATGATGAAGAATGGACTGACACTGCTACTCCAATTAGAAAGAAGAACCTCAATGGCAATGTGTCTCCAATGTCACCAAATAGGAAAGCCTCTAATAATTCTAGGAACCAGTTAAAAGTTGAAAATACAAATAATTCACCCACAAAATCACTTGAAGGCTCTGGGAAGTCTGGTACCAGGGATAAAAAACCAGGATCTTCAACAAACAAAAGACTTGGAGAAGCTGCGGTACAGAGACTTTACGAGCATTTTAAAGAAAATCAGTATCCAACCCGTCCTACAAAAGAAAAGTTGGCTCAAGAAGTTGGACTCACTTATCAGCAGGTTACCAAATGGTTCGACAATACCCGGTGGAGCTTCCGACATTCATCGTCTAAGGAAACCAACACTAATAAAAATGCTTCAGAACAGGCTACTGACAGTAAAGCTGAGAATGAGGGTGCCCCTGGTAGTGAGCAGAAGGACTGTACATTAGTGTCCGAAGAGGGCAGTGGGGAGAAATCAAAAACCCCAAGTTCTAGAAAAAGGAAGCAAATGTCCAAACCCCAAACATCTGAAGCATGTAAGGATGTTGATAGCGCAGCAACAACAATTCCTCCTGCTTGCTCACCAACAACTAATGAAATTCAAACTGGTCATAAAATGAAGACAAGGAGAAGAAAATGA 2544 0.4151 MLLTATTLMTTETGRLTSLNGRTTGKMPTLEAGTEQCELSEKSPQDNEQTGPATVLTSSVVDEKSNQDSNKATGSSVILLPAPPQQNLEKGYQTAEGSCLQESALEQVPVHLSTDKSENQCQSFSQNVTKVPGEISDAVTGVLTEDQMLSVSAQVNTGSSNEVKDPASGDVKSISSNGLEGNSNSTTPVQLRSKGKKNSKLLKKKYMLRSIGSSDRALRSRTQEKPKPPESNTNLVDANNDEVKRKSRKKKKKKKRGEEGVIDEFTRIRARLRYLLNRVSYEQSLINAYSGEGWKGYSMEKLKPEKELQRAKSEILRRKLKIRDLFRNLDSLCAEGRIPDSLFDTEGEIDSEDIFCAKCSTKDLSIDNDIILCDGACERGFHQRCLNPPLLTENIPPGDEGWLCPGCDCKDDCIDLVNDSLGTNLSLEDSWERVFPEAAAAGNNVDNNQGLPSDDSDDDDYNPDVPEDVEAEDGESSSDESEYASASEKLEDSSHEDQYMGLPSEDSEDDDYDPDAPDLDTRVAEESSSSDFTSDSEDLAAAIKDNMPPGQDEDIKSASMDDVKTLKGSNRQKCKVGKKPSMADELSSLLEPDPGQESYTPVSGKRNVERLDYKKLYDETYKSDTSDDEEWTDTATPIRKKNLNGNVSPMSPNRKASNNSRNQLKVENTNNSPTKSLEGSGKSGTRDKKPGSSTNKRLGEAAVQRLYEHFKENQYPTRPTKEKLAQEVGLTYQQVTKWFDNTRWSFRHSSSKETNTNKNASEQATDSKAENEGAPGSEQKDCTLVSEEGSGEKSKTPSSRKRKQMSKPQTSEACKDVDSAATTIPPACSPTTNEIQTGHKMKTRRRK* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2492 847 MobiDBLite consensus disorder prediction 785 809 - -
Aev09g2492 847 SUPERFAMILY Homeodomain-like 692 754 IPR009057 -
Aev09g2492 847 Pfam Homeodomain 701 745 IPR001356 GO:0003677
Aev09g2492 847 MobiDBLite consensus disorder prediction 747 772 - -
Aev09g2492 847 SMART PHD_3 355 408 IPR001965 -
Aev09g2492 847 Pfam PHD-finger 355 410 IPR019787 -
Aev09g2492 847 MobiDBLite consensus disorder prediction 154 194 - -
Aev09g2492 847 SUPERFAMILY FYVE/PHD zinc finger 345 413 IPR011011 -
Aev09g2492 847 ProSitePatterns Zinc finger PHD-type signature. 356 407 IPR019786 -
Aev09g2492 847 Gene3D - 691 763 - -
Aev09g2492 847 MobiDBLite consensus disorder prediction 482 502 - -
Aev09g2492 847 CDD homeodomain 697 750 IPR001356 GO:0003677
Aev09g2492 847 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 152 804 - -
Aev09g2492 847 CDD PHD_PRHA_like 355 407 IPR045876 -
Aev09g2492 847 MobiDBLite consensus disorder prediction 549 569 - -
Aev09g2492 847 MobiDBLite consensus disorder prediction 440 701 - -
Aev09g2492 847 MobiDBLite consensus disorder prediction 452 479 - -
Aev09g2492 847 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 339 417 IPR013083 -
Aev09g2492 847 SMART HOX_1 687 753 IPR001356 GO:0003677
Aev09g2492 847 ProSiteProfiles Zinc finger PHD-type profile. 353 410 IPR019787 -
Aev09g2492 847 MobiDBLite consensus disorder prediction 60 79 - -
Aev09g2492 847 ProSiteProfiles 'Homeobox' domain profile. 689 749 IPR001356 GO:0003677
Aev09g2492 847 MobiDBLite consensus disorder prediction 637 680 - -
Aev09g2492 847 MobiDBLite consensus disorder prediction 747 847 - -
Aev09g2492 847 MobiDBLite consensus disorder prediction 607 636 - -
Aev09g2492 847 MobiDBLite consensus disorder prediction 154 259 - -
Aev09g2492 847 MobiDBLite consensus disorder prediction 1 54 - -
Aev09g2492 847 PANTHER HOMEOBOX PROTEIN HAT3.1 152 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2492 Aev-Chr9 26657151 26662783 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2492 211 804 Homeobox Transcription Factor Family AT3G19510 44.745 2.12e-134 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Aev09g2492 PHD 2.8e-10 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2492 - - gmx:100306715 1003.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2492 09 26657151 26662783 Aev09g2492 09 26657151 26662783 ECH