Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2480 ATGTTGCGACTCTGCTACAGCCCCTTCGATTGTTGCTTCCGGCGCCTCGGCGGCGGCGGCGACGGTCTTCTCTGGCACACGGACTTGAAGCCTCATGCCTCCGGCGACTTCTCTATTGCGGTGGCTCAGGCCAATTTCAGCCTTGAAGATCAGAGCCAAGTCTTCACCTCTCCCTCTGCCACCTATATCGGCGTCTACGACGGCCATGGCGGCCCAGAAGCTTCTAGATTCGTCAACAAGCGTCTCTTACCCTATTTGCACAAGTTTGCATCTGAACAAGGGGGATTATCTGTGGATGTCATAAAGAAGGCGTTTAGTGCAACTGAGGAGGAGTTCTTGCATTTGGTGAAGGTGTCACTGCCCATTAGTCCCCAGATTGCATCAGTAGGATCGTGCTGCCTTATTGGTGCAATTTCTGATAATGTTTTGTATGTTGCCAACCTTGGAGACTCCAGAGTTGTCCTTGGAAGGAGGGATACAGAGAACAAGAATTGTCCGGTGGTGGCGGAGCGGTTGTCCACAGATCATAATGTAGCTGATGAGGAGGTGAGAAGAGAAGTTGAGGCCCTCCACCCTGATGATTCACACGTTGTGGTTTATACCCGTGGAGTTTGGAGGATTAAGGGCATTATACAGGTGTCGAGATCTATTGGTGATGTGTACTTGAAGAAACCTGATTTTTACAGAGACCCCATTTTCCAGCAATTTGGAAATCCTATTCCCTTGAAACGTGCTGTAATCACAGCTGAACCATCAATCATTATTAGGGAGCTTGAATCAGAAGATTTATTTTTGATATTTGCATCAGATGGTCTATGGGAACAATTAAGTGATGATGCAGCAGTTGAGATTGTTTTCAAATATCCAAGAGCTGGAATTGCCAAGAGACTAGTGAGAGCTGCTCTTCAGGAAGCTGCAAAGAAGAGGGAGATGAGATATGACGACATAAAGAAAATTGACAAAGGAATAAGACGACACTTTCATGATGATATCACAGTTGTTGTAATCTATCTTGATCACCATGGAGGTTCCTCTAGTGGCAGGTTTAAGCAAACTGCTGTGGGCTGTACAACTGCCCCAGTTGATATTTTCTCTCTAAATACAGATGAAGCAGAAAAGAGTATGCTTGGTGCACTTGCCTAA 1143 0.4619 MLRLCYSPFDCCFRRLGGGGDGLLWHTDLKPHASGDFSIAVAQANFSLEDQSQVFTSPSATYIGVYDGHGGPEASRFVNKRLLPYLHKFASEQGGLSVDVIKKAFSATEEEFLHLVKVSLPISPQIASVGSCCLIGAISDNVLYVANLGDSRVVLGRRDTENKNCPVVAERLSTDHNVADEEVRREVEALHPDDSHVVVYTRGVWRIKGIIQVSRSIGDVYLKKPDFYRDPIFQQFGNPIPLKRAVITAEPSIIIRELESEDLFLIFASDGLWEQLSDDAAVEIVFKYPRAGIAKRLVRAALQEAAKKREMRYDDIKKIDKGIRRHFHDDITVVVIYLDHHGGSSSGRFKQTAVGCTTAPVDIFSLNTDEAEKSMLGALA* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2480 380 ProSitePatterns PPM-type phosphatase domain signature. 62 70 IPR000222 GO:0043169
Aev09g2480 380 PANTHER PROTEIN PHOSPHATASE 2C 63-RELATED 4 375 - -
Aev09g2480 380 PANTHER ALPHABET, ISOFORM E-RELATED 4 375 - -
Aev09g2480 380 SMART PP2C_4 30 336 IPR001932 -
Aev09g2480 380 CDD PP2Cc 49 338 IPR001932 -
Aev09g2480 380 Gene3D - 28 344 IPR036457 -
Aev09g2480 380 Pfam Protein phosphatase 2C 49 307 IPR001932 -
Aev09g2480 380 ProSiteProfiles PPM-type phosphatase domain profile. 36 338 IPR001932 -
Aev09g2480 380 SUPERFAMILY PP2C-like 45 340 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2480 Aev-Chr9 26601109 26603056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2480 18 345 PP2C-type Phosphatase Gene Family AT3G51370 57.143 1.29e-138 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2480 - K01102 gmx:100812137 658.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2480 09 26601109 26603056 Aev09g2480 09 26601109 26603056 ECH
Aev09g2480 09 26601109 26603056 Aev05g0698 05 4858969 4862082 ECH
Aev05g0698 05 4858969 4862082 Aev09g2480 09 26601109 26603056 PCT