Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2475 ATGTTTATTGCAGGAGGTATTCAGAACAGTGTGCATGACAGTTCAGTGAGTGGAAATATGGTTGATACTTTGAATGAGGTGCAGCGCAGCAATGGTGCACTTGCTGTTTCTGCCAAGAGGGACGTTGGTTTGTTTGAAGGGGACAGAGATTTTGAGCCACACACTGGGATTGAATTTGAATCACATGAAGCAGCATACTCATTTTATCAGGAATATGCCAAATCTATGGGATTCACCACTTCGATCAAAAACAGCAGACGCTCAAAGAAAACAAAAGAATTTATTGATGCCAAATTTGCATGCTCTCGGTATGGAGTTACACCTGAGTCCGATAGTGGAAGCAGTCGAAGACCAAGTGTAAAGAAGACAGATTGCAAAGCCTGCATGCATGTGAAGAGAAGGCCGGATGGAAAGTGGATCATTCATGAATTTATAAAGGAACACAATCATGAACTTTTACCGGCACTGGCATATCATTTTCGTATACATAGAAATGTCAAGTTAGCTGAAAAGAATAATATTGATATCTTGCATGCTAATAGATATGAAGAGGAGGCCATTGCAGATTTTGATACATTGCACAAGCAACCAGCACTTAAATCTCCTTCACCTTGGGAAAAACAAATGTCAACAGTTTACACACATGCTATATTTAAGAAATTCCAAGTTGAAGTTTTGGGTGTAGCTGGCTGTCAATCTAAGATAGAGGATGGAGATGGAACTATTGCAAAATTTATAGTTCGGGATTATGAGAAGGATGAAGAGGAGTTTTTGGTAACGTGGAATGAGTTGAGCTCAGAGGTCTCTTGTTTCTGTCGATTGTTTGAATATAAAGGTTTCCTCTGTAGGCATGCATTGAGTGTTCTCCAACATTGTGGTTGTTCAAGTGTTCCATCTCATTATATTTTGAAAAGGTGGACCAAAGATGCCAAAAATAGGGAACCCATGGGAGATAGCACTCAAAGGGTACAAACTAGGGTGCAACGATATAATGACCTGTGCAAACGAGCTATTGATTTGAGTGAAGAAGGATCACAATCTCAAGAGAATTACAATGTTGTTTTTCGTGCACTTGTTGATGCCCTGAAAAACTGTGTACATGTGAACAATTCAAACAACAATGGTGCAGAAGCAAGCAACAATGCTTTTGGATTTCGTGAAGCAGAAGAAAATCAGGTTACTCTTGCTTTGAAACCAAATAAGAAGAGGAGCACTGCTAGGAAAAGAAAGGTGCAATCAGAGCAGGATGTTATACTTGTTGATGCGCAAGATAGCCTGCAGCATATGGATAATCTTAGCTCAGACGCAATAACCCTTAATGGATACTACGGCACCCAGCAGAATGTGCAAGGACTGCAGGTACAGTTGAATTTAATGGAGCCACCTCATGATGGATACTATGTTAATCAACAAAACATGCAAGGCCTGGGTCCCTTGAATTCTATGGGTCCAAGCCATGATGGGTTTTTTGGAACACAGCAAAGCATTCATGGGCTGGGAGGGCAACTGGAATTTCGCCCTGCAACTTCCTTTGGCTATAGCCTTCAGGAGGTTACTTTTAATGTCAGGTTTTCCTTCTCATCTCACAACCAAAAGCAGTGCTCATTGCTTGCTGAAGAAAAAATCAAGATAGGAGGTGGCAATGGACAGAAGTCCAAGATGGCTCGTGAGAGGAACATGGAGAAAAACAAACCTTCAAAGGGAAGCCAGCTTGAGTCTAACAAGAAGGCTATGTCCATCCAGAAGGAAGAAAAAATGGCACCTCTCTTTTCCCTCTCTCTGTTGTTTCTCCTTCTCCAATACCCTCTTCCATCCCTCTCAACTAATTCTGAAGGGAATGCTCTGCATGCTCTGAGAAGCAGGCTTTCTGACCCCAACAATGTTCTGCAGAGCTGGGACCCAACTCTTGTTAATCCTTGTACTTGGTTCCACGTTACTTGTGATTCCAGCAATCATGTGATCCGCTTAGACTTGGGAAACTGTAACATTTCTGGAACTCTGGGCCCAGAACTTGGCCAGTTACATCATCTGCAATACCTGGAGCTCTATAGGAATGACTTGAGAGGAAAGATTCCTGAGGAACTTGGCAACTTGGAATCACTTATTAGCATGGATTTGTATGGTAACAAATTCGAGGGAAAAATCCCAAAGTCATTTGGCAAGTTGAAGTCACTTAAATTCCTGAGGCTAAATGACAACAAGTTGACAGGATCAATACCAAGAGAACTCACTCATCTCACTAATCTCAAAATGTTTGATGTTTCTAACAATGACATCTGTGGAACAATACCAGTAGATGGCAACTTCGGATCATTCCCTGTGGAAAGTTTCGAAAACAACAGACTTAATGGTCCAGAGCTGAAAGGACTAGTTCCATATGATTTTGGATGCTGA 2394 0.4152 MFIAGGIQNSVHDSSVSGNMVDTLNEVQRSNGALAVSAKRDVGLFEGDRDFEPHTGIEFESHEAAYSFYQEYAKSMGFTTSIKNSRRSKKTKEFIDAKFACSRYGVTPESDSGSSRRPSVKKTDCKACMHVKRRPDGKWIIHEFIKEHNHELLPALAYHFRIHRNVKLAEKNNIDILHANRYEEEAIADFDTLHKQPALKSPSPWEKQMSTVYTHAIFKKFQVEVLGVAGCQSKIEDGDGTIAKFIVRDYEKDEEEFLVTWNELSSEVSCFCRLFEYKGFLCRHALSVLQHCGCSSVPSHYILKRWTKDAKNREPMGDSTQRVQTRVQRYNDLCKRAIDLSEEGSQSQENYNVVFRALVDALKNCVHVNNSNNNGAEASNNAFGFREAEENQVTLALKPNKKRSTARKRKVQSEQDVILVDAQDSLQHMDNLSSDAITLNGYYGTQQNVQGLQVQLNLMEPPHDGYYVNQQNMQGLGPLNSMGPSHDGFFGTQQSIHGLGGQLEFRPATSFGYSLQEVTFNVRFSFSSHNQKQCSLLAEEKIKIGGGNGQKSKMARERNMEKNKPSKGSQLESNKKAMSIQKEEKMAPLFSLSLLFLLLQYPLPSLSTNSEGNALHALRSRLSDPNNVLQSWDPTLVNPCTWFHVTCDSSNHVIRLDLGNCNISGTLGPELGQLHHLQYLELYRNDLRGKIPEELGNLESLISMDLYGNKFEGKIPKSFGKLKSLKFLRLNDNKLTGSIPRELTHLTNLKMFDVSNNDICGTIPVDGNFGSFPVESFENNRLNGPELKGLVPYDFGC* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2475 797 Pfam 4F5 protein related disordered region 546 578 IPR007513 -
Aev09g2475 797 Pfam SWIM zinc finger 259 293 IPR007527 GO:0008270
Aev09g2475 797 Pfam Leucine rich repeat 704 759 IPR001611 GO:0005515
Aev09g2475 797 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 177 468 IPR031052 GO:0006355
Aev09g2475 797 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 31 158 IPR031052 GO:0006355
Aev09g2475 797 PANTHER FAR-RED ELONGATED HYPOCOTYLS 3-RELATED 177 468 - -
Aev09g2475 797 PANTHER FAR-RED ELONGATED HYPOCOTYLS 3-RELATED 31 158 - -
Aev09g2475 797 Pfam Leucine rich repeat N-terminal domain 609 648 IPR013210 -
Aev09g2475 797 Gene3D - 538 586 IPR026939 -
Aev09g2475 797 SUPERFAMILY L domain-like 608 785 - -
Aev09g2475 797 SUPERFAMILY Expressed protein At2g23090/F21P24.15 543 581 - -
Aev09g2475 797 MobiDBLite consensus disorder prediction 554 569 - -
Aev09g2475 797 Pfam FAR1 DNA-binding domain 67 154 IPR004330 -
Aev09g2475 797 MobiDBLite consensus disorder prediction 546 578 - -
Aev09g2475 797 ProSiteProfiles Zinc finger SWIM-type profile. 257 293 IPR007527 GO:0008270
Aev09g2475 797 Gene3D Ribonuclease Inhibitor 607 788 IPR032675 -
Aev09g2475 797 SMART 26again6 268 295 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2475 Aev-Chr9 26580088 26588643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2475 589 785 Receptor kinase-like Gene Family AT1G71830 59.596 8.41e-68 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aev09g2475 FAR1 2.6e-29 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2475 - - gmx:100805377 598.586