Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2468 ATGGCTTTGGAGGCTCTGAATTCTCCAACAGCTGCAGGCACAACGCCTCCTTTCATTCCTCGTTTCGGAGAAGAGGAGGAGGAGGAAGAGGCTGAGCTTCACCTGAGTCGTCATCATGGTGAGCCATGGGCTAAGAGGAAGCGCTCAAAACGACCCCGTATGGAGAACCCTCCTACAGAGGAAGAGTACCTGGCACTCTGCCTCATCATGTTAGCTCACAGCGGCAACAACAACAACAAGAACAGGAAGAACACCTCTCTGTCTCTGCAGAACGAAACAGAGTCATCAACATCTTCGCGGCAAGAAGGGCCGATGATGAATAATTCGCCGCCTATGAAGCTGACTCATAGGTGCACAGTCTGCAACAAGGCCTTCCCTTCTTACCAAGCACTCGGTGGCCATAAAGCCAGCCACCGCAAATCCTCTTCTGAAAACAACAACAACGCCGCCACCGTATCAACCGCCGCAAACAACGACAACGTCTCAACCACCACCACCGCTGCTGCTGCCGGCGGCGGAAGGATGCATGAGTGCTCCATCTGTCACAAGAGCTTCCCTACTGGTCAGGCCCTGGGTGGTCACAAGCGATGCCACTACGACGGAGGCAATACCACCACCACCAGCAACAACAACGTTCACGCCAACAACGGCAGTGTGGCGATGTCCTCCGAGGGTGGCGCCTCCTCCTCCCACAGCCACCGTGGCTTTGACCTCAACCTCCCAGCGCCGTTGGCGGAGTCATGGCCGCCGGCGGGGCTTGACGGCGGCGAGGTCAAGAAGAAGATGATGATGATGAACAGGGGCTGCGAACAAGAGGTGGAAAGCCCCTTGCCAGTAAACGCTAAGAGGCCGCGTCTATTCTCCGGCGAAGAAGATACAACTTTGCTGTGA 891 0.56 MALEALNSPTAAGTTPPFIPRFGEEEEEEEAELHLSRHHGEPWAKRKRSKRPRMENPPTEEEYLALCLIMLAHSGNNNNKNRKNTSLSLQNETESSTSSRQEGPMMNNSPPMKLTHRCTVCNKAFPSYQALGGHKASHRKSSSENNNNAATVSTAANNDNVSTTTTAAAAGGGRMHECSICHKSFPTGQALGGHKRCHYDGGNTTTTSNNNVHANNGSVAMSSEGGASSSHSHRGFDLNLPAPLAESWPPAGLDGGEVKKKMMMMNRGCEQEVESPLPVNAKRPRLFSGEEDTTLL* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2468 296 SUPERFAMILY beta-beta-alpha zinc fingers 116 198 IPR036236 -
Aev09g2468 296 MobiDBLite consensus disorder prediction 132 158 - -
Aev09g2468 296 PANTHER ZINC FINGER PROTEIN ZAT10 1 278 - -
Aev09g2468 296 Pfam C2H2-type zinc finger 176 200 - -
Aev09g2468 296 Pfam C2H2-type zinc finger 116 140 - -
Aev09g2468 296 Gene3D Classic Zinc Finger 114 198 - -
Aev09g2468 296 ProSiteProfiles Zinc finger C2H2 type domain profile. 176 198 IPR013087 -
Aev09g2468 296 MobiDBLite consensus disorder prediction 75 114 - -
Aev09g2468 296 MobiDBLite consensus disorder prediction 142 158 - -
Aev09g2468 296 ProSitePatterns Zinc finger C2H2 type domain signature. 118 138 IPR013087 -
Aev09g2468 296 MobiDBLite consensus disorder prediction 1 58 - -
Aev09g2468 296 ProSiteProfiles Zinc finger C2H2 type domain profile. 116 143 IPR013087 -
Aev09g2468 296 MobiDBLite consensus disorder prediction 208 234 - -
Aev09g2468 296 ProSitePatterns Zinc finger C2H2 type domain signature. 178 198 IPR013087 -
Aev09g2468 296 MobiDBLite consensus disorder prediction 271 296 - -
Aev09g2468 296 SMART c2h2final6 176 198 IPR013087 -
Aev09g2468 296 SMART c2h2final6 116 138 IPR013087 -
Aev09g2468 296 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 1 278 IPR044653 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2468 Aev-Chr9 26532933 26533823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2468 1 286 C2H2 Transcription Factor Family AT1G27730 41.892 4.73e-47 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev09g2468 zf-C2H2_6 1.5e-12 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2468 - - adu:107467374 317.005