Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2464 ATGGAACATTCTCATCTGATATCTGAAGAGTGGGGCTCTCTTAGTGGACTGTACACAGCTGAGGAAGCTGACTTTATGACTCAGTTACTTTCTGGTAACTGTTCTGTCTCAGAGAAGCACTGTGTGAGTTCCAGTTCTGTCATGCCATATTCTGCTTTTTGGCATGGCCATGAATCCAAAAAAGTGTCCAATAGCAATTCATCTTTGTCTTCAAATGTTGCTAATACTAATTACTTGTGCTTCTCCCAAGGGAGTAGCTCCAGCACTGATAGTGGTAATGTATTTTCCACCACCACAAGTAAGGGAACCTACTCCTGTGATGCTGCTACAGAAACAAAATTGGACTCCATCTCCAATGGTTTTTGCTTTGGAGATTCCAAATTTAGTTCACATGGTTTTCAATGTAATGACAACTATGAAATCACTGATGAAGAGTCAGGAAAACCGGTTCTTGCTGACAATTTCTTGCAGGCTAAGAAAGAGTATGAAAGGATGGTTTTTGAACCTGCAGAAGAAGCTAAAAGCATAAACCTGGTGAACCCAAATAAAAGGATAAGAAACTCATTTGAGGTCTCAACAAACATGAGGAATATTAAATCAAGGAAGGAGAATCCAATAGTTGCTTCTATGAGCAACAATGAAGAGGATAGAAGTGTTTCTCTGGAGCTACACAGAGGGAATTCTCCAATTCTAAGCACAAAAGTCCCATCAGCTCCCAATTTAGATAGAAGAGCTAGCAATAGTGCTGCCCCTGATCCACAGAGCCTCTATGCAAGAAAAAGAAGAGAGAGGATAAATGAAAGGCTAAAAGTACTGCAAACACTTGTCCCCAATGGAACCAAGGTGGATATTAGCACAATGCTTGAGGAAGCTGTTCAGTATGTCAAGTTTTTACAGCTCCAAATTAAGCTTCTGAGCTCTGATGATCTATGGATGTATGCTCCAATTGCTTACAATGGAATGAACATTGGACTAGACCTAACCATTACTCCTCCAACCAAAGGAACATAA 1011 0.4036 MEHSHLISEEWGSLSGLYTAEEADFMTQLLSGNCSVSEKHCVSSSSVMPYSAFWHGHESKKVSNSNSSLSSNVANTNYLCFSQGSSSSTDSGNVFSTTTSKGTYSCDAATETKLDSISNGFCFGDSKFSSHGFQCNDNYEITDEESGKPVLADNFLQAKKEYERMVFEPAEEAKSINLVNPNKRIRNSFEVSTNMRNIKSRKENPIVASMSNNEEDRSVSLELHRGNSPILSTKVPSAPNLDRRASNSAAPDPQSLYARKRRERINERLKVLQTLVPNGTKVDISTMLEEAVQYVKFLQLQIKLLSSDDLWMYAPIAYNGMNIGLDLTITPPTKGT* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2464 336 MobiDBLite consensus disorder prediction 229 255 - -
Aev09g2464 336 Pfam Helix-loop-helix DNA-binding domain 259 299 IPR011598 GO:0046983
Aev09g2464 336 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 249 298 IPR011598 GO:0046983
Aev09g2464 336 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 252 314 IPR036638 GO:0046983
Aev09g2464 336 MobiDBLite consensus disorder prediction 229 253 - -
Aev09g2464 336 SMART finulus 255 304 IPR011598 GO:0046983
Aev09g2464 336 CDD bHLH_AtIND_like 252 312 - -
Aev09g2464 336 Gene3D - 247 306 IPR036638 GO:0046983
Aev09g2464 336 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 6 331 - -
Aev09g2464 336 PANTHER TRANSCRIPTION FACTOR BHLH54 6 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2464 Aev-Chr9 26508718 26510204 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2464 244 325 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 89.024 6.98e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev09g2464 HLH 3.2e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2464 - - gmx:100816788 352.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2464 09 26508718 26510204 Aev09g2464 09 26508718 26510204 ECH