LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev09g2428	ATGGTTTGTTCTCGTAATAGTGTGCTTTCCTTTATTGTTTGTTTACTTCTTGTCATTGTGATCATATCTGAAGCCACTGCTAAGTCAGATAACCCGTACCCGTTCTGCATGAAAAGTGCTGCAGATAGTTCCCCAAACAGCACATACCGGACCAACCTAAACACCCTTCTTTCAAGGCTCACTTCCAACACCCAAAATGACTATGGCTTCTACAACTCCTCTTATGGCCAAGGCTCTGACCAAGTCTACGCTACTGGGCTCTGCAGAGGAGATGTTGCCCCAGATACGTGCCGTACTTGCCTCAACAATTCTAGCTCCATTCTCCTCAAGAACTGTACACGTAAGGAGGCTATGGCAGTAAGTGATGAGTGCATGTTACACTATGCAGATCGCTCAATATTTGGTTATGATGAAACTCAATACTTGGTCTATGAGTGGAGTTTAACTAATGTAACAGATTGGGATCAGTACAGTTCTGTGCTTCAGAAGTTGCTGTCAAGACTGAGAGAGAAAGCTGCAACAAGTGAATCCCATGATCCTAATCGCAAGTTTGCTGCAGGAAATACAACAACTCCGAGTTCTGAAACCATATATGCTGTTGTTCAGTGCAACCCTGATTTGACAGAGGCACAATGCAGTGACTGCTTGGTTGGGGCTTTCTCGGAGATATCCACATATTGTAGTAACAGGTCAGATGGTGGGATTATTAAATTCAGTTGCAATTTCAGATATAAGAAGGTCAGGTTCTATACAGCAACTGTTGATGACGCAATAACAATATCATTGACTCCTCAAGGATCTCCTGTTCCTTCACCTCTTCCTTCTCCTCTTACTCCATCCATCACTACAGAGCCATCAAAGACCACTTATCAAGGAAAGAACAACAGATCACTAGCTGTTATCGCCAAAGCTGTCCCTGCTGTTGCCTTTGTTGTATTTCTGATCTTTGTTTGCATCTATTTAAGAGTGAGAAGGTCAACAAAACATTTTGAGAGTGAAGATGTAGGTGATGATGAAGTTAATCAAGTCAAGTTATCACAATTTGACTTTGACACTATCAGAGTTGCTACAAACAACTTTTCTGATTCAAATAAGCTTGGACAAGGTGGATTTGGCCCTGTTTATAAGGGCAAACTCTCCAATGAGCAAGAAATTGCTGTCAAAAGGCTATCTAAGAATTCTTCCCAAGGAGATATTGAGTTCAAGAATGAAGTGCTATTAATGGCCAGGCTTCAACATCGAAATTTAGTTAGGCTCCTTGGTTTCTGTTTTGAAGATAAAGAACGGCTACTCGTTTATGAATTTCTTCCCCATAAAAGCCTGGACTACTACTTATTTGATCCAATTAGGCGAGCATATTTGGATTGGAAAACACGCTACCTGATAATTGAAGGAATCGCACGAGGTCTTCTATACCTTCACGAGGATTCTCAACAAAGGATTATTCATCGTGATTTAAAACCTAGTAATATTCTTCTAGATGCAGATATGAATCCTAAGATTTCAGATTTTGGATTAGCAAGGTTGTTTGATATGGATCAAACCCAGGCCATTGCAAGTAAAATAGCAGGAACACTGGGATATATGGCACCGGAGTATGCACGCCGGGGAAAATTCTCGGTGAAGTCAGATGTCTTTAGCTTTGGTGTGATAATTTTAGAGATTGTAAGCGGCCAAAGAAACAGTGCATTTCATGATGGAGAGAACGTGGAGCATCTGTTAAGCTTTGCTTGGAAAAACTGGAGAAAAGGGACAGCTTCTAATATCATAGATCCTATCTTAGACAGTGATTCTAGAAGTGAGATAGAAAGATGCATTCATATTGGGTTACTTTGTGTTCAAGAAAAGGTTGCTGATAGACCAACATTGGCTTCAGTTCTGCTTATGCTTAACAGCCAATCCTTTTGTATCTCAGTTCCCATGCAACCTGCATTTTTCATCACTGATAAATGCACAACCACCATCCTATTTTCAGAGTGTGGTTCTATGGCAACAGAATCAAGAGAGCAGAAATGTAACTCTGCTGAAGCATCAACAAATGATGCCTCAATCAGTAGTCTATATCCTCGTTAG	2073	0.4076	MVCSRNSVLSFIVCLLLVIVIISEATAKSDNPYPFCMKSAADSSPNSTYRTNLNTLLSRLTSNTQNDYGFYNSSYGQGSDQVYATGLCRGDVAPDTCRTCLNNSSSILLKNCTRKEAMAVSDECMLHYADRSIFGYDETQYLVYEWSLTNVTDWDQYSSVLQKLLSRLREKAATSESHDPNRKFAAGNTTTPSSETIYAVVQCNPDLTEAQCSDCLVGAFSEISTYCSNRSDGGIIKFSCNFRYKKVRFYTATVDDAITISLTPQGSPVPSPLPSPLTPSITTEPSKTTYQGKNNRSLAVIAKAVPAVAFVVFLIFVCIYLRVRRSTKHFESEDVGDDEVNQVKLSQFDFDTIRVATNNFSDSNKLGQGGFGPVYKGKLSNEQEIAVKRLSKNSSQGDIEFKNEVLLMARLQHRNLVRLLGFCFEDKERLLVYEFLPHKSLDYYLFDPIRRAYLDWKTRYLIIEGIARGLLYLHEDSQQRIIHRDLKPSNILLDADMNPKISDFGLARLFDMDQTQAIASKIAGTLGYMAPEYARRGKFSVKSDVFSFGVIILEIVSGQRNSAFHDGENVEHLLSFAWKNWRKGTASNIIDPILDSDSRSEIERCIHIGLLCVQEKVADRPTLASVLLMLNSQSFCISVPMQPAFFITDKCTTTILFSECGSMATESREQKCNSAEASTNDASISSLYPR*	691

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev09g2428	690	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	481	493	IPR008271	GO:0004672\|GO:0006468
	Aev09g2428	690	Gene3D	Transferase(Phosphotransferase) domain 1	436	637	-	-
	Aev09g2428	690	CDD	STKc_IRAK	366	631	-	-
	Aev09g2428	690	SMART	serkin_6	360	635	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev09g2428	690	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	9	674	-	-
	Aev09g2428	690	Gene3D	Phosphorylase Kinase; domain 1	334	435	-	-
	Aev09g2428	690	ProSiteProfiles	Protein kinase domain profile.	360	636	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev09g2428	690	ProSiteProfiles	Gnk2-homologous domain profile.	139	249	IPR002902	-
	Aev09g2428	690	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	9	674	-	-
	Aev09g2428	690	SUPERFAMILY	Protein kinase-like (PK-like)	346	655	IPR011009	-
	Aev09g2428	690	Gene3D	-	138	249	IPR038408	-
	Aev09g2428	690	Gene3D	-	33	132	IPR038408	-
	Aev09g2428	690	ProSiteProfiles	Gnk2-homologous domain profile.	31	133	IPR002902	-
	Aev09g2428	690	Pfam	Salt stress response/antifungal	150	245	IPR002902	-
	Aev09g2428	690	Pfam	Salt stress response/antifungal	36	130	IPR002902	-
	Aev09g2428	690	MobiDBLite	consensus disorder prediction	265	289	-	-
	Aev09g2428	690	MobiDBLite	consensus disorder prediction	671	690	-	-
	Aev09g2428	690	Pfam	Protein kinase domain	361	570	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev09g2428	Aev-Chr9	26322471	26325701	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev09g2428	8	690	Receptor kinase-like Gene Family	AT4G21410	44.413	0.0	535

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Aev09g2428		Pkinase	7.8e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev09g2428	-		-	gmx:100790532	865.144