LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev09g2426	ATGGCTATGACACCTTCAAGAAGAGTGATTCTGATTTCTGTTTTTCTTAATCTGCTTCTTATACTCATTATTTCTCATCACACCACGGCCCAGCCAAGCTTCTTGTACCATTTTTGCATCGATAATAATGGAAACTACACAGAAAACAGTGCCTACAAGACCAACCTCAACACCCTCTTGTCCAATTTGTCATCCAGCACACAGATTGATGACCATGGCTTCTACAATTTCTCTCAGGGCCAAGGCTCTGACAGAGTCAACGCAATCGCCATGTGCAGAGGAGATGTTAAGCCAGACGCTTGCCGTAGCTGCCTCAATGATTCCAGAGTCCTCCTCACACAGCGCTGTCCAAACCAGAAGGAGGCAATTGGATGGTATGACAATTGCATGCTCCGGTACTCGAACCGGTCCATATTTGACACAATGGAGCCTAATCCTACCTACTATCTTTGGGTCCAAAACAATGCAACTGATATGGACAAGTTCAATGAAGCGCTTAGGGACTTGGTGGATGGCCTTGCAACAAAAGCAGCATCAGGTGATTCCCTTAAGAAGTATGCTGCAGGAAGCGCGGCGGGTCCAAGCTTTCAAACTATATTTGCTCTTCTGCAGTGCACACCTGATTTATCAGAGCTGCAGTGCAATGATTGCTTGGTTAGAGCTATCTCAGATATCTCTGTTTGTTGTGCTGGCAAGACAGCTGGAAGAATTGGAAAACCGAGCTGCAATCTTAGATTCGATACATCGGCCTTCTATGCTGATGATGCCTCCTCTCCAACATCGCCATCATCACAAGTACCTCCTCCTCCGGTCACCGATACCAATACCAATAACAATACTACAACTTCTACTGGAGGAAAGAGCAACTCAACAGGAACTGTTATTGCAATAGTTGTGCCAATTGTGGCCATTGTTGTATTGATCATCTGTGTCTGTATCTTCATAAGAGCAAGGAAGCATAAGAAACAGAATCGCAATAATGTTGACAATGAAATTGAACCCACTGAGACATTGCAATTCAACTTTGACACCATCAAAAGGGCTACAAATAACTTCTCTGAGGCAAATATGCTAGGAAGAGGAGGATTTGGACCTGTTTTCAAGGGAAAGCTTTCCGATGGACAAGAAGTTGCTGTCAAAAGGTTGTCAGTGGATTCAGGACAAGGAGATAAAGAATTTAAGAATGAAGTTCTGTTAGTGGCGAAGCTTCAACACCGGAATTTGGTCAGGCTACTTGGTTTTTGCTTGGAAGGAAAAGAAAAATTACTTGTCTATGAGTTTGTTCCCAATAAAAGCCTAGACTACTTCATATTTGATCCAATTAAGCGTGCTCAATTGTCTTGGGAAAGGCGTTACAAAATCATAGGAGGCATTGCGAGAGGCCTTCTTTACCTTCATGAGGATTCGCGTCTGCGTATCATTCATCGCGATCTGAAAGCTAGCAATATTCTCTTGGATGAAAAAATGGATCCTAAAATATCAGATTTTGGCATGGCAAGGTTGTTTGTTGTGGATCAAACTCAAGCTAACACAAATAGAATTGTCGGAACTTATGGTTACATGGCCCCTGAGTATATAATGCAAGGACAATTCTCAGTGAAGTCAGATGTCTATAGTTTTGGCGTACTGCTTCTGGAGATAGTAACCGGGCAAAAAAATAGCGGCTTTCGCAGTGGAGAAGATGTAGAGGACCTAACAAGCTTTGCTTGGAAGAATTGGAAACAGGGAACAGCATCAAACCTCGTAGATCCCACAATAAGTAATGGTCCAACAAATGAGATAATGAGATGCATCCACATTGGTTTACTGTGTGTTCAGGAAAATTTAGCTGATAGACCAACCATGGCTTCAATAGTACTAATGCTTAATAGCTTCTCTCTCAGTCTCCCAGTGCCATCAGAGCCTGCATTTTTTATGCGTAGTAGAGGTTTAACAGAGATTCCCTCATGGGAGTATAATTCAGGGGCAACAGAACCAAGCAACCGTAGATCCTCCATTTTGTGA	2004	0.4286	MAMTPSRRVILISVFLNLLLILIISHHTTAQPSFLYHFCIDNNGNYTENSAYKTNLNTLLSNLSSSTQIDDHGFYNFSQGQGSDRVNAIAMCRGDVKPDACRSCLNDSRVLLTQRCPNQKEAIGWYDNCMLRYSNRSIFDTMEPNPTYYLWVQNNATDMDKFNEALRDLVDGLATKAASGDSLKKYAAGSAAGPSFQTIFALLQCTPDLSELQCNDCLVRAISDISVCCAGKTAGRIGKPSCNLRFDTSAFYADDASSPTSPSSQVPPPPVTDTNTNNNTTTSTGGKSNSTGTVIAIVVPIVAIVVLIICVCIFIRARKHKKQNRNNVDNEIEPTETLQFNFDTIKRATNNFSEANMLGRGGFGPVFKGKLSDGQEVAVKRLSVDSGQGDKEFKNEVLLVAKLQHRNLVRLLGFCLEGKEKLLVYEFVPNKSLDYFIFDPIKRAQLSWERRYKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDEKMDPKISDFGMARLFVVDQTQANTNRIVGTYGYMAPEYIMQGQFSVKSDVYSFGVLLLEIVTGQKNSGFRSGEDVEDLTSFAWKNWKQGTASNLVDPTISNGPTNEIMRCIHIGLLCVQENLADRPTMASIVLMLNSFSLSLPVPSEPAFFMRSRGLTEIPSWEYNSGATEPSNRRSSIL*	668

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev09g2426	667	Pfam	Salt stress response/antifungal	39	135	IPR002902	-
	Aev09g2426	667	Pfam	Salt stress response/antifungal	155	248	IPR002902	-
	Aev09g2426	667	SMART	serkin_6	352	626	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev09g2426	667	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	10	643	-	-
	Aev09g2426	667	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	473	485	IPR008271	GO:0004672\|GO:0006468
	Aev09g2426	667	Pfam	Protein tyrosine and serine/threonine kinase	356	620	IPR001245	GO:0004672\|GO:0006468
	Aev09g2426	667	ProSiteProfiles	Gnk2-homologous domain profile.	34	138	IPR002902	-
	Aev09g2426	667	Gene3D	Phosphorylase Kinase; domain 1	313	427	-	-
	Aev09g2426	667	Gene3D	-	31	137	IPR038408	-
	Aev09g2426	667	Gene3D	-	145	251	IPR038408	-
	Aev09g2426	667	ProSiteProfiles	Gnk2-homologous domain profile.	144	251	IPR002902	-
	Aev09g2426	667	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	10	643	-	-
	Aev09g2426	667	ProSiteProfiles	Protein kinase domain profile.	352	626	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev09g2426	667	CDD	STKc_IRAK	358	623	-	-
	Aev09g2426	667	MobiDBLite	consensus disorder prediction	270	287	-	-
	Aev09g2426	667	MobiDBLite	consensus disorder prediction	255	287	-	-
	Aev09g2426	667	Pfam	TMEM154 protein family	271	337	IPR028064	-
	Aev09g2426	667	SUPERFAMILY	Protein kinase-like (PK-like)	337	652	IPR011009	-
	Aev09g2426	667	Gene3D	Transferase(Phosphotransferase) domain 1	428	629	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev09g2426	Aev-Chr9	26310336	26313150	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev09g2426	3	641	Receptor kinase-like Gene Family	AT4G21410	49.849	0.0	625

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Aev09g2426		PK_Tyr_Ser-Thr	4.1e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev09g2426	-		-	gmx:102662291	975.696