LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev09g2424	ATGGCTTCAAGCACCTTCAAGCTTGTCTCCCTGGTGGTCCTTCTGAATTTCCTCAATTTTGCAGTTACTGAAGCACAAGGTCCTACTTTTAATTACGAGGTTTGCTCACAAAACAAAACGACTGCCAACAGTGCCTTCCAAACGGACCTCAACACCCTATTCTCTTCACTCACTTCCAACGCCACCGCCAACTCTGAATTCTACAACACCACAGTGACCGGCAGAAACTCCTCAGACTCCGTCTATGGACTCTTCATGTGCAGGGGTGACTCCCCTTCTTGTGGCCAGTGCGTGGTCAACGCAACACAGAGACTTTCCTCAGACCCAGATTGTGTCTTGTCCAAACGAGCTGTGATATGGTATGACGAGTGCATGGTTCGGTATTCCGATAACCGCTCTATGTTCTCCACAGTGGCCACTAGGCCCGGAGTTTACCTCATGAACACCGCCAACATCACGAATCAGGCAAGCTTCATGCAGTTGTTGTTCAAAACTATGAACGAAACTGCGGATGAAGCTGCCAGGTTTCCCGTTCTTGCAAAGAAGTACGCAACAAAACAAGCAAACATATCAGGATTTCAGACCCTTTATTGTTTGGCTCAGTGTACGGAGGACTTGTCACCTCAAAATTGCAGAAGCTGTCTCACTGAGGCCATAAGTGAGTTACCGGCTTGCTGTGAAGGAAAACAGGGAGGGAGAGTTCTGTTTCCAAGCTGTAATGTCAGGTATGAGTTGTACCCTTTTTATCGCTCCACTGCTTCTGCGCCTGCGCCTTCACCAGCAGGGCTCGTTCCTCCTCCACCTGGCCTTGTTCCTGCCACAAATTCATCTGATTCCGGAGGAAGTAGTGGGATCTCGTCGGGGACAATTGTTGCAATCGTGGTCCCAATCGCAGTGGCGGCTTTGCTGCTATTAGTCGCGGCCATTTGTTTCTTAAGTAGAAGAAGAGCAGGGAAGAGGCATGATTCTGCACAATACCAACAAACTGCGACTGACATCACAACTGCGGAATCCTTGAGATATGATTTCAGTACAATCGAAGCAGCCACAAATAAATTTTCTGAAGCTAACAAGCTAGGTGAAGGTGGATTTGGTGAGGTTTACAAGGGCTTGCTTCCAAGCGGACAAGAAATAGCTGTCAAGAGACTCTCAAAAGATTCCGGACAAGGTGGAGAACAATTTAAGAATGAAGTTGAGGTGGTTGCCAAGCTTCAACATAGAAATTTGGTACAGCTGCTGGGATTTTGCTTGCAAGGAGAAGAGAAGATACTTGTTTATGAATTTGTACCCAACAAAAGCCTGGACTACATTCTTTTTGATCCTGAAAAGGAAAGGTTGTTGGATTGGCAAAGGCGATACAAGATTATAGGAGGCATTGCTCGAGGAATCCAATACCTCCATGAAGATTCTAGGCTTAAAATTATACATCGTGATCTTAAACCTAGCAACATATTGTTGGATAAAGATATGAATCCAAAAATATCAGATTTTGGCATGGCAAAAATATTTGGAGTTGATCAAACTCAAGGAAATACTAGTAGGATTGTAGGGACATATGGTTACATGTCTCCGGAGTATGCAATGCAAGGAGAATTCTCAGTTAAATCTGATGTATACAGTTTTGGAGTCCTAGTTTTGGAGATTATAAGTGGCAAGAAGATCAGCTCTTTCTATCAAACAGACGTTGCTGAGGATCTAGTGAGCTATGCCTGGAAACTTTGGAATGATGGAGCTCCCCTAGAGTTGATGGCTCCTACATTAAGAGATTCGTATTCTCAAAATGAAGTTATCAGATGCATCCATATTGGTTTACTCTGTGTCCAAGAAGATCCAGCAGATAGGCCAACAATGGCAGCAATAGTCCTTATGCTGGACAGTAATACTGTCACTCTACCAGTTCCTAATCAGCCTGCATTTTTTGTTCACAGTGGAACTGATTCATTCATGCCGAAGGAGCTGCAATTTGGTCAATCTACAACCAATTCAGTACAAAAGTCTATCAATGAGATGTCAGTTACTGATGTAGAACCTAGATAA	2037	0.4423	MASSTFKLVSLVVLLNFLNFAVTEAQGPTFNYEVCSQNKTTANSAFQTDLNTLFSSLTSNATANSEFYNTTVTGRNSSDSVYGLFMCRGDSPSCGQCVVNATQRLSSDPDCVLSKRAVIWYDECMVRYSDNRSMFSTVATRPGVYLMNTANITNQASFMQLLFKTMNETADEAARFPVLAKKYATKQANISGFQTLYCLAQCTEDLSPQNCRSCLTEAISELPACCEGKQGGRVLFPSCNVRYELYPFYRSTASAPAPSPAGLVPPPPGLVPATNSSDSGGSSGISSGTIVAIVVPIAVAALLLLVAAICFLSRRRAGKRHDSAQYQQTATDITTAESLRYDFSTIEAATNKFSEANKLGEGGFGEVYKGLLPSGQEIAVKRLSKDSGQGGEQFKNEVEVVAKLQHRNLVQLLGFCLQGEEKILVYEFVPNKSLDYILFDPEKERLLDWQRRYKIIGGIARGIQYLHEDSRLKIIHRDLKPSNILLDKDMNPKISDFGMAKIFGVDQTQGNTSRIVGTYGYMSPEYAMQGEFSVKSDVYSFGVLVLEIISGKKISSFYQTDVAEDLVSYAWKLWNDGAPLELMAPTLRDSYSQNEVIRCIHIGLLCVQEDPADRPTMAAIVLMLDSNTVTLPVPNQPAFFVHSGTDSFMPKELQFGQSTTNSVQKSINEMSVTDVEPR*	679

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev09g2424	678	MobiDBLite	consensus disorder prediction	257	278	-	-
	Aev09g2424	678	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	3	676	-	-
	Aev09g2424	678	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	3	676	-	-
	Aev09g2424	678	ProSiteProfiles	Gnk2-homologous domain profile.	28	133	IPR002902	-
	Aev09g2424	678	CDD	STKc_IRAK	359	625	-	-
	Aev09g2424	678	ProSiteProfiles	Protein kinase domain profile.	353	639	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev09g2424	678	Gene3D	-	143	248	IPR038408	-
	Aev09g2424	678	Gene3D	-	27	132	IPR038408	-
	Aev09g2424	678	ProSitePatterns	Protein kinases ATP-binding region signature.	359	381	IPR017441	GO:0005524
	Aev09g2424	678	Gene3D	Phosphorylase Kinase; domain 1	314	428	-	-
	Aev09g2424	678	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	474	486	IPR008271	GO:0004672\|GO:0006468
	Aev09g2424	678	Pfam	Protein kinase domain	354	621	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev09g2424	678	Pfam	Salt stress response/antifungal	151	246	IPR002902	-
	Aev09g2424	678	Pfam	Salt stress response/antifungal	35	130	IPR002902	-
	Aev09g2424	678	Gene3D	Transferase(Phosphotransferase) domain 1	429	631	-	-
	Aev09g2424	678	SUPERFAMILY	Protein kinase-like (PK-like)	338	646	IPR011009	-
	Aev09g2424	678	SMART	serkin_6	353	624	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev09g2424	678	ProSiteProfiles	Gnk2-homologous domain profile.	140	248	IPR002902	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev09g2424	Aev-Chr9	26295758	26298815	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev09g2424	3	678	Receptor kinase-like Gene Family	AT4G05200	54.136	0.0	690

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Aev09g2424		Pkinase	1.6e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev09g2424	-		-	lang:109353867	972.23