Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2409 ATGGCTCGATCCAAGAACAACAATGCCTCATCGGCCAATGGTAACTTGTTGTTGCCCAACACTCAACATGTGAACACTCCTGTCGTCCCTGTTGCCGTTGGTGGTGGTGGTAGCAACCAAAACAACGTGGAAGTAATTGCTCCTTCTGGCTCCGTGAATCCGCAACCACCGAAAAGGAGGCGCTACAACCGCCACACTCCACAGCAGAGAAATCACATGGAAGAGTTCTTCAAAGAGTGCCCTCACCCAGACGACAAACAAAGGAAAGAGCTGAGCGCATTGCTGGGCTTGACTCCTTTGCAAATCAAGTTTTGGTTCCAGAACAAGCGAACCCAGGTCAAGAGTTCACAAGACCGGTGTGACAACGATGGTTTGAGATTAGCGAACCAAGATCTTCGTGCTGAGAATGAAAGCTACAGGAACATCCTAGATAGAACTAAATGTCTTGAATGCGGAGGGCCTTCTCCCTTTGAGGAACAAAAGTTGATAGCCGAGAATTTCGTTTTAAGACAAGAGATTGAGAGGGTGAAGAAACTGCTGACAAACTTATTTATACAAGCACCTCAGACTTCAAACCCTAAGATGATGCCAACTCATGAGCTGCACAACAACACTGACATAGCGGGGCCTTCCCTTAATAATAATGGAGCAGTTAGCGGCGTCAATAACAATGACGTCATCATGCCTTCTTTGAGTTTGTATGATCAACTTCTTGGCAATTTCAATAGTAATCTGCCATCATTCCCAGACAACAACGTTATGGCTCCAACTACTGCTGAAGGAGTTGTTGCTGGAGTGAATTTTCTGCCACCCCAAGACACCAACAACATGTCATCAATGGGTTGGGTTTATGAAGACGATGACATGGCTCCACTCAGTTCACTCTTTGATGATGGACTTGATAATAATAATTTCATGTTACCGGCGGGTTTGCAGCTCAATGAAGGAGCAGGAGTACTAATTAATGATGATAGTAATAATAATCTGCTGCCAAATTTGGTTGGCGAGTATGTTCCACCTCAATACTACAACGACAACACCAACACCAACATCAACATCAACATGATGATGCCTTCGAGTTCATCAACGGTTAATAATCAAGGAGTTGGTGTTGGCAGTAGTCTTCTTAGGAGGTTGTTACTCCCAATAGTTCTTGCCAATGGACGTGTGTCTGACACAGCCAAGGTGATAGAGCTTGCGCTTGAGTCACTAGAGGAATTCAAGATCTTGGCTCTAGCTGCTGCCAATAATAACAATAATCTGTTATGGGTGCTTGGAGACTACAATGCTGAGATCCTGAATGAGAAGGAATACTTCAGGACTTTCCCAAATGGAATGGGCCCCAAAACGGCGGGCTTCAGATCTGAATCCTCAAGAGACTCCATGGTGGTTCCCATCAATCACATCACCCTCATTGAGATCCTCATGGATGTGGGTCAATGGTCACGTGTGTTTTGCGGGATTGTTTCAAAAGCAGCGATACTTGAAGTCCTATCAAAGGGACCTGAAGGAAGCTACGATGGATGCATCCAAGTGATGTCAGCGCAGTTTCAGATAGCATCAACATATGTTCCACCTCGTGAGTACGATATGGTAAGGTACTGTAAGCAGCTGGAAGATGGGTCATGGGCGGTGGTTGATGTTTCTTTGGATTCTATGCGGCCAAGTCCAACCGCTGCTTTCTCTTGTTCCCGAAGAAGGCCCTCTGGTTGTTTGATCCAGCCTTTGCCTGATGGATTCTCATCCAAGGTTACATGGGTAGAACATGTGGAGGTGGATGACAAATTACCTGTGGCACATAGTATTTATAAATGCCTAATTGAGTCTTGCCTTGCTTTCGGAGCAAGAAGGTGGATGGCTCTCTTGAACGGACAGTGCCAGCGCATCGCTGCTACGCTCATCACTCACATACCACAAGGACAACATAGTGGCATATGTTTCACACTGACGAATCGTGAGGTTCGGAAAAGTTTGATGAAGCTATCGGAGAGGATGGTGAAGAGCTTTTACATTGGAGTAGGACATGCAACGCCGCAAGGGTGGACAACACTGACTCCGGCGGCGGCTGGAGTTCATAACATAGTGAGGATAATGACAAGAAATGTGGAGAATGACCCTGGTTCCCCTACCGGTATTGTTATTAGTGCTGCTACTTCCTTCAACCTCACTGCTACTCCTCAATCTTTTTTTGATTCCATTCGAAATGAAACCTTCAGAACTCAGTGGGATGTTCTGGTGGCTGGTGGGACAGTTCAGCAAGTTGGGCGCATAGAAAATGGTCGTGACCCTGCCAACTGTGTCTCTATGCTCCGTGTCGAGAGTTCAAATCCAATACACAGGAACCTGATCATACTTGAAGAGAGCGGGAGAGATTCGACGGGATGGGTGGTGGTGTTTTCTCCACTTGAGATTAGCTCAGTCAACGCTCTCATGGCTGGTCAACACCCCGACAGCGTTGCAATGCTGCCCTCAGGATTTGCCATATTTCCAGATGCTACTGAACCTGCAAGAGGAGGAGGAGGCTGTCTGGTCACTCTCGCATTCCAGATTATGATCGACTCTCACGTCACTAACAAACCCTCTATCTGTTCAGTTAGCTCTATTAACAACTTGCTTATGAATACTGTTGAGAAGGTCAAAGCTCTGGTCAACAGCGCCGAGCCCTCCAAATAA 2673 0.4643 MARSKNNNASSANGNLLLPNTQHVNTPVVPVAVGGGGSNQNNVEVIAPSGSVNPQPPKRRRYNRHTPQQRNHMEEFFKECPHPDDKQRKELSALLGLTPLQIKFWFQNKRTQVKSSQDRCDNDGLRLANQDLRAENESYRNILDRTKCLECGGPSPFEEQKLIAENFVLRQEIERVKKLLTNLFIQAPQTSNPKMMPTHELHNNTDIAGPSLNNNGAVSGVNNNDVIMPSLSLYDQLLGNFNSNLPSFPDNNVMAPTTAEGVVAGVNFLPPQDTNNMSSMGWVYEDDDMAPLSSLFDDGLDNNNFMLPAGLQLNEGAGVLINDDSNNNLLPNLVGEYVPPQYYNDNTNTNININMMMPSSSSTVNNQGVGVGSSLLRRLLLPIVLANGRVSDTAKVIELALESLEEFKILALAAANNNNNLLWVLGDYNAEILNEKEYFRTFPNGMGPKTAGFRSESSRDSMVVPINHITLIEILMDVGQWSRVFCGIVSKAAILEVLSKGPEGSYDGCIQVMSAQFQIASTYVPPREYDMVRYCKQLEDGSWAVVDVSLDSMRPSPTAAFSCSRRRPSGCLIQPLPDGFSSKVTWVEHVEVDDKLPVAHSIYKCLIESCLAFGARRWMALLNGQCQRIAATLITHIPQGQHSGICFTLTNREVRKSLMKLSERMVKSFYIGVGHATPQGWTTLTPAAAGVHNIVRIMTRNVENDPGSPTGIVISAATSFNLTATPQSFFDSIRNETFRTQWDVLVAGGTVQQVGRIENGRDPANCVSMLRVESSNPIHRNLIILEESGRDSTGWVVVFSPLEISSVNALMAGQHPDSVAMLPSGFAIFPDATEPARGGGGCLVTLAFQIMIDSHVTNKPSICSVSSINNLLMNTVEKVKALVNSAEPSK* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2409 890 Gene3D - 448 611 IPR023393 -
Aev09g2409 890 CDD START_ArGLABRA2_like 394 627 - -
Aev09g2409 890 SUPERFAMILY Homeodomain-like 48 115 IPR009057 -
Aev09g2409 890 ProSitePatterns 'Homeobox' domain signature. 91 114 IPR017970 GO:0000981|GO:0006355
Aev09g2409 890 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 371 884 IPR042160 -
Aev09g2409 890 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 53 207 IPR042160 -
Aev09g2409 890 SUPERFAMILY Bet v1-like 398 629 - -
Aev09g2409 890 Coils Coil 122 149 - -
Aev09g2409 890 SMART START_1 398 628 IPR002913 GO:0008289
Aev09g2409 890 Pfam Homeodomain 59 114 IPR001356 GO:0003677
Aev09g2409 890 Gene3D - 48 125 - -
Aev09g2409 890 ProSiteProfiles START domain profile. 423 631 IPR002913 GO:0008289
Aev09g2409 890 MobiDBLite consensus disorder prediction 39 68 - -
Aev09g2409 890 CDD homeodomain 58 117 IPR001356 GO:0003677
Aev09g2409 890 Pfam START domain 422 628 IPR002913 GO:0008289
Aev09g2409 890 ProSiteProfiles 'Homeobox' domain profile. 56 116 IPR001356 GO:0003677
Aev09g2409 890 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 371 884 - -
Aev09g2409 890 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 53 207 - -
Aev09g2409 890 MobiDBLite consensus disorder prediction 1 21 - -
Aev09g2409 890 SUPERFAMILY Bet v1-like 653 855 - -
Aev09g2409 890 SMART HOX_1 57 120 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2409 Aev-Chr9 26186437 26190939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2409 391 884 Homeobox Transcription Factor Family AT4G04890 50.098 1.59e-163 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev09g2409 START 1.7e-43 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2409 K09338 - thj:104812923 493.426