Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2408 ATGTTCTCTCAGAATCTGGTACTCTCCGCAGAAAACCCTAGACCCCCAGCGTTTCACCAATTACTCTCTTCTTCTTCGGTTTCCGCGAAACCCATGAGCAATGAGATCATCGTACAGAAGCCACCACCTTCGATTCTCGTCGGCAGGTTCAAGGCACTGCTCAAGCAGCGCGACGACGAGCTCAGGGATTCGTTGCCGCCGGGGGCGCACTTGCCTCCTCCCTCCACCGACGAAATCGTGCAGCTCTACGAGCTGCTACTGTCGGAGCTCACGTGCAATCTGAAGCCAATCATCACCGATCTCACTATCATCGCCGAACAACAGAGAGAGCATGCTAAGGGCATCGCCGAAGCAATTTGTACTCGCATTCTCGAGGTGCCTGCAGATCAAAAGCTTCCTTCACTCTATCTTTTGGACAGTATCGTGAAGAATTTTGGTCAGGAATATGTTAGATACTTCTCAATACGTCTGCCTGAAGTTTTCTGTGAGGCATTCAGGCAGGTTCAGCCTAATTTGCACCCGGCTATGCGCCATCTCTTTGGTACTTGGTCAAAAGTTTTTCCTCCTCCTGTCCTGCGCAAGATTGAAGCTGAGTTGCAACTTTCTCAAGCAGTTAATAATCAATCATCCACCATGAATCCCCTCAGGGCATCTGAATCTCCTCGACCAAGTCATGGCATACATGTAAATCCAAAGTACTTGAGGCAATTGGAGCGCTCAACCATGGATAGTGTTAACGGTGAAAAGTTCGACTTGTCAGGAAAGGCTAGTAATTCAAATTTTGGCCTTGTAGCTAGTAAGACAAATCAGTTTGCATCTAGCAGGCTTGGAATATCATCTTCCCCTTCAAGAATTAGTTTTGATAGGCCTTTGTCTGCACCTGTAGATGAATATGCAGTTGACAGTTCTGCTGGCAGGATAGTTGAGAGGGAGTCTCCTCATAATTATGGAGTACCCAAAGCAGTAGGTAGAGAGGAAGAGTTGAGTGAATGGCAACGAAAGCAGTTTCCTGGTGATGGTCGAAATCGGTTTCAGACTTCTATGACGTACAGTCTTAGTAATGGACATCAACGTCAAAGTCCAAGAGCTCTAATTGATGCATACGGGAGTGACAAAAGCCATGAAACTTCAAGCAATAAGCCTCTGTTAGTTGATAGGCTGGATAGAAATGGTTTAGACAACAAATTGTTATCAACATCTTGGCAGAATACAGAAGAGGAGGAGTTTGATTGGGAAGACATGAGTCCAACATTAGTAGACCACAATAGGAATAATGGTCTCCTGCCATTGACAGCTGGTTTCTCCCGGGAAAAGCCTGTCAACGTTGCAGCTAACGCAATTTTGTCAGAGCAAGATTCCAGGAAGGGTTGGCCTGGTGGGTCCCAGCTTCATCCAGCAGATGATTCTACCATTATGGCACCAGATGCATTTCCCTCTTCAGCTTATGGCCGCGGATCCGTGGGTCAGTTATCTGGATTCCAAAATCAAATTAATCAGGGTCTGGGTTCTCGTCAGCCTCATGATACTTGGAAGATTTCTCATCCTTCGCAAAACATCTTAAATATTAGGGGACAAGCAAGAGGTCTTTTGATGCCTCCTATTGATAACATTCCCAATACTGACGTAAACCTCTATGGGATTCGGCCTGCAGGGTCCAGGATGGTTTCTGGTCTTGCCACCAATGTGGAAGCTCGTCCGCCAGTTTTGCCTGCATCTTTTGAAATAAGGCCTTCTGTAACTGCACATGCCACTCGTCCTCCTGGCTTAAATCCGATATTTCCGATGCAAAAACATGTCAGGAGTCAGTTTGAAGTGATGAATACTAGTAATCCCATTTTGAATCATGGTCCAAATAAATCTTTGTTTATGCCTGAACAGCCGTTGGACACTGTTGAGAACAAGGATGCAGCCAAAGGGAAGATACATCAGTTGCCTAATCAGCTGGCTGGATTGATTTCAAACCATGGACAAGCCCCACAGCTACATTATTTTCCATCTCGGGATCCATCATCCTCACAATTTAGTCATGGGAACTCTTTGCAAGGACATGGTGCTTCTATAGGTGCAGCCATGTCAAATCCGTTACCTGGTGCACAATTTCCTTTACCAGTCCAAGGTAATGCAAATAACTCCTTGCAATTACAGGGGGGTGCCCATCCACCTTTGCCTCCTGGTCGCCCTCCTGCTCCATCTCAAATGTTACTTCATCCAAATGCTGGTCCATATGGGCCAAGCCAACAGCCGACTGTTGCATATTCTAATTTAATTAATTCACTTATGTCCCAAGGCGTGATCTCATTGGCTAACCAGCCCCCTTTACAGGATTCTGTTGGAACTGAGTTCAATCCAGATATTCTGAAGGTTCGTCTGGAGCCTGCAGTCATTGCCTTGTATGGAGCCCTCCCTAGACAATGCACAACTTGTGGACTCCGATTTAAATGCCAAGAGGAGCACAGCAGTCACATGGATTGGCATGTGACTAAGAACCGGATGTCTAAAAGTCGTAAGCAAAAGCCATCTCGTAAGTGGTTTGTTAGTGACAGGATGTGGCTTAGTGGTGCAGAGGCATTGGGAACAGAATCAGTTCCAGGTTTTTTGCCAACTGAGACCCTAGAGGAGAAGAAGGATGACGAAGAATTGGCAGTGCCAGCGGAAGAGGACCAGAATACATGTGCATTATGTGGTGAACCTTTTGAAGAGTTTTACAGTGATGAGATGGAGGAATGGATGTATAGAGGAGCTGTATACCTCAATGCACCCACAGGAGCAACAGCGGGCATGGACAGGTCACAGTTAGGCCCCATCATTCATGCCAAATGCAGATCAGAGTCTAATGTGGCCCCTTCTGAAGATTTTGGCCTCGATGAAGGGGGTGCCAATGATGAGGGCAGTCAAAGAAAGCGAATGCGGAGTTGA 2916 0.465 MFSQNLVLSAENPRPPAFHQLLSSSSVSAKPMSNEIIVQKPPPSILVGRFKALLKQRDDELRDSLPPGAHLPPPSTDEIVQLYELLLSELTCNLKPIITDLTIIAEQQREHAKGIAEAICTRILEVPADQKLPSLYLLDSIVKNFGQEYVRYFSIRLPEVFCEAFRQVQPNLHPAMRHLFGTWSKVFPPPVLRKIEAELQLSQAVNNQSSTMNPLRASESPRPSHGIHVNPKYLRQLERSTMDSVNGEKFDLSGKASNSNFGLVASKTNQFASSRLGISSSPSRISFDRPLSAPVDEYAVDSSAGRIVERESPHNYGVPKAVGREEELSEWQRKQFPGDGRNRFQTSMTYSLSNGHQRQSPRALIDAYGSDKSHETSSNKPLLVDRLDRNGLDNKLLSTSWQNTEEEEFDWEDMSPTLVDHNRNNGLLPLTAGFSREKPVNVAANAILSEQDSRKGWPGGSQLHPADDSTIMAPDAFPSSAYGRGSVGQLSGFQNQINQGLGSRQPHDTWKISHPSQNILNIRGQARGLLMPPIDNIPNTDVNLYGIRPAGSRMVSGLATNVEARPPVLPASFEIRPSVTAHATRPPGLNPIFPMQKHVRSQFEVMNTSNPILNHGPNKSLFMPEQPLDTVENKDAAKGKIHQLPNQLAGLISNHGQAPQLHYFPSRDPSSSQFSHGNSLQGHGASIGAAMSNPLPGAQFPLPVQGNANNSLQLQGGAHPPLPPGRPPAPSQMLLHPNAGPYGPSQQPTVAYSNLINSLMSQGVISLANQPPLQDSVGTEFNPDILKVRLEPAVIALYGALPRQCTTCGLRFKCQEEHSSHMDWHVTKNRMSKSRKQKPSRKWFVSDRMWLSGAEALGTESVPGFLPTETLEEKKDDEELAVPAEEDQNTCALCGEPFEEFYSDEMEEWMYRGAVYLNAPTGATAGMDRSQLGPIIHAKCRSESNVAPSEDFGLDEGGANDEGSQRKRMRS* 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2408 971 Pfam CID domain 94 194 IPR006569 -
Aev09g2408 971 ProSiteProfiles CID domain profile. 75 203 IPR006569 -
Aev09g2408 971 MobiDBLite consensus disorder prediction 667 727 - -
Aev09g2408 971 CDD CID_Pcf11 80 200 - -
Aev09g2408 971 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 44 946 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Aev09g2408 971 Gene3D - 73 201 IPR008942 -
Aev09g2408 971 PANTHER POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 44 946 - -
Aev09g2408 971 MobiDBLite consensus disorder prediction 946 971 - -
Aev09g2408 971 MobiDBLite consensus disorder prediction 667 686 - -
Aev09g2408 971 ProSitePatterns Zinc finger C2H2 type domain signature. 805 825 IPR013087 -
Aev09g2408 971 MobiDBLite consensus disorder prediction 206 228 - -
Aev09g2408 971 SMART 558neu5 78 200 IPR006569 -
Aev09g2408 971 SUPERFAMILY ENTH/VHS domain 74 200 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2408 Aev-Chr9 26178738 26183987 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2408 711 971 C2H2 Transcription Factor Family AT4G04885 65.399 4.65e-103 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2408 K14400 - gmx:100794796 1426.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2408 09 26178738 26183987 Aev09g2408 09 26178738 26183987 ECH