Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2396 ATGTCCCACTTCAAAATCTCATCATCAGGTGCTACCCATGTTTTGCTCTGCTTCACATTATCAGCGATGATCATTGCACTGATAACCGCCAAATCTTCCGAAGCAGCGAGCGACGATGACGAGTTCTTGAGCCCTTTATGTCCCAACAACGCCAGCACTTTCACTCCCAACAGCACTTACCATTCCAACCTCAACCAACTCCTCTCATGGCTCTCATCCAACTCCTCCACCCTCAAAAACGGTTACTACAACACCACCATCGCCGCCAACGACCCCAACAACACCATATACGGCTCCTTTCTCTGCCGCGAAGACCTGACCCCGCACGCTTGCGGAGACTGCGTTTCCACGGCAGAGAAAGAAGTGTTCGAGTACTGTCCAGTGGAGAAGAGCTCAATGATTTGGAAAACAGAGTGCTATGTGCGTTTCTCAGAACAACCCTTCTTCTCAGTACCTGACCAGAGTCCTTTGATTTACCGAAAGGGAGGGTCCGCTGGATCAGATCCGAATCGGTTCATGGAAGTGGTTGGGGAAACCATGAACGCGGTGGCGGATGAAGCCGCAAGCGGTGGTGCTGACAAGAAGTTTGGTACCAAGGAAGCAAATGTTTCGGTGTTCCAAACTCTGTACACGGCGGCGCAGTGTACACCGGATTTGTCAGAGTATTTGTGCAGAAATTGCCTCAGATTTTTGATCGGGCAATTACCTTCTTGCTGTAATGGGAGTGTGAATGTAATCATGAGGGTTCCCAGCTGTAATTTTAGGTATGAAATGTACCCTTTCTACAATACGGTGTCGTCTTTTGTCCCTACTACTACTACTACCGCCTCACCGCCACAACAACAACCAGAGCCAAATCCCAAAGATGAATCGCGGTTATCAACAGCGGTAATAATCGCAATTGTGACTCCCATAGTGTTTGTTTTGCTGGTTACTTTTGCGTTCTGGATCATATGTGCAAGAGCAAGAAGAAACAAGTATAGTTCGATGCTGGATGACAAAGTTGAAATTTCAAGCGTAGAAATCTTGCAATTTGATTTTGATACAATCGTAGAGGCTACAAACAACTTCTCTCATGATAATAAATTGGGCAAAGGAGGATTTGGTGAAGTTTACAAGGGTGCACTACCTAACAGGCAAGAAGTTGCTGTGAAGAGGCTATCAAAAAGCTCTCAACAAGGATCAAATGAATTCAAGAATGAGGTTGTTTTGATTGCTAAACTTCAACACAGAAATCTTGTTAGGCTACTAGGATTTTGCTTGGATGGGGAAGAAAAGATGCTTATCTATGAATTTGTCCCTAACAAGAGTTTGGACAAGTTCCTATTTGATCCTGACCAAGGACGGAAACAATTGAATTGGTCACGACGATACAAAATTATAGAAGGAGTTGCGCGAGGAATGCTTTATCTTCATGAAGATTCTCGACTCAAAATCATACATCGCGATCTAAAAGCTGGTAACGTATTACTAAATGAGAATTTAAATCCAAAAATTTCAGATTTTGGGATGGCAAGAATTGTTGGTTCCGGTCAAATTCAAGAAAAAACAAACAAAATTGTTGGAACAATTGGATACATGTCTCCGGAATATGCTATTCATGGACGCATTTCTATAAAAGTGGACGTTTTTAGCTTTGGTGTTCTAGTATTAGAGATAATAAGTGGAAAGAAGATCACCTCCTTCTATGGATCACGGTACGGTGGGAATCTCTTGGGCAATCCAGAACATGAACAACTCATTGTTGGCAGTGGTGCCTTAACACATCTTGTCGATCTTTTGAAGAGGCACAAGGATGGCTTAACCTTTCGTGCAGTTACTAATCTCGTTCATGAGAATAGCAGCATTAAAACCTGTGCCAGGTACTATGCGATTTCGAGGTTTTGA 1887 0.4346 MSHFKISSSGATHVLLCFTLSAMIIALITAKSSEAASDDDEFLSPLCPNNASTFTPNSTYHSNLNQLLSWLSSNSSTLKNGYYNTTIAANDPNNTIYGSFLCREDLTPHACGDCVSTAEKEVFEYCPVEKSSMIWKTECYVRFSEQPFFSVPDQSPLIYRKGGSAGSDPNRFMEVVGETMNAVADEAASGGADKKFGTKEANVSVFQTLYTAAQCTPDLSEYLCRNCLRFLIGQLPSCCNGSVNVIMRVPSCNFRYEMYPFYNTVSSFVPTTTTTASPPQQQPEPNPKDESRLSTAVIIAIVTPIVFVLLVTFAFWIICARARRNKYSSMLDDKVEISSVEILQFDFDTIVEATNNFSHDNKLGKGGFGEVYKGALPNRQEVAVKRLSKSSQQGSNEFKNEVVLIAKLQHRNLVRLLGFCLDGEEKMLIYEFVPNKSLDKFLFDPDQGRKQLNWSRRYKIIEGVARGMLYLHEDSRLKIIHRDLKAGNVLLNENLNPKISDFGMARIVGSGQIQEKTNKIVGTIGYMSPEYAIHGRISIKVDVFSFGVLVLEIISGKKITSFYGSRYGGNLLGNPEHEQLIVGSGALTHLVDLLKRHKDGLTFRAVTNLVHENSSIKTCARYYAISRF* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2396 628 Pfam Salt stress response/antifungal 168 258 IPR002902 -
Aev09g2396 628 Pfam Salt stress response/antifungal 47 145 IPR002902 -
Aev09g2396 628 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 283 566 - -
Aev09g2396 628 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 28 266 - -
Aev09g2396 628 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 283 566 - -
Aev09g2396 628 Pfam Protein tyrosine and serine/threonine kinase 360 557 IPR001245 GO:0004672|GO:0006468
Aev09g2396 628 SMART serkin_6 357 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev09g2396 628 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 28 266 - -
Aev09g2396 628 Gene3D Transferase(Phosphotransferase) domain 1 433 615 - -
Aev09g2396 628 ProSitePatterns Protein kinases ATP-binding region signature. 363 385 IPR017441 GO:0005524
Aev09g2396 628 SUPERFAMILY Protein kinase-like (PK-like) 331 559 IPR011009 -
Aev09g2396 628 Gene3D - 39 148 IPR038408 -
Aev09g2396 628 Gene3D - 161 261 IPR038408 -
Aev09g2396 628 Gene3D Phosphorylase Kinase; domain 1 318 432 - -
Aev09g2396 628 ProSiteProfiles Gnk2-homologous domain profile. 42 148 IPR002902 -
Aev09g2396 628 ProSiteProfiles Protein kinase domain profile. 357 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev09g2396 628 ProSiteProfiles Gnk2-homologous domain profile. 154 261 IPR002902 -
Aev09g2396 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 479 491 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2396 Aev-Chr9 26086584 26092850 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2396 17 572 Receptor kinase-like Gene Family AT4G05200 48.850 3.40e-178 520
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aev09g2396 PK_Tyr_Ser-Thr 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2396 - - oeu:111407315 548.125