LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev09g2395	ATGAACTTGCATAGGCTAATGAGAGCTTCTTATTATGTTCTGCTCTGCTTCACTCTGAACATTATCACATTATTAACAACAGAAGCAGCCACTGATGAGTCCTATGCTACAATTTACTGTCCAAACAACACATACTCTCCCAACACCCCTTACCAAAACAACCTCAATCAACTCATTTCATGGCTTTCATCAAACTCCTCCACCCGCCAAAACGGTTACTACAACACCACAGTCGCCGGTCCCACCAACAACACCATCTACGGTGCCTTTCTCTGCCGCGGAGATCTCACCACCACCGCCTGCCAAGACTGTGTCTCCGCCGCATCGAAAAGACTGCTCCAAGACTGTCCCAACGAGAAGCAAGCACTGATCTGGTTCGCAGAGTGCATGGTGCGTTACTCCGACCAGTCCTTCTTCTCCATATCCTCCCAAGAGCCCGTGCGTTCGCTGTATAACACCGCCAATGTCTCAGATCAAACCAATTTCATGAACTTGTTGTCGGATACGATCTACGCGGCAGCGGACGAGGCGGCGAAGGGTGGTGCTGAGAAGAAGTATGCGACAAAGGAAGCGAATGCTTCGCTGTTCCGAACTCTGTACACGTTGGCACAGTGCACACCGGATTTATCGCAGCTTGGCTGCCAAAAGTGTCTCGCAGTAGCAATTGCGGAAATACCTTCTTGCTGTAATGGGAAGCAAGGAGCAAGAGTGTTGATTCCTAGTTGTAATATTCGGTACGAGATATCCCCCTTTTACCAGCAGGTGCCTCTGTCTGTGCCTGTGCCTGTGCCCACACCACCAGAACAACAACCAAGTATGCCAAACTTGAAAGATAATAAATCAAAATCAGGGATATCAACAGGAGTAATCATTGCTATTGTGGCTCCAATTGTGGCTATTTTGCTTATTACCTCCTTTGCTTTCTGGATTATATCTACAAGGGCAAGAAGAAAGAAGTACAACTCGGTGCCACTGCCAGATGAAAGTGTTCAAATTTCTAGCACAGAGTTCTTGCAATTTGATTTTGATACAATCACAAGGGCCACAAACAACTTCTGTGATGAAAATAAATTAGGGGAAGGGGGATTCGGTGCGGTTTATAAGGGCAAACTACCAAATGGGCATGATGTTGCTGTGAAGAGGCTATCAAGAAACTCTAGACAAGGAGGAGATGAATTCAAGAATGAGGTGTTTTTGGTGGCCAAACTCCAACACAGAAATCTGGTTAGGTTATTGGGATTTTGCTTAGATGGAGAAGAAAAGATGCTGATATATGAATTCGTGCCTAACAAAAGCCTTGATCATTTTCTATTTGATCCTGAAAAACAACCACAGTTGAATTGGATGACACGATACAAGATAATAGAAGGAATTGCTCGAGGGATGTTATATCTTCATGAAGATTCTCGACTCAGAATCATACATCGTGATCTTAAAGCAAGTAATGTATTACTTGATGAGAATTTAAATCCAAAGATTTCAGATTTTGGTATGGCAAGAATATTTGGTGGTGATCAAACTCAAGCAAACACAAACAGAGTTGTTGGAACACTTGGATACATGTCTCCGGAATATGCACTGCATGGACACGTTTCAGTTAAAGTAGATGTGTATAGTTTTGGCGTCCTAATTTTGGAGATAATAAGTGGAAAGAAGATAACATCTTTCTATGAATCCAACTATGGTGGGGACCTATTGAATTATTCTTGGAAACTTTGGAGAGATGGGACTCCATTGGAGTTATTGGGCATGACATTAAGAGGTTCATCATCATATTCAAGAGCAGAAGTGATTAGATGCATCCACATTGGGTTATCTTGTGTTCAAGAAGATCCAACTCAAAGGCCAACCATGCAAACCATAGTTCTGATGCTAAACAGCCATTCAGTCACTCTTGCAACTCCTCAACAACCTGCGGGTTATAGTCATAGCAAAACTCATTCGAGATCCCTGATTAATGAATCAAATGGCTCAGATAATAAGTCCACAAGTCAATCGGTCTCTGTGCTCGTGGATGAATCATCCATCACTGATGTCTACCCTCGATAG	2049	0.4319	MNLHRLMRASYYVLLCFTLNIITLLTTEAATDESYATIYCPNNTYSPNTPYQNNLNQLISWLSSNSSTRQNGYYNTTVAGPTNNTIYGAFLCRGDLTTTACQDCVSAASKRLLQDCPNEKQALIWFAECMVRYSDQSFFSISSQEPVRSLYNTANVSDQTNFMNLLSDTIYAAADEAAKGGAEKKYATKEANASLFRTLYTLAQCTPDLSQLGCQKCLAVAIAEIPSCCNGKQGARVLIPSCNIRYEISPFYQQVPLSVPVPVPTPPEQQPSMPNLKDNKSKSGISTGVIIAIVAPIVAILLITSFAFWIISTRARRKKYNSVPLPDESVQISSTEFLQFDFDTITRATNNFCDENKLGEGGFGAVYKGKLPNGHDVAVKRLSRNSRQGGDEFKNEVFLVAKLQHRNLVRLLGFCLDGEEKMLIYEFVPNKSLDHFLFDPEKQPQLNWMTRYKIIEGIARGMLYLHEDSRLRIIHRDLKASNVLLDENLNPKISDFGMARIFGGDQTQANTNRVVGTLGYMSPEYALHGHVSVKVDVYSFGVLILEIISGKKITSFYESNYGGDLLNYSWKLWRDGTPLELLGMTLRGSSSYSRAEVIRCIHIGLSCVQEDPTQRPTMQTIVLMLNSHSVTLATPQQPAGYSHSKTHSRSLINESNGSDNKSTSQSVSVLVDESSITDVYPR*	683

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev09g2395	682	Gene3D	Transferase(Phosphotransferase) domain 1	428	640	-	-
	Aev09g2395	682	PANTHER	RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8	9	657	-	-
	Aev09g2395	682	SUPERFAMILY	Protein kinase-like (PK-like)	330	625	IPR011009	-
	Aev09g2395	682	Pfam	Salt stress response/antifungal	40	135	IPR002902	-
	Aev09g2395	682	Pfam	Salt stress response/antifungal	159	247	IPR002902	-
	Aev09g2395	682	PANTHER	CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN	9	657	-	-
	Aev09g2395	682	MobiDBLite	consensus disorder prediction	635	673	-	-
	Aev09g2395	682	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	473	485	IPR008271	GO:0004672\|GO:0006468
	Aev09g2395	682	SMART	serkin_6	352	631	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev09g2395	682	ProSiteProfiles	Gnk2-homologous domain profile.	33	138	IPR002902	-
	Aev09g2395	682	Pfam	Protein tyrosine and serine/threonine kinase	356	623	IPR001245	GO:0004672\|GO:0006468
	Aev09g2395	682	Gene3D	Phosphorylase Kinase; domain 1	312	427	-	-
	Aev09g2395	682	ProSitePatterns	Protein kinases ATP-binding region signature.	358	380	IPR017441	GO:0005524
	Aev09g2395	682	Gene3D	-	32	138	IPR038408	-
	Aev09g2395	682	Gene3D	-	144	251	IPR038408	-
	Aev09g2395	682	ProSiteProfiles	Gnk2-homologous domain profile.	144	251	IPR002902	-
	Aev09g2395	682	ProSiteProfiles	Protein kinase domain profile.	352	631	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Aev09g2395	682	MobiDBLite	consensus disorder prediction	635	682	-	-
	Aev09g2395	682	CDD	STKc_IRAK	358	626	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev09g2395	Aev-Chr9	26081040	26083896	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aev09g2395	17	682	Receptor kinase-like Gene Family	AT4G05200	49.778	0.0	645

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Aev09g2395		PK_Tyr_Ser-Thr	1.2e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aev09g2395	-		-	csin:114306417	734.561