Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2394 ATGGAGCTTCAGAAGCGCCAAGATCAAAGCCTCTCGGAGAGGAAAGGCCAGAAGCGCAAGCTAGATGACCAGCTCCACGGCCACCGCCAGATCTCCGCCATGCCGCCGACCGCTGAGGAGCTCGCCGCCATCCTCGCCCAAGTCTCCGAGCAGGTGCTCATTCTGTACTCCGCCTTCACGTGGAACGAAGCCGATCGAGCTGCGGCAAAGCGCGCCACTTACGCTCTCGCCGATCTCGCCAAGAACGAGGAAGTGGTGAACGTGATTGTTGAAGGAGGAGCGGTTCCTGCTTTGGTTATGCATCTTCAGGGGCCGCCTCTTTGCGACGACGATCGTGTTCAGAAGCCATTGCCGTTTGAGCACGAGGTTGAGAAAGGAAGCGCTTTCGCACTAGGACTTCTTGCCGTCAAGCCAGAACATCAACAACTCATTGTTGACAGTGGTGCCTTAACACATCTTGTCGATCTTTTGAAGAGGCATAAGGATAGCTTAACTTTCCGTGCCGTTAATAGTCTCATTCGAAGGGCTGCAGATGCAATTACTAATCTTGCACATGAGAATAGCAGCATTAAAACCTGTGTCAGGATGGAAGGTGGAATTCCACCACTTGTTCATTTGCTTGAATTTGCTGATCCAAAAGTACAAAGAGCAGCGGCTGGTGCACTGCGAACCTTGGCTTTCAAAAATGATGAAAATAAAAATCAGATTGTTGAATGTAATGCTCTTCCGACGTTGATTCTGATGCTTCACTCTGAAGATGCAGCTATTCATTATGAAGCGGTTGGTGTGATTGGAAATCTGGTCCACTCGTCCCCTCATATAAAGAAGGAAGTTCTTCTTGCTGGAGCTTTACAACCAGTTATTGGATTGCTAAGTTCCTGCTGCTCTGAAAGCCAGAGGGAAGCTGCTTTGTTACTTGGACAGTTTGCAGCAACAGATTCAGACTGTAAGGTTCACATTGTACAGCGGGGTGCTGTTCGGCCTTTGATAGAAATGCTTCAATCTCCGGATGTGCAACTTAGAGAAATGTCTGCCTTTGCATTAGGGAGATTAGCCCAGGATACACATAACCAAGCTGGTATAGCTCACAATGGGGGCTTAGTTCCATTACTCAAGCTTCTTGACTCGAAAAATGGGTCTTTGCAACATAATGCTGCTTTTGCTCTTTATGGCCTTGCAGATAATGAGGATAATGTGTCCGATTTTATTAGGGTTGGTGGAATTCAGAGACTGCAGGAAGGAGAGTTTATTGTTCAAGCAACTAAAGATTGTGTTGCAAAGACGTTGAAAAGATTAGAGGAGAAGATTCATGGCCGTGTGTTGAACTATTTGTTATATCTTTTGCGAGTTTCAGAAAAGGGTTTTCAAAGGCGTATTGCTTTGGTTCTTGCACATCTCTGTTCAGCGGATGATCAGAGAAGAATTTTTATTGATTACCATGGTCTTGAGTTGCTTATTGGGCTTCTTGGCTCGTCTAGCTCAAAACAGCAACTTGAAGGTGCTGTATCTTTATGCAAGTTGGCCAACAAAGCCTCGACTCTGTCTCCTGTAGATGCTGCTCCCCCTTCTCCGACACAACAGGTCTATTTGGGAGAGCAGTATGTAAACAATGATACATTGTCAGACGTCACATTTTTGGTTGAAGGCAAACGATTTTATGCTCACCGAATTTGTCTATTAGCATCTTCAGATGCATTTCGTGCGATGTTTGATGGTGGCTACAGGGAGAAGGATGCAAGGGACATAGAAATTCCAAATATTAGATGGGAAGTTTTTGAGCTGATGATGAGATTTATATATACTGGATCAGTTGATGTCACTCCCGATATTGCTCAAGATCTTCTCCGAGCAGCTGATCAGTATCTTTTAGAAGGGCTCAAGAGGCTCTGTGAATACACAATTGCTCAGGATATATCACTGGAGAATGTGTCAAGTATGTATGAACTTTCAGAAGCATTTAATGCAATATCTTTGAGGCACTCATGCATCCTTTTTATCTTGGAGCAGTTTGATAAACTGAGTGCAAGGCCAGGGCACACTCTTCTGATTCAACGTATAGTACCAGAGATACGTAATTACTTCGTTAAAGTTCTGACAAAGGGCAGCAACTCCCATGGCCATTACATTTGA 2130 0.4507 MELQKRQDQSLSERKGQKRKLDDQLHGHRQISAMPPTAEELAAILAQVSEQVLILYSAFTWNEADRAAAKRATYALADLAKNEEVVNVIVEGGAVPALVMHLQGPPLCDDDRVQKPLPFEHEVEKGSAFALGLLAVKPEHQQLIVDSGALTHLVDLLKRHKDSLTFRAVNSLIRRAADAITNLAHENSSIKTCVRMEGGIPPLVHLLEFADPKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLHSEDAAIHYEAVGVIGNLVHSSPHIKKEVLLAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDTHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVSDFIRVGGIQRLQEGEFIVQATKDCVAKTLKRLEEKIHGRVLNYLLYLLRVSEKGFQRRIALVLAHLCSADDQRRIFIDYHGLELLIGLLGSSSSKQQLEGAVSLCKLANKASTLSPVDAAPPSPTQQVYLGEQYVNNDTLSDVTFLVEGKRFYAHRICLLASSDAFRAMFDGGYREKDARDIEIPNIRWEVFELMMRFIYTGSVDVTPDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFNAISLRHSCILFILEQFDKLSARPGHTLLIQRIVPEIRNYFVKVLTKGSNSHGHYI* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2394 709 Gene3D - 276 517 IPR011989 -
Aev09g2394 709 ProSiteProfiles BTB domain profile. 541 608 IPR000210 GO:0005515
Aev09g2394 709 Gene3D Potassium Channel Kv1.1; Chain A 518 667 IPR011333 -
Aev09g2394 709 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 148 198 IPR000225 GO:0005515
Aev09g2394 709 Gene3D - 37 170 IPR011989 -
Aev09g2394 709 SMART arm_5 469 509 IPR000225 GO:0005515
Aev09g2394 709 SMART arm_5 354 394 IPR000225 GO:0005515
Aev09g2394 709 SMART arm_5 82 136 IPR000225 GO:0005515
Aev09g2394 709 SMART arm_5 271 311 IPR000225 GO:0005515
Aev09g2394 709 SMART arm_5 229 269 IPR000225 GO:0005515
Aev09g2394 709 SMART arm_5 137 185 IPR000225 GO:0005515
Aev09g2394 709 SMART arm_5 187 227 IPR000225 GO:0005515
Aev09g2394 709 SMART arm_5 313 353 IPR000225 GO:0005515
Aev09g2394 709 CDD BTB_POZ_ARIA_plant 528 643 - -
Aev09g2394 709 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 324 366 IPR000225 GO:0005515
Aev09g2394 709 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 4 703 IPR044282 -
Aev09g2394 709 Gene3D - 171 275 IPR011989 -
Aev09g2394 709 Pfam BTB/POZ domain 534 636 IPR000210 GO:0005515
Aev09g2394 709 SUPERFAMILY ARM repeat 63 413 IPR016024 -
Aev09g2394 709 Pfam Armadillo/beta-catenin-like repeat 229 268 IPR000225 GO:0005515
Aev09g2394 709 Pfam Armadillo/beta-catenin-like repeat 191 226 IPR000225 GO:0005515
Aev09g2394 709 Pfam Armadillo/beta-catenin-like repeat 313 352 IPR000225 GO:0005515
Aev09g2394 709 MobiDBLite consensus disorder prediction 1 27 - -
Aev09g2394 709 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 4 703 - -
Aev09g2394 709 SUPERFAMILY ARM repeat 439 510 IPR016024 -
Aev09g2394 709 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 240 282 IPR000225 GO:0005515
Aev09g2394 709 SUPERFAMILY POZ domain 532 635 IPR011333 -
Aev09g2394 709 SMART BTB_4 541 638 IPR000210 GO:0005515
Aev09g2394 709 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 198 233 IPR000225 GO:0005515
Aev09g2394 709 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 365 407 IPR000225 GO:0005515
Aev09g2394 709 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2394 Aev-Chr9 26074187 26079832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2394 200 523 U-box Gene Family AT3G46510 26.284 4.52e-15 77.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aev09g2394 BTB 2.5e-26 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2394 - - gmx:100784348 1182.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2394 09 26074187 26079832 Aev09g2394 09 26074187 26079832 ECH
Aev05g1208 05 8450998 8456326 Aev09g2394 09 26074187 26079832 PCT