Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2387 ATGCTGGCGAATCACCTCCAAAACGGCGTTGGATCGGAGTTTCTTGTTTGGTCGCAGATTCCGAACTTGGAGGAAGAATCGCGGTTTCTAGACGACATTGTCTCACTCTCGAGCAAGAGCGATGGCGGCGCTGTTGAGAGCCTTGACTATGAAGTCATAGAGAATTATGCTTATCGTCAAGAACAGGCGCAAAGGGGAAAACTTTACGTGAGCTATTTGCTGGTGGTTAAATGGTTCTTTGCTTTGGTCATTGGCATCGGAACTGGACTTGCTGCTGTTTTCATCAACCTTTCTGTTGAAAACTTTGCTGGGTGGAAGTTCTCAATGACGTTTAATATAATTCAGAAATCATACCTGGCTGGATTTGTGATATATGTCTTGATCAACTTGATTTTGGTCTACTCCTCTGTATATATCATCACTCATTTTGCACCAGCAGCTGCTGGATCTGGTATTCCTGAGATAAAGGGTTACTTAAATGGAGTTGATATTCATGGCATTCTACTTTTCAGAACTTTGATTGGAAAGATATTTGGAAGCATTGGTTCAGTGGGAGGAGGTCTTGCTCTGGGTAAAGAAGGTCCTCTTGTTCATACTGGTGCTTGTATTGCTTCTTTGCTTGGACAAGGTGGATCCACTAAATATCATCTAAATTCAAGGTGGTTTCAAGTATTCAAAAGTGACAGGGATCGCCGTGATCTTGTGACCTGTGGGTGTGCTGCTGGTGTTGCTGCTGCATTTAGAGCTCCGGTTGGTGGTGTATTGTTTGCATTGGAAGAGGTTACATCCTGGTGGAGGAGCCAATTGATGTGGCGTGTCTTTTTCACTTCTGCTATTGTGGCTGTTGTGGTGCGAACAGCAATGGGATGGTGTAAGAGTGGAAAATGTGGACATTTTGGATCTGGTGGATTCATAATATGGGATATATCAGATGGTCAAGAGGATTATTCATTTGCAGAGCTATTTCCAATGGCTATTATTGGGGTGATTGGTGGTCTGCTAGGGGCATTGTTTAACCAGCTTACTTTATATATTACTACTTGGCGACGAAATCATATGCACAAGAAAGGGAACCGAGTCAAGATTATTGAAGCATGCCTCATCTCGGTATTAACTTCTGTAATTTCATTTGGCTTGCCGCTTCTAAGAAATTGTACTCCATGCCCTGAACCTGATCCTGAATCTGGTATTGAATGTCCACGACCTCCTGGAATGTATGGGAACTATGTGAATTTCTTTTGTAGCAATGACAAGGAGTACAATGATCTTGCAACTATTTTTTTCAATACACAGGATGATGCCATTAGGAATTTGTTCAGTGCAAAGACTATAAATGAGTACAGCGCCCAAAGTTTGTTAACATTTTTGCTTATGTTTTACACTCTAGCAGTGGTGACATTTGGTACTGCTGTTCCAGCTGGGCAATTTGTTCCTGGTATAATGATAGGATCAACATATGGACGACTTGTTGGCATGTTTGTTGTAAAATATTACAGAAAGCTCAACATTGAAGAAGGAACATATGCTCTGCTGGGAGCTGCATCTTTTCTTGGAGGTTCAATGCGGATGACAGTTTCTCTGTGTGTCATTATGGTTGAAATCACTAATAATTTAAAGCTTTTACCTCTCATTATGCTTGTTCTTCTTATATCAAAGGCTGTTGGTGATGCTTTTAATGAGGGTCTTTATGAAGAGCAGGCCCGGCTGAGAGGTATCCCATTACTTGAATCAAGACCTAAATATGTGATGCGGAATATGACAGCAATTGAAGCTTGTGGGAGTGGAAGGGTGGTCTCCTTCCCTCGTGTTGCTAAGGTTGCAGATGTAGTTTCTATTTTGGGGAGCAATAAACACAATGGTTTTCCAGTGATTGAGCATACAAGAAGTGGAGAACCACTTGTTATTGGATTAGTGCTTCGGAGTCATTTATTGGTTATTCTGCAGTCAAAGGTTGATTTCCAGCTTAGTGCTTTACCCTCTGATCTCAGAGGTGTGGACAGGTCAATAAGGCATGATTCTGGTGAATTTGCAAAGCCTGTATCTAGTAAAGGAATGCGTATAGAAGATATACATTTAAGTTCGGATGACTTGGAAATGTACATAGATCTTGCTCCATTTTTGAATCCCTCGCCATATATTGTACCTGAAGACATGTCTTTGACAAAGGTCTACAATCTTTTCCGCCAACTTGGTTTGAGGCATTTATTCGTTGTTCCTCGTCCATCTCGTGTACTTGGTTTGATAACAAGAAAAGATTTGTTAATTGAGGACACAGAAAATGTCAATACAGTTGAGCTCCTGTCAACTAGTGTAAGAAATCAGCAACGAAATAAAAATTTAACAAGGAATGTAGATGCGGAGCGCCCACTGCTAAATGGTATTCTGGATCCAGAGCAGACTGGCTATGATTTAGTTGATTCGGTTTGTGTAAAGTAA 2436 0.4117 MLANHLQNGVGSEFLVWSQIPNLEEESRFLDDIVSLSSKSDGGAVESLDYEVIENYAYRQEQAQRGKLYVSYLLVVKWFFALVIGIGTGLAAVFINLSVENFAGWKFSMTFNIIQKSYLAGFVIYVLINLILVYSSVYIITHFAPAAAGSGIPEIKGYLNGVDIHGILLFRTLIGKIFGSIGSVGGGLALGKEGPLVHTGACIASLLGQGGSTKYHLNSRWFQVFKSDRDRRDLVTCGCAAGVAAAFRAPVGGVLFALEEVTSWWRSQLMWRVFFTSAIVAVVVRTAMGWCKSGKCGHFGSGGFIIWDISDGQEDYSFAELFPMAIIGVIGGLLGALFNQLTLYITTWRRNHMHKKGNRVKIIEACLISVLTSVISFGLPLLRNCTPCPEPDPESGIECPRPPGMYGNYVNFFCSNDKEYNDLATIFFNTQDDAIRNLFSAKTINEYSAQSLLTFLLMFYTLAVVTFGTAVPAGQFVPGIMIGSTYGRLVGMFVVKYYRKLNIEEGTYALLGAASFLGGSMRMTVSLCVIMVEITNNLKLLPLIMLVLLISKAVGDAFNEGLYEEQARLRGIPLLESRPKYVMRNMTAIEACGSGRVVSFPRVAKVADVVSILGSNKHNGFPVIEHTRSGEPLVIGLVLRSHLLVILQSKVDFQLSALPSDLRGVDRSIRHDSGEFAKPVSSKGMRIEDIHLSSDDLEMYIDLAPFLNPSPYIVPEDMSLTKVYNLFRQLGLRHLFVVPRPSRVLGLITRKDLLIEDTENVNTVELLSTSVRNQQRNKNLTRNVDAERPLLNGILDPEQTGYDLVDSVCVK* 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2387 811 SUPERFAMILY Clc chloride channel 55 577 IPR014743 -
Aev09g2387 811 SMART cbs_1 596 648 IPR000644 -
Aev09g2387 811 SMART cbs_1 710 758 IPR000644 -
Aev09g2387 811 Pfam CBS domain 708 754 IPR000644 -
Aev09g2387 811 SUPERFAMILY CBS-domain pair 581 754 IPR046342 -
Aev09g2387 811 ProSiteProfiles CBS domain profile. 707 764 IPR000644 -
Aev09g2387 811 CDD CBS_pair_voltage-gated_CLC_euk_bac 597 754 - -
Aev09g2387 811 PANTHER CHLORIDE CHANNEL PROTEIN CLC-D 4 793 - -
Aev09g2387 811 PRINTS Plant CLC chloride channel signature 293 300 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aev09g2387 811 PRINTS Plant CLC chloride channel signature 423 439 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aev09g2387 811 PRINTS Plant CLC chloride channel signature 51 59 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aev09g2387 811 PRINTS Plant CLC chloride channel signature 261 269 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aev09g2387 811 PRINTS Plant CLC chloride channel signature 275 285 IPR002251 GO:0005247|GO:0006821|GO:0016020
Aev09g2387 811 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 4 793 - -
Aev09g2387 811 CDD ClC_6_like 46 575 - -
Aev09g2387 811 Pfam Voltage gated chloride channel 135 555 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev09g2387 811 Gene3D - 596 761 IPR046342 -
Aev09g2387 811 PRINTS Chloride channel signature 471 491 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev09g2387 811 PRINTS Chloride channel signature 524 543 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev09g2387 811 PRINTS Chloride channel signature 506 522 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev09g2387 811 PRINTS Chloride channel signature 562 576 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev09g2387 811 PRINTS Chloride channel signature 145 162 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev09g2387 811 PRINTS Chloride channel signature 240 259 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev09g2387 811 PRINTS Chloride channel signature 176 195 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Aev09g2387 811 Gene3D Clc chloride channel 70 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2387 Aev-Chr9 26024210 26031385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2387 1 775 Ion Channels AT5G26240 83.634 0.0 1253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2387 K05016 - gmx:100811908 1402.5