Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2330 ATGGCCTCTCATTCCCTCAAAAGGGGAGGCCCTTATGATATCAACACTACACCATTCTTGCTCTCCCTTTTTCTCATCCTCATCTCAATCGCTCCTTCACACCAATCTGAATACTACTCTTCTTCCACCCTCCCTGAGCTAAATCCAAGGCTCTCAAAAGCCTACACAGCACTCCAAGCATGGAAGCACAAAATCACCTCAGACCCAAAGAACTTCACCTCAAACTGGTGTGGCCCCCATGTTTGCAACTACACTGGAATCTACTGTGCACCAGCACCAGATGACCCTCACATATACACAGTTGCTGGAATAGACCTAAACCATGCCACCATAACTGGTTCATTACCAGAAGAACTTGGCCTATTAACAGACCTAGCTCTCTTCCACATAAACACAAACAGGTTCTGTGGTTCCCTCCCAAACAGCTTCAGCTACCTTAAACTCCTCTTTGAGCTAGACATAAGCAACAACGATTTCTCAGGTCCATTCCCTGAGGTTGTTCTCTGCCTCCCATCACTGAAATTCCTGGACATAAGGTACAACAAGTTCCAAGGGAATGTTCCTTCTCGACTTTTCGACCTTAAACTCGATGCCCTTTTCATCAACAACAACAATTTTCAGTTCTCATTGCCAGAGAATTTCGGAGACACACCTGCCTCTGTTATTGTGTTTGCAAACAATGACCTCAGGGGATGTCTCCCGTCGAGTTTGTACAAAATGAAGGATACCCTTAACGAGATTATCATCACGAACAGTGGATTGAAGGGTTGTTTGCCTCGTGAAATTGGGGGTTTGGAAAAAGTGACGGTTTTTGATGTGAGCTTCAATGAGCTGGTTGGTGAATTGCCTGAAACCATGGGAGGGATGAAGAGCTTGGAGCAGTTGAATGTGGCGCATAACATGTTGTCTGGCACGATTCCGGAGAGTGTATGCAAGTTGCCGAGGTTGGAGAACTTCACGTACTCCTACAACTACTTCTGCGCCGAATCGCCGCTGTGTTTGAAGCTCAAACAGAGTGATGATCGCAAAAATTGTATTCCTTATAGGCCGTTGCAGAGGAGCCTTGATGACTGTGCCGCCTTTTATGCACGTCATGTTGATTGTACTGCCTTTGGCTGCTCCAGAAGTCCACCTCCACCGCCACCACCACCGCCTCCTCCACCTCCTCCTCCTCCACCACCACCACCGCCACCACCACCTCCTCCACCACCACCACCTCCTCCACCGCCGCCGCCGCCTCCCCCGGCAGCTTACTACCACTATCCATGA 1269 0.4878 MASHSLKRGGPYDINTTPFLLSLFLILISIAPSHQSEYYSSSTLPELNPRLSKAYTALQAWKHKITSDPKNFTSNWCGPHVCNYTGIYCAPAPDDPHIYTVAGIDLNHATITGSLPEELGLLTDLALFHINTNRFCGSLPNSFSYLKLLFELDISNNDFSGPFPEVVLCLPSLKFLDIRYNKFQGNVPSRLFDLKLDALFINNNNFQFSLPENFGDTPASVIVFANNDLRGCLPSSLYKMKDTLNEIIITNSGLKGCLPREIGGLEKVTVFDVSFNELVGELPETMGGMKSLEQLNVAHNMLSGTIPESVCKLPRLENFTYSYNYFCAESPLCLKLKQSDDRKNCIPYRPLQRSLDDCAAFYARHVDCTAFGCSRSPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPPAAYYHYP* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2330 422 MobiDBLite consensus disorder prediction 374 422 - -
Aev09g2330 422 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 6 26 383 - -
Aev09g2330 422 SUPERFAMILY L domain-like 54 333 - -
Aev09g2330 422 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 26 383 - -
Aev09g2330 422 Gene3D Ribonuclease Inhibitor 52 219 IPR032675 -
Aev09g2330 422 Pfam Leucine rich repeat N-terminal domain 55 89 IPR013210 -
Aev09g2330 422 PRINTS Proline rich extensin signature 375 387 - -
Aev09g2330 422 PRINTS Proline rich extensin signature 387 408 - -
Aev09g2330 422 PRINTS Proline rich extensin signature 409 422 - -
Aev09g2330 422 Gene3D Ribonuclease Inhibitor 220 347 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2330 Aev-Chr9 25664115 25665383 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2330 45 381 Leucine-rich Repeat extension Gene Families AT3G22800 68.639 6.55e-165 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2330 - - gmx:100818195 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2330 09 25664115 25665383 Aev09g2330 09 25664115 25665383 ECH