Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2325 ATGGCTGGTAGGCTACCTGGTGTTGGATTGTCACAAAGAAAAAGATCTTCACCATCAGAACACAACCACCATAGATATGATCACCATCATCATTATCATGCTACCTACCGACCCTCCTACCTAAGGGATTATGAATCATTGGAGGAACCATCACCATGGATTTCGGAGACTGCCTTGGATGAGGCTACTCTCAAGGCAAGGCAACGCCTTCAGAAGAAGCTTGGACACTTCTTTACCTCTATTTCCAGGGAAGGTGAGAATCCGAAAAAAGAAGGAACAGGGAGGGAAAGCACAATCCAGAAGAGGGATGCAGGAGCAGGAATAGGTCGGAAGTTACTGTCAAGTTCATGGTTACTGCTTCCAAACAAGTTCAGGAAAGAAAGAAAAGTGTGTGCAGTTTGCTTAGAAGATTTTGAGCAAGAGGAGCATAATGTTATGAACCTCTCTTGCTCTCATAAGTACCATTCAGACTGCCTTATCCCCTGGCTTGCAGCTCATCCTCATTGTCCCTGCTGCAGAACTCCAGTTGACCACTGA 537 0.4562 MAGRLPGVGLSQRKRSSPSEHNHHRYDHHHHYHATYRPSYLRDYESLEEPSPWISETALDEATLKARQRLQKKLGHFFTSISREGENPKKEGTGRESTIQKRDAGAGIGRKLLSSSWLLLPNKFRKERKVCAVCLEDFEQEEHNVMNLSCSHKYHSDCLIPWLAAHPHCPCCRTPVDH* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2325 178 MobiDBLite consensus disorder prediction 82 103 - -
Aev09g2325 178 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 109 177 IPR013083 -
Aev09g2325 178 Pfam Ring finger domain 130 173 IPR001841 -
Aev09g2325 178 MobiDBLite consensus disorder prediction 1 31 - -
Aev09g2325 178 CDD RING-H2_PA-TM-RING 130 173 - -
Aev09g2325 178 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 28 175 - -
Aev09g2325 178 SMART ring_2 131 172 IPR001841 -
Aev09g2325 178 SUPERFAMILY RING/U-box 130 176 - -
Aev09g2325 178 MobiDBLite consensus disorder prediction 83 98 - -
Aev09g2325 178 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 28 175 - -
Aev09g2325 178 ProSiteProfiles Zinc finger RING-type profile. 131 173 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2325 Aev-Chr9 25639897 25641151 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2325 126 173 C3H Transcription Factor Family AT3G58720 47.917 8.42e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2325 - - gmx:100527548 211.46