Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2317 ATGAATCCTCTTGGTAGAGTGAAGGAGGAGTATCTAGGAGAGAGCTCATCCTATTCCCAATATCCGGTAATGGATGGTGGTCCACAACCACAACCAATGGAGGGGCTCCATGAGAGTGGTCCTCCACCATTCCTAACAAAGACGTATGACATAGTGGAAGACCCTTCCACAAATCACATAGTGTCATGGAGCAAAGGGAACAATAGCTTTGTTGTTTGGGATCCACAAGCTTTCTCCATTACTCTTCTTCCAAGATTCTTCAAGCACAACAACTTCTCTAGCTTTGTAAGGCAACTCAACACATATGGGTTTAAAAAGATTGATCCAGATAGGTGGGAATTTGCTAATGAGATGTTTCTTAGAGGGCAAAGAATTCTTTTGAAGAACATTAAAAGGAGGAAGACACATCAAAACCAACCTCACCATCATCAAGCTCCACAGCAAGCTCTACTAGACTCCTCGTGTGTCGAAGTTGGAAGGTTTGGATTAGATGGAGAAGTTGACAGGTTGCGGCGCGACAGGCAAGCACTGATGATGGAGTTGGTTAAACTGAGGCAACAGCAGCAGAATACAAAGGCTCACATTGAAGCAATGGAAGGTAGGCTTAAAAGGACTGAACAGAAACAGCAGCACATGATGAGTTTCTTGGCAAGGGCAATGCATAGTCCAAGTTTTGTGCAACAATTGGTTCAACAAAAGGAGTGGAGGAAGGAATTAGAAGAACTAGTTTTCTCTAATAAGAGGATGAGAACTATTGATCAAGGCCCTAGTAATAATGTTGTTGTTGAAGTAGGTGATGATGATGATTATGATGATCAAGGCTGTTTAGGTTTTGTTAAACTTGAATCATCATCACATGATGATGAGGGGTTGGATTTTGAGGTGTCAGATATGATGGACCTTGCTTTGAATGATATTGTGGTAAATGGTAGCCAAAAGAGCATAAATGAGGATTATCATCATCACAATAATGTTGGTGGAAGTAGTAGAGGTAAAGAGATTGATGATGAGATCTGGCAAGATTTGTTCAATGAGGGTTTTGAAGATGAACATGTCTTAGGTGTTGAAGATTTGGCTCACCAACTTGCTTATTTAGCCTCTACTCCTAAATAG 1113 0.4115 MNPLGRVKEEYLGESSSYSQYPVMDGGPQPQPMEGLHESGPPPFLTKTYDIVEDPSTNHIVSWSKGNNSFVVWDPQAFSITLLPRFFKHNNFSSFVRQLNTYGFKKIDPDRWEFANEMFLRGQRILLKNIKRRKTHQNQPHHHQAPQQALLDSSCVEVGRFGLDGEVDRLRRDRQALMMELVKLRQQQQNTKAHIEAMEGRLKRTEQKQQHMMSFLARAMHSPSFVQQLVQQKEWRKELEELVFSNKRMRTIDQGPSNNVVVEVGDDDDYDDQGCLGFVKLESSSHDDEGLDFEVSDMMDLALNDIVVNGSQKSINEDYHHHNNVGGSSRGKEIDDEIWQDLFNEGFEDEHVLGVEDLAHQLAYLASTPK* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2317 370 PRINTS Heat shock factor (HSF) domain signature 44 67 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev09g2317 370 PRINTS Heat shock factor (HSF) domain signature 82 94 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev09g2317 370 PRINTS Heat shock factor (HSF) domain signature 95 107 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev09g2317 370 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 11 353 IPR027725 -
Aev09g2317 370 Pfam HSF-type DNA-binding 44 133 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev09g2317 370 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 11 353 - -
Aev09g2317 370 MobiDBLite consensus disorder prediction 15 40 - -
Aev09g2317 370 SUPERFAMILY "Winged helix" DNA-binding domain 39 133 IPR036390 -
Aev09g2317 370 ProSitePatterns HSF-type DNA-binding domain signature. 83 107 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev09g2317 370 Gene3D - 36 135 IPR036388 -
Aev09g2317 370 SMART hsfneu3 40 133 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev09g2317 370 Coils Coil 167 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2317 Aev-Chr9 25584069 25585820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2317 30 368 HSF AT3G22830 55.586 7.50e-123 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Aev09g2317 HSF_DNA-bind 8.4e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2317 K09419 - gmx:100811941 450.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2317 09 25584069 25585820 Aev09g2317 09 25584069 25585820 ECH