Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2307 ATGCCAGTGAGGCAGATGAAGGAGAACCCAGAGCAACACCTTGTGATCAAACCCCATTTGCAGAACCACATGAATCCATCAAAGGCACAAAAAGCTGCACAAAATGGGAAAGGTCCACCACCACCACAGCTACAACCAACACAAGATAGCCACAGCCAAACCTCACCTCAGCAAAGGAACAGAGGGAGAAGAAGAGGCAGAGGTGGCAGAAAATCTGACCAAGGAGAGGTTTTGATGAGGCCAAGTTGCAGGCCTTGTACTGTGGTCACAAATGCTGCAAATGGAAATGTTGAAAATGGGGGCATCTCTGGTGTCACAGACATGGGTTTTCCCACTTCAAGCAAGTCCTTGATCTTTGCTCGCAGGCCTGGGTATGGACAAGTTGGGACAAAATGCATTGTTAAGGCTAACCACTTCTTTGCTGAGTTACCAGACAAGGACTTGAACCAGTATGATGTTACTATTACCCCGGAAGTGTCTTCGAAAACAGTAAACAGGTCCATCATAGCAGAACTTGTGAGGCTGTATAAAGAGTCTGACTTAGGGATGAGGCTCCCAGCTTATGATGGCAGGAAAAGTCTGTACACTGCAGGACAGCTCCCTTTTGCCTGGAGAGAGTTTAAGATAAAGCTTCTTGATGATGAGGATGGAGTTAATGGCCCCAAGCGGGAAAGAGAATATAGTGTGGTGATCAAGTTTGTTGCTCGGGCAAACTTGCATCACTTGGGCCAGTTTCTAGCCGGTAGGCGAGCTGATGGACCACAGGAGGCACTTCAAATTCTTGACATTGTGCTGAGGGAACTATCAACTAGGAGGTACTGTCCTGTTGGGAGATCCTTCTTTTCACCTGATATTAGAACACCACAGCGGCTTGGAGAGGGATTGGAGTCATGGTGTGGGTTTTACCAGAGCATAAGGCCTACTCAGATGGGCCTTTCCCTCAACATTGATATGGCATCTGCTGCATTCATTGAGCCTCTTCCAGTGGTAGAATTTGTTGGCCAGCTACTAGGAAAAGATGTGCTGTCAAGGCCATTGTCAGATGCTGATCGCATTAAGATCAAGAAAGCCCTTAGAGGAGTTAAGGTTGAAGTAACACACAGAGGAAGTGTAAGAAGAAAATATCGTGTTTCGGGCTTGACTTCTCAACCAACAAGAGAACTTGTGTTCCCTGTTGATGAGAACTCAACTATGAAGTCAGTGGTTGAATACTTCCAAGAGATGTATGGTTTCACCATTCAACATACTCACCTTCCATGTCTTCAAGTAGGAAACCAAAAGAAGGCAAACTACTTACCTATGGAGGCCTGCAAAATTGTTGAGGGGCAACGTTATACAAAAAGATTAAATGAGAAGCAAATTACTGCTCTCCTCAAAGTCACTTGCCAGAGACCGCGTGATCGAGAAAATGACATTTTGCGGACTGTGCAGCATAATGCTTACGATGAAGATCCTTATGCAAAGGAATTTGGGATTAAAATCAGCGAAAAGCTAGCTTCTGTCGAAGCACGGATTCTTCCTGCCCCTTGGCTTAAATACCACGAGAGTGGGAAAGAAAAGAACTGTTTACCCCAAGTTGGTCAATGGAATATGATGAACAAGAAAATGATTAATGGAATGACTGTTAACCGGTGGGCATGCATTAATTTTTCGCGGAATGTGCAAGACAGTGTTGCTCGCACATTTTGTAATGAGCTTGCTCAAATGTGTCAAGTTTCCGGCATGGAGTTTAATCCAGAGCCTGTTATCCCCATCTACAATGCCAAGCCAGAACAAGTAGAGAAAGCTTTGAAGCATGTTTATCATGTGTCAACCAACAAAACCAAAGGAAAAGAGTTGGAACTATTGTTAGCAATATTGCCTGACAGCAATGGGTCCCTATACGGCGATCTCAAGCGCATTTGTGAAACCGACCTTGGTTTAATTTCACAATGCTGTCTGACAAAGCACGTCTTTAAAATCACTAAACAGTACTTGGCCAATGTGTCTCTGAAGATCAATGTTAAGATGGGAGGTAGAAACACTGTTCTTCTAGACGCTGTAAGCTGCAGAATTCCATTGGTCAGTGACATTCCAACCATAATATTTGGAGCAGATGTTACTCACCCTGAAAATGGAGAAGACTCTAGCCCCTCAATAGCAGCTGTGGTAGCATCTCAGGATTGGCCTGAAGTGACAAAATATGCTGGTTTGGTGTGTGCTCAAGCTCATAGACAGGAACTTATACAAGATTTGTACAAAACATGGCATGACCCCGTTCGCGGCACAGTCAGTGGTGGCATGATCCGGGATTTGTTGATTTCTTTTAGAAAGGCAACAGGACAGAAGCCACTAAGGATTATATTTTACAGGGATGGTGTAAGTGAAGGACAATTTTACCAAGTTCTGCTTTATGAGTTGGATGCAATCCGGAAGGCGTGCGCCTCCTTAGAACCAAACTATCAGCCTCCAGTTACCTTCATAGTTGTGCAAAAAAGACATCATACTCGGTTATTCGCAAACAACCATCGGGACAGGAGCAGTACTGATAAGAGTGGGAATATATTGCCTGGGACTGTTGTTGATACTAAGATATGCCATCCAACAGAATTCGATTTTTACCTCTGCAGTCATGCTGGCATCCAGGGTACAAGTCGGCCGGCTCATTACCATGTTCTGTGGGATGAAAACAACTTTACAGCAGATGGAATTCAGTCCTTGACAAACAATCTCTGTTATACATATGCAAGGTGTACGCGCTCCGTATCAGTTGTTCCTCCAGCATATTATGCACATTTAGCAGCTTTCAGAGCCCGGTTCTACATGGAACCGGATATGCAAGAGAATGGCTCTACAGGCGGCGGCGGTGGTGGTAATGCCGGTCATGGTTCAAAGGTAAGCCGAGCTGCCGGAGAGTGCGGCGTCAAGCCATTGCCAGCATTGAAGGAAAATGTGAAGAGAGTAATGTTTTACTGTTAG 2958 0.449 MPVRQMKENPEQHLVIKPHLQNHMNPSKAQKAAQNGKGPPPPQLQPTQDSHSQTSPQQRNRGRRRGRGGRKSDQGEVLMRPSCRPCTVVTNAANGNVENGGISGVTDMGFPTSSKSLIFARRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSKTVNRSIIAELVRLYKESDLGMRLPAYDGRKSLYTAGQLPFAWREFKIKLLDDEDGVNGPKREREYSVVIKFVARANLHHLGQFLAGRRADGPQEALQILDIVLRELSTRRYCPVGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVLSRPLSDADRIKIKKALRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIQHTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTVQHNAYDEDPYAKEFGIKISEKLASVEARILPAPWLKYHESGKEKNCLPQVGQWNMMNKKMINGMTVNRWACINFSRNVQDSVARTFCNELAQMCQVSGMEFNPEPVIPIYNAKPEQVEKALKHVYHVSTNKTKGKELELLLAILPDSNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLISFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDRSSTDKSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGSTGGGGGGNAGHGSKVSRAAGECGVKPLPALKENVKRVMFYC* 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2307 985 Pfam N-terminal domain of argonaute 131 265 IPR032474 -
Aev09g2307 985 Gene3D - 505 678 - -
Aev09g2307 985 SMART DUF1785_2 274 326 IPR014811 -
Aev09g2307 985 CDD Piwi_ago-like 485 935 IPR045246 -
Aev09g2307 985 Pfam Argonaute linker 2 domain 467 513 IPR032472 -
Aev09g2307 985 ProSiteProfiles PAZ domain profile. 327 441 IPR003100 GO:0005515
Aev09g2307 985 SUPERFAMILY PAZ domain 321 481 IPR036085 GO:0005515
Aev09g2307 985 ProSiteProfiles Piwi domain profile. 615 936 IPR003165 GO:0003676
Aev09g2307 985 PANTHER PROTEIN ARGONAUTE 10 60 984 - -
Aev09g2307 985 Pfam Argonaute linker 1 domain 275 324 IPR014811 -
Aev09g2307 985 Gene3D - 684 985 IPR036397 GO:0003676
Aev09g2307 985 SMART PAZ_2_a_3 331 463 IPR003100 GO:0005515
Aev09g2307 985 Gene3D paz domain 320 445 - -
Aev09g2307 985 Pfam Piwi domain 616 935 IPR003165 GO:0003676
Aev09g2307 985 SMART Piwi_a_2 615 936 IPR003165 GO:0003676
Aev09g2307 985 Pfam PAZ domain 353 457 IPR003100 GO:0005515
Aev09g2307 985 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 60 984 - -
Aev09g2307 985 SUPERFAMILY Ribonuclease H-like 607 937 IPR012337 -
Aev09g2307 985 CDD PAZ_argonaute_like 326 440 - -
Aev09g2307 985 Pfam Mid domain of argonaute 524 601 IPR032473 -
Aev09g2307 985 MobiDBLite consensus disorder prediction 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2307 Aev-Chr9 25502568 25508870 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2307 1 985 Eukaryotic Initiation Factors Gene Family AT5G43810 82.100 0.0 1661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2307 K11593 - gmx:100816999 1826.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2307 09 25502568 25508870 Aev09g2307 09 25502568 25508870 ECH