Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2293 ATGTTTCCTGCTCCTGCTTTACAACGGGGCAATGAGCTGGTGATCCACTTCTCCGACGAAGAAGAAGATTGTGTCAACAACCACCAAATCTCCCAAGATCGGATCCTCCTCCTCAATAATAATCATCCTGATTCTCACAATAATAACAAATTTGCTAGTACAAGCTCAAACAACAACTTAATATTTTATGGAGGTGCTGGTGCGAGTCATGATCATCAACAACAAGAACAACAAGTTGGTCCTAATAAGAATAAGGAGAGGAAGATGGTCCATAGGGAGATCGAAAAGCAAAGGAGAAAATACATGGCTACCCTTCACGCTTCCCTTAGATCCCTTCTCCCTCTTCAATTCATCAAGGGGAAGCGTTCGGTGTCGGATCAAATGAACGAGGCAGTGAATTACATAAAGCATCTGCAGGAGAATGTCAAAGAACTGAGTGCGAAGAGGGATGAACTCAAGAAACAATATGAGATCAGCAATAGCAGGGTTTTCAGCGTGGAGCAGAGCAGCAATAAGAATGGAGGAAGTGAGGTGGGAATTGAGGTTACTGCGAGTGGCTTCAGAGATAACCAGGAAACAGTGATCCCACTCTCAAAGTTGCTGCAACTCTTGTTTGAAGAGGGCCTTGAAGTTGTCACTTGCCTTTCCACTCATGTCAATGGAACATTACTTCACACACTACACTGTCAGGTAAAAAATTCCGACTCTGTCGATCTATCTGAGCTGAGAAGGAAATTTGCCAATATAGTTCCATCATTTAGGTGTTCTAATTAG 774 0.4302 MFPAPALQRGNELVIHFSDEEEDCVNNHQISQDRILLLNNNHPDSHNNNKFASTSSNNNLIFYGGAGASHDHQQQEQQVGPNKNKERKMVHREIEKQRRKYMATLHASLRSLLPLQFIKGKRSVSDQMNEAVNYIKHLQENVKELSAKRDELKKQYEISNSRVFSVEQSSNKNGGSEVGIEVTASGFRDNQETVIPLSKLLQLLFEEGLEVVTCLSTHVNGTLLHTLHCQVKNSDSVDLSELRRKFANIVPSFRCSN* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2293 257 Coils Coil 128 162 - -
Aev09g2293 257 Pfam Helix-loop-helix DNA-binding domain 87 139 IPR011598 GO:0046983
Aev09g2293 257 CDD bHLH_AtORG2_like 87 155 - -
Aev09g2293 257 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 86 138 IPR011598 GO:0046983
Aev09g2293 257 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 8 255 - -
Aev09g2293 257 MobiDBLite consensus disorder prediction 62 90 - -
Aev09g2293 257 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 8 255 IPR015660 GO:0003700|GO:0006357
Aev09g2293 257 Gene3D - 77 170 IPR036638 GO:0046983
Aev09g2293 257 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 85 165 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2293 Aev-Chr9 25404169 25405396 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2293 91 247 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 41.317 5.50e-34 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev09g2293 HLH 4.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2293 - - gmx:100804315 244.202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2293 09 25404169 25405396 Aev09g2293 09 25404169 25405396 ECH
Aev05g2994 05 30615979 30617150 Aev09g2293 09 25404169 25405396 PCT