Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2292 ATGATGATGAATCCTTTCCAGTACCCAATTAGTGATGATGAGCTATACTTTCAGATTCCATCTGACAATAATTATTATTCCCTACCGATCCAACAAGCAGCAGCAGCAGCAGAAGAAGATAACAATCAGATCTTGCAAGTTGATCCTAAGACTATGATGGATGGCAGCAGTGTTCCTCCTCGTACAAATCAAAAGGGAAAGGGAAAGGGGAAGCAGCGAACAGAAGATTATAATCATCATCAGATGGATCAAAATGAAAACAAGAAGTGGATGCATCGGGAGATAGAAAAGCAAAGGAGGCAAGAAATGGCCAGACTTTGCACCACCTTTAGATCTCTTCTTCCTCTTCACTATATTAAGGGAAAGAGGTCAACTTCAGATCACATGCATGGGGGTGTGAATTACATAAAAGACCTGCAGGAGAAGGTGCAGCAGTTGCAAGCAAAGAGGGATGAGTTAATGAAGCTGTGTGATGAGACTGGAAAGTACTTGAATAATAATTATAATAATCAAATTCCAACTTTTGTAATAGTTGAGCCATTTTGTGGAGGGATTCAGATAAAGTGTAGTTATAGCTTGAGGAGTAATGATGCGTTTCCATTGTCAAGGGTGCTGGACATACTGCTTAAACAAGGCCTTCATTTCCTCAATTCTACTTCCACTAAGACACACCATGACTCTAGGATCATACACACTATTCGGTCAGAGGATCCATATATGAGGACTGAGACATACTACACTGAACTGCAAAGAAAGCTTGCCGAAGCAATATCTTCTTCATCAAGCTAG 789 0.4043 MMMNPFQYPISDDELYFQIPSDNNYYSLPIQQAAAAAEEDNNQILQVDPKTMMDGSSVPPRTNQKGKGKGKQRTEDYNHHQMDQNENKKWMHREIEKQRRQEMARLCTTFRSLLPLHYIKGKRSTSDHMHGGVNYIKDLQEKVQQLQAKRDELMKLCDETGKYLNNNYNNQIPTFVIVEPFCGGIQIKCSYSLRSNDAFPLSRVLDILLKQGLHFLNSTSTKTHHDSRIIHTIRSEDPYMRTETYYTELQRKLAEAISSSSS* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2292 262 MobiDBLite consensus disorder prediction 48 85 - -
Aev09g2292 262 MobiDBLite consensus disorder prediction 48 63 - -
Aev09g2292 262 Pfam Helix-loop-helix DNA-binding domain 89 140 IPR011598 GO:0046983
Aev09g2292 262 Gene3D - 77 167 IPR036638 GO:0046983
Aev09g2292 262 MobiDBLite consensus disorder prediction 68 85 - -
Aev09g2292 262 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 72 261 IPR015660 GO:0003700|GO:0006357
Aev09g2292 262 CDD bHLH_AtORG2_like 88 156 - -
Aev09g2292 262 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 87 139 IPR011598 GO:0046983
Aev09g2292 262 Coils Coil 136 159 - -
Aev09g2292 262 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 86 159 IPR036638 GO:0046983
Aev09g2292 262 PANTHER TRANSCRIPTION FACTOR 72 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2292 Aev-Chr9 25397040 25398160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2292 80 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 40.719 1.03e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev09g2292 HLH 1.7e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2292 - - adu:107466968 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2992 05 30592077 30593764 Aev09g2292 09 25397040 25398160 PCT