Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2286 ATGGGAGATAGGCAAGTGAGGCCGAGACCACCACCACCGCCTCCACTCTCTCCTCCTCTGTCACCGGCAACACCACCACCACCACCACGTCCACCGCTCCAACCTCAAACCCCTCCTCGACACATCACTATGCAAATGCACCCAAACTCCGCAACAAGAAAGCGTGCTCGACAAGTGGGTGACGAGAGCCTCAAGGTCGAACGTGAGAGAAGGTTGAAGATGTCTCACATGTTCACTCAACTTCAGGCCACTCTCCCCGCTCTCTTACCCAAGGCTACAAAGGAAGTGATTATAAACGACACCATCAAGTACATTAAGGATCTTGAGACCAAGAAGAAAAACTTGGAGGACCTCAAGGAATCAATGAAACAAGCTCGAGAAGCTGCGAAATTGACGGTTCCATGA 405 0.5136 MGDRQVRPRPPPPPPLSPPLSPATPPPPPRPPLQPQTPPRHITMQMHPNSATRKRARQVGDESLKVERERRLKMSHMFTQLQATLPALLPKATKEVIINDTIKYIKDLETKKKNLEDLKESMKQAREAAKLTVP* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2286 134 Coils Coil 98 132 - -
Aev09g2286 134 MobiDBLite consensus disorder prediction 1 62 - -
Aev09g2286 134 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 48 126 - -
Aev09g2286 134 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 65 125 IPR036638 GO:0046983
Aev09g2286 134 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 58 108 IPR011598 GO:0046983
Aev09g2286 134 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 48 126 - -
Aev09g2286 134 MobiDBLite consensus disorder prediction 1 38 - -
Aev09g2286 134 Gene3D - 48 133 IPR036638 GO:0046983
Aev09g2286 134 SMART finulus 64 114 IPR011598 GO:0046983
Aev09g2286 134 Pfam Helix-loop-helix DNA-binding domain 65 109 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2286 Aev-Chr9 25366111 25367796 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2286 64 116 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 47.170 2.21e-07 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev09g2286 HLH 1.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2286 - - aprc:113874666 98.2117