Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2276 ATGGAAGCGAATCCTTCACAAAACGGCGGTTTCAACGAAGAAGACGATAGCACTCGCAGCGTCGACGTCTCTCCCTCCGAGACTACACCAATGGCAAACCCGCCGCAGTCCACTTTTCCGGAACCGTCACCGCCGTCACCTGCTTCGGAGGCGGCGGCGCCCCTGAAAGAGGAGCTCACGGACCCGGAACAGAGCCTCGAAGAGCGGTATGGGATTGTTGCGACGCCGTTGACGACGATTGCTCCGGCAAAGAAGGCATCGAAGGACAGGCACACGAAAGTGGAGGGACGCGGCCGGAGAATCCGTATGCCGGCGACGTGCGCCGCCAGGATCTTCCAACTGACTAGGGAACTCGGCCACAAATCCGACGGGGAAACAATCCGGTGGTTGCTGGAACACGCTGAGCCCGCGATCATAGAAGCCACCGGCACCGGAACCATCCCGGCGATCGCAGTGTCTGTTGGCGGCACACTCAAGATCCCAACTTCATCAGCTGCAAGACCCCACGGAGAAGACACAGCAAGAAAGAAGAGGAGAAGAGCATCGAACAGCGAGTTCATTGACGTGAACGAAGAACAAGTTTCAGCCTCTTCAGGCCTCGCACCAATTGCACAGACCGCATATGGTGCTGGTGGTGGAGGGCTTGTTCCTGTGTGGCCTGTGGTTGGTGCTGGTGCTGTTGTCTCTAATGGTGGTGCTTCTGCAGGCCCTTTCTTCATGTTCCCAAATGGTGGTGGTGCTTCTTCTTCTTCTGGCGGTGGTGGTGTTCTGAACCAGCCTCAGTATTGGGCTATTCCTGCAAATGCGGCACCATTTTTCAACGTTCAAGCAAGGCCTATTTCGGGGTTTGTTTCAGCTATGCAGGTTCAGCAGCAGCCAGTGGTGGAGCAATTAGGCCATGTGGTGATGCATCATCAGACATTGGGGTCCACTTCTTCTTCCAATGGCTCCGCTAACTCTTCTTCTACCTTGGCCCCTACCTTGAGCTCAGGAACTAGTGCTACTTCTACTTCTGCTTCTGCTCCTGTTACTACCTCGCCTTCTGCTACTAGTGCTACCACCACCTCCACCACTCAGATGCTAAGGGATTTCTCTTTGGAGATTTATGATAAGAAGGAGTTGCAGTTCTTGGGTCGCTCTGGTGCTTCTGGAGGAAAATCGGAAAAGCCACCGAGTTCGAAGCCTTGA 1188 0.548 MEANPSQNGGFNEEDDSTRSVDVSPSETTPMANPPQSTFPEPSPPSPASEAAAPLKEELTDPEQSLEERYGIVATPLTTIAPAKKASKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIEATGTGTIPAIAVSVGGTLKIPTSSAARPHGEDTARKKRRRASNSEFIDVNEEQVSASSGLAPIAQTAYGAGGGGLVPVWPVVGAGAVVSNGGASAGPFFMFPNGGGASSSSGGGGVLNQPQYWAIPANAAPFFNVQARPISGFVSAMQVQQQPVVEQLGHVVMHHQTLGSTSSSNGSANSSSTLAPTLSSGTSATSTSASAPVTTSPSATSATTTSTTQMLRDFSLEIYDKKELQFLGRSGASGGKSEKPPSSKP* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2276 395 Pfam TCP family transcription factor 86 174 IPR017887 -
Aev09g2276 395 MobiDBLite consensus disorder prediction 307 356 - -
Aev09g2276 395 MobiDBLite consensus disorder prediction 35 49 - -
Aev09g2276 395 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 30 383 - -
Aev09g2276 395 MobiDBLite consensus disorder prediction 1 64 - -
Aev09g2276 395 MobiDBLite consensus disorder prediction 169 186 - -
Aev09g2276 395 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 30 383 IPR005333 GO:0003700
Aev09g2276 395 ProSiteProfiles TCP domain profile. 87 141 IPR017887 -
Aev09g2276 395 MobiDBLite consensus disorder prediction 161 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2276 Aev-Chr9 25310301 25311488 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2276 81 377 TCP Transcription Factor Family AT5G51910 46.926 7.80e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aev09g2276 TCP 3.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2276 - - aip:107617519 370.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2276 09 25310301 25311488 Aev09g2276 09 25310301 25311488 ECH