Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2268 ATGTTTTCCCTCACTCATATCACCGACCCACAAGCGTGTAGCAGCAGCAGCTCGGAGGGAATTACTGCTATGTCGTCGTTGTCGCCGGCGTCGGAAGGGGAGGTGTTTCTGGCGGCGAGCCACCCGAAGAAGAGGGCGGGGAGGAAGAAATTCAGGGAGACGCGTCACCCTGTGTACCGCGGCGTGCGGCGGAGGAACTCCGGGAAGTGGGTTTGCGAGGTGAGAGAGCCAAACAAGAAGACAAGGATATGGCTTGGGACATTCCCGAACGCCGAGATGGCGGCGCGTGCGCACGACGTGGCGGCGATCGCGCTTAGGGGAAGGTCTGCCTGTCTCAACTTCGCTGACTCCGCTTGCCTCCCTGTGCCCGCCACCACCGACGCCAGGGAGATCCAGAGGGCAGCGGCGGAGGCGGCGGAGGCATTCCGTTCGGTGGCGGAGAGAGAGGCGAATGAAGTGGTGATGCGGGAGGAGGGTGGTCCGGCGGTGGAGGTTATGGCGGAGATGGCATCGGCGGAGGTGGAGGAGGGGGTGCCGGAGATGTGGAGGAACATGGCGTTGATGTCACCGGCACATTACTTGGGGAGTGAGTATGGTGTTGATGACGTGGAATTATTTGATGATGCTGAAGTATCCTTGTGGAGTTATTCCATTTAA 657 0.6027 MFSLTHITDPQACSSSSSEGITAMSSLSPASEGEVFLAASHPKKRAGRKKFRETRHPVYRGVRRRNSGKWVCEVREPNKKTRIWLGTFPNAEMAARAHDVAAIALRGRSACLNFADSACLPVPATTDAREIQRAAAEAAEAFRSVAEREANEVVMREEGGPAVEVMAEMASAEVEEGVPEMWRNMALMSPAHYLGSEYGVDDVELFDDAEVSLWSYSI* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2268 218 MobiDBLite consensus disorder prediction 1 24 - -
Aev09g2268 218 SMART rav1_2 58 121 IPR001471 GO:0003700|GO:0006355
Aev09g2268 218 SUPERFAMILY DNA-binding domain 58 117 IPR016177 GO:0003677
Aev09g2268 218 ProSiteProfiles AP2/ERF domain profile. 58 115 IPR001471 GO:0003700|GO:0006355
Aev09g2268 218 Pfam AP2 domain 57 107 IPR001471 GO:0003700|GO:0006355
Aev09g2268 218 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 6 218 - -
Aev09g2268 218 Gene3D AP2/ERF domain 58 116 IPR036955 GO:0003700|GO:0006355
Aev09g2268 218 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 6 218 IPR045277 GO:0003700
Aev09g2268 218 CDD AP2 59 117 IPR001471 GO:0003700|GO:0006355
Aev09g2268 218 PRINTS Ethylene responsive element binding protein signature 59 70 IPR001471 GO:0003700|GO:0006355
Aev09g2268 218 PRINTS Ethylene responsive element binding protein signature 81 97 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2268 Aev-Chr9 25262047 25262703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2268 25 216 AP2-EREBP Transcription Factor Family AT5G51990 53.365 8.18e-61 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev09g2268 AP2 8.4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2268 - K09286 aprc:113872706 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2967 05 30398985 30399632 Aev09g2268 09 25262047 25262703 ECH
Aev09g2268 09 25262047 25262703 Aev09g2268 09 25262047 25262703 ECH
Aev05g2967 05 30398985 30399632 Aev09g2268 09 25262047 25262703 PCT