Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2250 ATGGCTGTGTCTCGCTGCAACCTCGTACTATGCTACCTTCTTCTCCTCCTGTTCCACCTCCTCCTCTGCTCCATTGCAGACCAAACCAACCAAAACCCAGAAAAAATTTCCCTCCTTTCCTTCAAAAACAGCCTCCACAACCCTCAGCTCCTCTCCTCGTGGCACCCTTCAACGCCGCACTGCGGCTGGGTCGGTGTAACGTGTCAACTCGGCCGAGTCACCTCGCTCTCCCTTCCCTCTCGCTTCCTCAGAGGAACACTTTTTTCCTCTTCCCTCTTCTCTTTAACCTCACTCACCGTCCTCGACCTCGGCGACAACCACCTCTCCGGCGAACTCCCCGGCGAACTCGGCGAGTTGACTCAGTTAGAGACCCTCCGACTCGGTTCCAACTCGTTCTCTGGGAATATTCCCCCGGAGCTGGGAAACCTCACTAGGCTTCGCACTCTCGACCTCTCCGGCAATGCCTTCGCCGGAAAACTGCCGGAGACAATCGGAAAAATGACGCAGCTTCAGTTCCTCGATCTCAGCAACAACCTCCTCTCAGGTTCTCTGCCTTTATCTATATTCACCGGTCCTGTATCATTGATTTCACTTGATATTTCCAACAACTCTTTTGCCGGCGAGGTTCCGCCGGAAATCGGGAACTGGAAGAACATAACTGCACTCTACATTGGGATGAACAAGTTGTCTGGTAGGTTACCTAAGGAAATTGGTGAGCTTTCAAAGCTTGAGCTTTTCTACTCGCCTTCATGTTCCTTTGAAGGTCCATTGCCGAAGGAAATGGCAAAGCTCAAGTCTCTGACGAAACTTGACCTCTCCTACAACCCTCTGAAGTGTTCCATCCCAGAGTTCATAGGGGAGTTGGAGAGCTTGAGAATTCTAGACCTTGTTTTTTGTCAGCTCAATGGGTCATTGCCACCTCAGCTCGGGAGCTGCAGGAACCTGAGGTATGTGATGGTCTCTTTCAACACTCTCTCTGGGGCACTCCCTGAGGAGCTCTCTGAGCTTCCTATTGTGACATTTTCTGCTGAGAAGAATCAGCTTGATGGGGCTTTGCCTTCTTGGCTTGGGAAGTGGACTAGTGTTGAGTCTCTCTTGCTTTCTGATAACCGGTTCTCTGGGGTGATTCCACCTGAGCTTGGGAATTGTTCCGTGATGGAGCATCTTACCTTGAGCAGCAACTTGTTGACTGGCCCTATACCTGAGGAGCTTTGTAATGCTGCCTCACTCATGGAGATTGATCTTGGTGACAACTTCCTCTCTGGTTCCATTGACAATGTGTTTGCCAGGTGTAAGAACCTTTCTCAGTTGGTTATGATGAACAACCAGATTGTTGGTTCTATACCACAGTACCTCTCAGAGCTTCCCTTGATTGTGCTGGAACTGGACTCCAACAATTTTAGTGGAATGATACCTTCTAGCCTGTGGAATTTATCAAACCTGTTGGAGTTCTCTGCTGCTAATAACCATTTGGAGGGTTCTCTTCCTGTGGAGATTGGGAATGCTGTTATTATAGAGAGGCTTGTTCTTAGCAATAATAGATTGACCGGTACTATACCAAAGGAAATTGGAAGGCTCGCGAGTCTCTCTGTTCTTAATCTGAATGGCAATATGCTTGAAGGGGATATTCCAACTGAGCTTTGTGACTGCATTTCTCTTACCACATTGGACCTTGGAAACAATAGACTGAATGGTTCTATTCCTGAGAAGCTGGTTGAGCTGAACCAATTGCAGTGCCTGGTTCTGTCTCACAATGATCTGTCCGGGCCTATTCCAGCCAGGAACTCTTCCTATTTTCGACAACTGACCATCCCAGATTTGAGCTTTTTTCAACACCTTGGTGTATTTGATCTTTCCCACAATAGATTGTCTGGCACTATACCTGATGAATTGGGGAGCTGTATGGTGGTTGTGGATCTTTTGATCAGCAACAACATGCTGTCTGGGAGTATTCCAAGATCGCTCTCACGCTTGACAAATCTAACAACTTTGGATTTGTCTGGCAACTTCTTGTCAGGTTCCATTCCTCCAGAACTTGGAGATGCCCTCAAGATGCAGGGTTTATATCTGGGAAACAATCAGCTCTCGGGTACCATCCCTGTGAGTTTTGGGAAGTTGAGTAGTTTGGTGAAGCTGAATTTGACAGCAAATAAGTTGTCTGGTCCAATTCCGATTAGTTTTGGGAACATGAAGGAATTGACACACTTGGACTTGAGCTCCAATGAGCTCAGTGGTGAGCTTCCATCCTCTCTGTCAACTGTGCAAAGTCTTGTTGGGCTTTATGTGCAGAAGAATAGGCTTTCTGGCCAAGTTGGGCAGCTCTTCTCAAACTCCATAACATGGAGGATTGAGACGGTGAATTTAAGTGATAATTGCTTCAGTGGGAACATGCCGCGATCATTGGGAAATCTTTCTTACTTGATGAATCTGGACCTTCATCGGAATATGTTGACTGGAGAGATTCCTCCAGACCTTGGGAATCTAATGCAACTGGAATATTTTGATGTTTCAGTTAATGAGTTATCTGGAAATATTCCTGAGAAGTTATGCAGCCTTGCTAATCTGAATTACCTAGATTTGTCTCAGAACAGATTGGAAGGTCCTATTCCCAGAAGTGGTATTTGCCAGAACCTATCCAGAGTTAGATTTGTTGGGAACAAAGATCTTTGTGGGCAGATGGTAGGTATTAAGTGTCAGATCAAAGGCATTTGCAGACCAGCATTTTGTAATGCATGGAGGATAGCAGCAATTGCCATTACAGTCATATTAATAACTGTAAGCATTGGTTTTGTTCTGCATAGATGGATTGGCAGGAGGCAAAATGATCCTGAGGAAATTGAGGAGCGCAAACTAAACAGCTATGTGGATAATAATCTTTACTTCTTGAGCAGTAGCAGATCGAAAGAACCTTTGAGTATCAATGTAGCAATGTTTGAGCAGCCTCTTCTGAAGTTAACCTTAGTCGATATCCTTGAAGCGACTGACAACTTCAGCAAGGCAAACATTATTGGAGATGGGGGTTTTGGAACTGTGTACAAGGCCACTCTACCTGATGGAAAGACGGTTGCAGTGAAGAAGCTTAGTGAAGCCAAAACGCAGGGTCATCGGGAGTTCATGGCTGAGATGGAAACCTTGGGCAAGGTGAAGCATCAAAATCTCGTTGCATTGCTTGGATATTGCTCAATGGGAGAGGAGAAGCTCCTTGTTTATGAATACATGGTAAATGGGAGCTTGGATCTTTGTGCATGTGAGACTCACATCACCACTGATATTGCCGGAACATTCGGTTACATTCCACCAGAGTATGGACAGAGCGGGAGGTCCACAACAAGAGGAGATGTCTACAGTTTTGGTGTGATTCTGCTTGAACTGGTGACTGGAAAAGAGCCAACTGGACCCGATTTCAAAGAGATCGAAGGCGGGAACTTGGTTGGATGGGTTGGTCAGAAGATCAAGAAGGGGCAGGCTGCTGATGTTCTTGATCCAATGGTTCTCGACGCGGATTCGAAGCAGGCAATGCTTCAAACGCTGCAGATTGCTTGTGTATGCCTCTCAGATAATCCTGTGAACAGGCCAACCATGCTCCAAGTGCACAAGTTCCTGAAGGGGATTAGAGGAGAGTAG 3624 0.4644 MAVSRCNLVLCYLLLLLFHLLLCSIADQTNQNPEKISLLSFKNSLHNPQLLSSWHPSTPHCGWVGVTCQLGRVTSLSLPSRFLRGTLFSSSLFSLTSLTVLDLGDNHLSGELPGELGELTQLETLRLGSNSFSGNIPPELGNLTRLRTLDLSGNAFAGKLPETIGKMTQLQFLDLSNNLLSGSLPLSIFTGPVSLISLDISNNSFAGEVPPEIGNWKNITALYIGMNKLSGRLPKEIGELSKLELFYSPSCSFEGPLPKEMAKLKSLTKLDLSYNPLKCSIPEFIGELESLRILDLVFCQLNGSLPPQLGSCRNLRYVMVSFNTLSGALPEELSELPIVTFSAEKNQLDGALPSWLGKWTSVESLLLSDNRFSGVIPPELGNCSVMEHLTLSSNLLTGPIPEELCNAASLMEIDLGDNFLSGSIDNVFARCKNLSQLVMMNNQIVGSIPQYLSELPLIVLELDSNNFSGMIPSSLWNLSNLLEFSAANNHLEGSLPVEIGNAVIIERLVLSNNRLTGTIPKEIGRLASLSVLNLNGNMLEGDIPTELCDCISLTTLDLGNNRLNGSIPEKLVELNQLQCLVLSHNDLSGPIPARNSSYFRQLTIPDLSFFQHLGVFDLSHNRLSGTIPDELGSCMVVVDLLISNNMLSGSIPRSLSRLTNLTTLDLSGNFLSGSIPPELGDALKMQGLYLGNNQLSGTIPVSFGKLSSLVKLNLTANKLSGPIPISFGNMKELTHLDLSSNELSGELPSSLSTVQSLVGLYVQKNRLSGQVGQLFSNSITWRIETVNLSDNCFSGNMPRSLGNLSYLMNLDLHRNMLTGEIPPDLGNLMQLEYFDVSVNELSGNIPEKLCSLANLNYLDLSQNRLEGPIPRSGICQNLSRVRFVGNKDLCGQMVGIKCQIKGICRPAFCNAWRIAAIAITVILITVSIGFVLHRWIGRRQNDPEEIEERKLNSYVDNNLYFLSSSRSKEPLSINVAMFEQPLLKLTLVDILEATDNFSKANIIGDGGFGTVYKATLPDGKTVAVKKLSEAKTQGHREFMAEMETLGKVKHQNLVALLGYCSMGEEKLLVYEYMVNGSLDLCACETHITTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPDFKEIEGGNLVGWVGQKIKKGQAADVLDPMVLDADSKQAMLQTLQIACVCLSDNPVNRPTMLQVHKFLKGIRGE* 1208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2250 1207 Pfam Protein tyrosine and serine/threonine kinase 1095 1201 IPR001245 GO:0004672|GO:0006468
Aev09g2250 1207 Pfam Protein tyrosine and serine/threonine kinase 1000 1079 IPR001245 GO:0004672|GO:0006468
Aev09g2250 1207 SUPERFAMILY L domain-like 599 891 - -
Aev09g2250 1207 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 340 427 - -
Aev09g2250 1207 Gene3D Ribonuclease Inhibitor 31 189 IPR032675 -
Aev09g2250 1207 SMART LRR_sd22_2 852 880 - -
Aev09g2250 1207 SMART LRR_sd22_2 550 576 - -
Aev09g2250 1207 SMART LRR_sd22_2 167 188 - -
Aev09g2250 1207 SMART LRR_sd22_2 658 673 - -
Aev09g2250 1207 SMART LRR_sd22_2 730 753 - -
Aev09g2250 1207 SMART LRR_sd22_2 264 290 - -
Aev09g2250 1207 SMART LRR_sd22_2 95 114 - -
Aev09g2250 1207 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1082 1207 - -
Aev09g2250 1207 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 927 1080 - -
Aev09g2250 1207 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 429 763 - -
Aev09g2250 1207 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 429 763 - -
Aev09g2250 1207 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 782 837 - -
Aev09g2250 1207 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 340 427 - -
Aev09g2250 1207 ProSiteProfiles Protein kinase domain profile. 997 1207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev09g2250 1207 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 95 327 - -
Aev09g2250 1207 Gene3D Transferase(Phosphotransferase) domain 1 1073 1207 - -
Aev09g2250 1207 ProSiteProfiles Leucine-rich repeat profile. 266 288 IPR001611 GO:0005515
Aev09g2250 1207 Gene3D Phosphorylase Kinase; domain 1 959 1072 - -
Aev09g2250 1207 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1082 1207 - -
Aev09g2250 1207 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 927 1080 - -
Aev09g2250 1207 Pfam Leucine Rich Repeat 660 679 IPR001611 GO:0005515
Aev09g2250 1207 Pfam Leucine Rich Repeat 733 752 IPR001611 GO:0005515
Aev09g2250 1207 ProSitePatterns Protein kinases ATP-binding region signature. 1003 1026 IPR017441 GO:0005524
Aev09g2250 1207 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 836 871 - -
Aev09g2250 1207 PRINTS Leucine-rich repeat signature 852 865 - -
Aev09g2250 1207 PRINTS Leucine-rich repeat signature 733 746 - -
Aev09g2250 1207 SUPERFAMILY RNI-like 75 397 - -
Aev09g2250 1207 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
Aev09g2250 1207 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 95 327 - -
Aev09g2250 1207 SUPERFAMILY Protein kinase-like (PK-like) 983 1204 IPR011009 -
Aev09g2250 1207 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 836 871 - -
Aev09g2250 1207 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 782 837 - -
Aev09g2250 1207 SMART LRR_typ_2 706 729 IPR003591 -
Aev09g2250 1207 SMART LRR_typ_2 658 682 IPR003591 -
Aev09g2250 1207 SMART LRR_typ_2 264 286 IPR003591 -
Aev09g2250 1207 SMART LRR_typ_2 804 828 IPR003591 -
Aev09g2250 1207 SMART LRR_typ_2 730 754 IPR003591 -
Aev09g2250 1207 SMART LRR_typ_2 143 166 IPR003591 -
Aev09g2250 1207 SMART LRR_typ_2 167 191 IPR003591 -
Aev09g2250 1207 SMART LRR_typ_2 551 574 IPR003591 -
Aev09g2250 1207 SMART LRR_typ_2 288 312 IPR003591 -
Aev09g2250 1207 SMART LRR_typ_2 478 502 IPR003591 -
Aev09g2250 1207 SMART LRR_typ_2 526 550 IPR003591 -
Aev09g2250 1207 SMART LRR_typ_2 852 877 IPR003591 -
Aev09g2250 1207 SMART LRR_typ_2 610 634 IPR003591 -
Aev09g2250 1207 SMART LRR_typ_2 95 119 IPR003591 -
Aev09g2250 1207 Gene3D Ribonuclease Inhibitor 599 901 IPR032675 -
Aev09g2250 1207 Gene3D Ribonuclease Inhibitor 339 598 IPR032675 -
Aev09g2250 1207 Gene3D Ribonuclease Inhibitor 190 338 IPR032675 -
Aev09g2250 1207 SUPERFAMILY L domain-like 342 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2250 Aev-Chr9 25076628 25080455 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2250 1080 1204 Receptor kinase-like Gene Family AT5G07280 67.200 1.34e-47 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Aev09g2250 PK_Tyr_Ser-Thr 2.4e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2250 - - aip:107618864 1769.98