Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aev09g2241 | ATGCCTAAGCGCAAGGTATCAAACTCCAGTGTAACAAATAAATTCAACAACAGTTTAAATGATAGGAATGAAAAATCAGAGGAGGAATTAGGCATGAAGAAATTGAAGAAACACGTTCTTCAGGGTCCTTCAGATGGGGTTGATGACTCAAGAGATCAGTCTGAAGACCTCCTAGAAGAAGATCCAGAGGAGGAATCATGTGAGGAGCAAGAGGAAGATCCAGAGGAGGAATCAGGTGAGGAACTAGAGGAAGATCCGGAAGAAGAATCAGGTGAGGAACTAGAAGACGGTCTAGAGGAGGGATCAGGTGAGGAGCTAGAGGAAGATCCAGTGGAGGAATCAGGTGAGGAACTAGAGAAAGAAGAGAGAGATCCAGAGGAGGAATCAGGTGAGGAAGTGGATGAAGATCCAGAGGAGGAATCAGTTGAGGAACTGGAGGAAGATCCAGAGGAGGAATCAGTTGAGGAACTGAAGGAAGATCTAGAGGAGGCATCAGGTGAGAAACTAGAGAAAGATCCAAAGGAGAAATCAGATGAGGAACTAGAGGAAGATCCGGAGGAGGAATCGGGTGAAGAATTGGAGGAAGATCAAGAGGAGGAATCAGGTGAGGAACGAGAAGAAGATCTAGAGGAGGTATCAGGTGAGGAGCAAGAAGAAGAGCTAGGGAAGGAATCAGGTGAGGAACAAGAAGAAGAGCTAGAGGAGGAATCAGAATCGGGTGAGGAATTGGAGGAAGATCAAGAGAAGGAATCAGGTGAGGAACAAGAAGAAGATCTAGAGGAGGTATTAGGTGAGGAACAACAAGAAGAGCTAGAGGAGGAATCAGGTGAGGAACAAGAAGAAGAGCTACAGGAGGAATCAGGACAGGAACTAGAGGAAGATCCTAAAGATGATCCAGAAATAAATAACAAACAAGGGAATCCATCAGGTAATGAAGTTCCACTATTCTCTCAGGCACCATTATATCAATCACAAAAGAAGTACATACAGGAGGGAATGCGAAGCCAAGAGTCAGTATCAAAACCTTTAAGTCTGGAGCTCAGTAATGACACAGTGGTTTCTGCAGCACCTACTGATAAATCTGGATCTAAATTAAGTGCAGGAAGTTCTGGAAAACGAAGGCGCAGCAGATGGGAACCACAGCCTGATGGAGATGGAATGAAAAAAGATGATAGAACGTCCAAAAGGTGGACAACCAGGTGGTCTAGTGAAGAAATTCAAATGAAAATGATGGGCCCACTTCGAGCGCCTGACTTCACGGAGAATTTTGCCATTGGATCAAATAAGGAACCACAAATTTGGGGACTGAAATCTGAGCTATTGGAGATTAACATAAAGTTGCAAAGTTCTATTATTGATGATAGGCCTGAGGAGGAAAGGTCTCCTTCTCCTAATCCAGTTTATGATAACCTTGGCATCAGATTAAATACAAGAGACGTAAGAATACGTCGTAGACTTACTCAGAAACGTCAAAATATCATATCAAAGTTGATCAAATTAGACCCAACTTTTAACCCTCCTCCTGATTTTAGGCCCCAAAAGTTCGTTAAAAAAGTTTACATACCAGTTAAGGAATATCCGGAATACAATTTTATTGGACTTATAATTGGTCCTCGTGGAAACACACAGAAGAGGATGGAAAAGGAAACTGGGGCAAAGATTCTTTTAAGAGGTAAAGGCTCGTTAAAAACACCCAGCAAAAATGACTCTGAAGAAGATGATTTACATGTTCAAATAGAAGCAAAGGACCCAGAATCACTGGATGCAGCAGTTACCATGGTTGAGAAACTGCTAGTTCCAATTGAAGAAGGAAGAAATGAGCACAAGCGTGCACAATTAAGGGAGCTGGCTGAGCTGAGTGCAACTCAGAGAGATGAAAATGTCTGCAGTGTATGTGGTGATCAGGGACACAGACATTATGCATGCCCTAACCTTCAATCAACTTTCAAAATGGATTCATTTGACACTGGTTGTAGCAATACCCTTTCAACACCTACCTTCCCTGTGACTGCATTGTTCCCACACAGTTCTTCTTTAACGGGCTCTGGATTAAGTCTCAGTTCAATGCAGAACAGACAAACAAAGCCTGGAAAAGAAATCAGTGACAAAAATCTTTATGTTGGCTATCTACCGCAATCAGTTGATGATCATAGATTGAGTGAGCTGTTTTCTCCATTCGGTAAGATCACTGAAGCAAAAGTTGTGAAGGATCGGTCCACCGGAATCAGTAAAGGTTACGGCTTTGTCAAATTTGAAGATTCAAAGGAAGCAGCATTAGCTATAGCACATTTAAACGGTTTCAAAATTGATGGAAAGCTTTTGAAAGTGCGGATAGCAGGTCTCCAGCCAAATAATGAAATCCCACGCCTGAACCCGATTCCGCTGATCCCGGGGCATGCAGCTCTATCAACAAATATCACAAACCAAACTGATCTACCTGGTCCATTACATTTCATGCTGCCAGAACATCAATCTTCATTTGATGGCAGCAGTAGCACAAATATGTTTTCTTGTTCTGTCAACTCAGAGCATGGTAATCCTATGAAGGCAAAGGCTCTAGCCTTTACTCCTCCGGGAAACAATTTGATCTCTCCTCATTTTGGTTATTCTTCTGGCAATATGCAATTTTCAGGCAATTTTTCAGATCAAAGTTTGTTCTCATCAAATAATTCAACTGCACAGTTTCCTGGTGACCCAGGCAATCATGGTAATTTCAATCCTTTTTTATGA | 2730 | 0.4223 | MPKRKVSNSSVTNKFNNSLNDRNEKSEEELGMKKLKKHVLQGPSDGVDDSRDQSEDLLEEDPEEESCEEQEEDPEEESGEELEEDPEEESGEELEDGLEEGSGEELEEDPVEESGEELEKEERDPEEESGEEVDEDPEEESVEELEEDPEEESVEELKEDLEEASGEKLEKDPKEKSDEELEEDPEEESGEELEEDQEEESGEEREEDLEEVSGEEQEEELGKESGEEQEEELEEESESGEELEEDQEKESGEEQEEDLEEVLGEEQQEELEEESGEEQEEELQEESGQELEEDPKDDPEINNKQGNPSGNEVPLFSQAPLYQSQKKYIQEGMRSQESVSKPLSLELSNDTVVSAAPTDKSGSKLSAGSSGKRRRSRWEPQPDGDGMKKDDRTSKRWTTRWSSEEIQMKMMGPLRAPDFTENFAIGSNKEPQIWGLKSELLEINIKLQSSIIDDRPEEERSPSPNPVYDNLGIRLNTRDVRIRRRLTQKRQNIISKLIKLDPTFNPPPDFRPQKFVKKVYIPVKEYPEYNFIGLIIGPRGNTQKRMEKETGAKILLRGKGSLKTPSKNDSEEDDLHVQIEAKDPESLDAAVTMVEKLLVPIEEGRNEHKRAQLRELAELSATQRDENVCSVCGDQGHRHYACPNLQSTFKMDSFDTGCSNTLSTPTFPVTALFPHSSSLTGSGLSLSSMQNRQTKPGKEISDKNLYVGYLPQSVDDHRLSELFSPFGKITEAKVVKDRSTGISKGYGFVKFEDSKEAALAIAHLNGFKIDGKLLKVRIAGLQPNNEIPRLNPIPLIPGHAALSTNITNQTDLPGPLHFMLPEHQSSFDGSSSTNMFSCSVNSEHGNPMKAKALAFTPPGNNLISPHFGYSSGNMQFSGNFSDQSLFSSNNSTAQFPGDPGNHGNFNPFL* | 910 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aev09g2241 | 909 | MobiDBLite | consensus disorder prediction | 20 | 51 | - | - | |
Aev09g2241 | 909 | Gene3D | K Homology domain, type 1 | 507 | 631 | IPR036612 | GO:0003723 | |
Aev09g2241 | 909 | SMART | rrm2_1 | 704 | 777 | IPR003954 | GO:0003676 | |
Aev09g2241 | 909 | MobiDBLite | consensus disorder prediction | 161 | 178 | - | - | |
Aev09g2241 | 909 | PANTHER | SPLICING FACTOR-LIKE PROTEIN 1 | 335 | 660 | - | - | |
Aev09g2241 | 909 | PANTHER | RNA-BINDING PROTEIN RELATED | 697 | 816 | IPR045071 | - | |
Aev09g2241 | 909 | PANTHER | RNA-BINDING PROTEIN RELATED | 335 | 660 | IPR045071 | - | |
Aev09g2241 | 909 | MobiDBLite | consensus disorder prediction | 179 | 296 | - | - | |
Aev09g2241 | 909 | PANTHER | SPLICING FACTOR-LIKE PROTEIN 1 | 697 | 816 | - | - | |
Aev09g2241 | 909 | MobiDBLite | consensus disorder prediction | 52 | 160 | - | - | |
Aev09g2241 | 909 | MobiDBLite | consensus disorder prediction | 887 | 909 | - | - | |
Aev09g2241 | 909 | MobiDBLite | consensus disorder prediction | 302 | 319 | - | - | |
Aev09g2241 | 909 | SMART | kh_6 | 513 | 599 | IPR004087 | GO:0003676 | |
Aev09g2241 | 909 | Pfam | KH domain | 530 | 595 | IPR004088 | GO:0003723 | |
Aev09g2241 | 909 | Gene3D | - | 678 | 786 | IPR012677 | - | |
Aev09g2241 | 909 | Gene3D | - | 428 | 506 | - | - | |
Aev09g2241 | 909 | MobiDBLite | consensus disorder prediction | 350 | 369 | - | - | |
Aev09g2241 | 909 | MobiDBLite | consensus disorder prediction | 372 | 399 | - | - | |
Aev09g2241 | 909 | CDD | SF1_like-KH | 517 | 624 | - | - | |
Aev09g2241 | 909 | ProSiteProfiles | Type-1 KH domain profile. | 530 | 594 | - | - | |
Aev09g2241 | 909 | Coils | Coil | 216 | 286 | - | - | |
Aev09g2241 | 909 | SUPERFAMILY | RNA-binding domain, RBD | 691 | 779 | IPR035979 | GO:0003676 | |
Aev09g2241 | 909 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
Aev09g2241 | 909 | MobiDBLite | consensus disorder prediction | 324 | 343 | - | - | |
Aev09g2241 | 909 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 705 | 774 | IPR000504 | GO:0003723 | |
Aev09g2241 | 909 | SUPERFAMILY | Eukaryotic type KH-domain (KH-domain type I) | 515 | 631 | IPR036612 | GO:0003723 | |
Aev09g2241 | 909 | MobiDBLite | consensus disorder prediction | 1 | 319 | - | - | |
Aev09g2241 | 909 | Pfam | Splicing factor 1 helix-hairpin domain | 399 | 511 | IPR032570 | - | |
Aev09g2241 | 909 | MobiDBLite | consensus disorder prediction | 350 | 399 | - | - | |
Aev09g2241 | 909 | SMART | rrm1_1 | 704 | 777 | IPR000504 | GO:0003723 | |
Aev09g2241 | 909 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 703 | 781 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aev09g2241 | Aev-Chr9 | 25040285 | 25043014 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aev09g2241 | 628 | 784 | Eukaryotic Initiation Factors Gene Family | AT3G11400 | 31.707 | 4.52e-13 | 69.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aev09g2241 | K13095 | - | csin:114293476 | 534.643 |