Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2238 ATGAGGTGCCAGACATTAGAAAAGGCAAAACCAAAACACAAGAAGGGGTTATGGTCACCTGAAGAAGACAATAAGCTAAGAAACTACATTCTTAAGCATGGTCATGGTTGCTGGAGCTCTGTCCCTATCAAGGCAGGGTTACAAAGGAATGGAAAAAGTTGCAGACTAAGGTGGATTAATTATCTAAGGCCAGGATTAAAGAGAGGAATGTTCAGCAAACAAGAGGAAGAGACAATCCTCTCCCTTCACCAGATGTTAGGCAACAAGTGGTCTCAGATAGCACAAAATTTGCCAGGAAGAACAGATAATGAGATAAAAAACTTTTGGCATTCATATTTGAAAAAGAGAGTGGGCAAATCTAAGGAAATGGAATCTCACAAACAAGTTCAGTATGCTAGCTCAAGCTCAGATACATTGGAATCATCACACTCTCTCCAAAACCTTGCAATAACTCAAGGCACACAGAATTATAACTTCACCAATGAATCTTATCCAAGCAACTTACCAAAGCTGTTATTTGCTGAGTGGCTTTCACTGGATCATCATGTGAATGGTGGTAACTCTGCAAATTCATATGACTCTTTGGCCTTAAAGAATGGATTTGATCAAAACTCAACTTTTCAAGAAGCTGCAATGCATGATATACCAGAAGGACCCTTTGGTGGAGAGTATCACAATAGCCTAGCTCAAAATTCAGCCACAGATATGTTCAATTCACAGCTTAAGTTTGGAAACCAAATTGAGGGAAATGGATTCATCCATTGCATACCTGAGGTTGATTTAAGTAGCAATTTCAGCCTCAGCACTGATGCAATGTATGTATGA 825 0.3939 MRCQTLEKAKPKHKKGLWSPEEDNKLRNYILKHGHGCWSSVPIKAGLQRNGKSCRLRWINYLRPGLKRGMFSKQEEETILSLHQMLGNKWSQIAQNLPGRTDNEIKNFWHSYLKKRVGKSKEMESHKQVQYASSSSDTLESSHSLQNLAITQGTQNYNFTNESYPSNLPKLLFAEWLSLDHHVNGGNSANSYDSLALKNGFDQNSTFQEAAMHDIPEGPFGGEYHNSLAQNSATDMFNSQLKFGNQIEGNGFIHCIPEVDLSSNFSLSTDAMYV* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2238 274 CDD SANT 18 62 IPR001005 -
Aev09g2238 274 CDD SANT 71 113 IPR001005 -
Aev09g2238 274 Gene3D - 15 67 - -
Aev09g2238 274 PANTHER MYB TRANSCRIPTION FACTOR 154 268 - -
Aev09g2238 274 PANTHER MYB DOMAIN PROTEIN 55 1 151 - -
Aev09g2238 274 SMART sant 14 64 IPR001005 -
Aev09g2238 274 SMART sant 67 115 IPR001005 -
Aev09g2238 274 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Aev09g2238 274 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Aev09g2238 274 PANTHER MYB TRANSCRIPTION FACTOR 1 151 - -
Aev09g2238 274 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Aev09g2238 274 Gene3D - 70 140 - -
Aev09g2238 274 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Aev09g2238 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 66 IPR017930 -
Aev09g2238 274 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Aev09g2238 274 PANTHER MYB DOMAIN PROTEIN 55 154 268 - -
Aev09g2238 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2238 Aev-Chr9 25023136 25025179 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2238 8 250 MYB Transcription Factor Family AT3G48920 46.586 2.56e-64 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev09g2238 Myb_DNA-binding 2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2238 K09422 - gmx:778167 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2238 09 25023136 25025179 Aev09g2238 09 25023136 25025179 ECH