Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2237 ATGGGTAAAGCACCGTGTTGTGATAAGCATGGAGTCAAGAGAGGAGCTTGGACTCCTGAAGAAGATGAAGCTTTGCTTCATTATATCACCAAGAACGGCCATGGAAGTTGGCGCTCACTCCCCAAGCATGCAGGTCTGCTAAGATGTGGTAAAAGTTGTAGGCTGCGGTGGATAAATTATCTAAGGCCTGACATCAAGCGTGGCCCATTTACTGCTGAGGAGGAAAGTACTATTATTCAACTTCATGCCATGCTTGGCAATAGGTGGGCTGCTATAGCAACCCAACTACCGGGAAGAACAGATAATGAGATCAAGAACTATTGGAACACTCATCTAAAGAAGCGTGTTCATCGGTCAGAGAATGCCTCCGGGGAGGCTAAACAGCCGTCTCCAAGCCCTGATCTGAGTATGGTAAATTCTGAATCTCCTTCGACGCGACACATGGTGCAATGGGAAAGCGCTAGAGTCGAGGCGGAGGCAAGGTTGTCAATGGAATCCTCATTGCTTAATCCGTGGTCGCCGGACAAAACATGCTCAGATTACTTTCTTAGACTATGGCACTCTGAGGTTGGACAGTCATTTCGTGTGATCAAGGGAAAGGAAAGGGTAGAGACTCAAAGCCTTGTCTCAAAGGAATCAACACCATCATCATCATCAATGAAATTGGAGTCATGTTCAGATGCTTCATTGCAGATGAAAAACATTGGAACCAGTAGTGCCTCTCCTCCCAACATTGTTCAAGAAAGTAGCTACAAACCAACGGTTGAGGATGACACAGGTGGATCAGATTCTGGGAATTATGAGTTCCTTGATACTTCTGATTATGCACTAAAGCACCTGCTGGATATGCCTGATGGTGATATTGGATTCTTGGAACAGACTGAAAGTTTCCTCAACCACCTTGATGGTAGATTTGACTAA 921 0.4549 MGKAPCCDKHGVKRGAWTPEEDEALLHYITKNGHGSWRSLPKHAGLLRCGKSCRLRWINYLRPDIKRGPFTAEEESTIIQLHAMLGNRWAAIATQLPGRTDNEIKNYWNTHLKKRVHRSENASGEAKQPSPSPDLSMVNSESPSTRHMVQWESARVEAEARLSMESSLLNPWSPDKTCSDYFLRLWHSEVGQSFRVIKGKERVETQSLVSKESTPSSSSMKLESCSDASLQMKNIGTSSASPPNIVQESSYKPTVEDDTGGSDSGNYEFLDTSDYALKHLLDMPDGDIGFLEQTESFLNHLDGRFD* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2237 306 SMART sant 13 63 IPR001005 -
Aev09g2237 306 SMART sant 66 114 IPR001005 -
Aev09g2237 306 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Aev09g2237 306 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aev09g2237 306 CDD SANT 69 112 IPR001005 -
Aev09g2237 306 Gene3D - 14 66 - -
Aev09g2237 306 MobiDBLite consensus disorder prediction 204 266 - -
Aev09g2237 306 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Aev09g2237 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Aev09g2237 306 PANTHER MYB TRANSCRIPTION FACTOR MIXTA-LIKE PROTEIN 1 295 - -
Aev09g2237 306 CDD SANT 16 61 IPR001005 -
Aev09g2237 306 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aev09g2237 306 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 295 - -
Aev09g2237 306 MobiDBLite consensus disorder prediction 123 149 - -
Aev09g2237 306 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aev09g2237 306 MobiDBLite consensus disorder prediction 208 266 - -
Aev09g2237 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Aev09g2237 306 MobiDBLite consensus disorder prediction 117 150 - -
Aev09g2237 306 Gene3D - 69 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2237 Aev-Chr9 25014978 25016885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2237 1 293 MYB Transcription Factor Family AT3G61250 53.667 2.79e-99 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev09g2237 Myb_DNA-binding 3.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2237 K09422 - gmx:100782075 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2932 05 30115274 30117887 Aev09g2237 09 25014978 25016885 ECH
Aev09g2237 09 25014978 25016885 Aev09g2237 09 25014978 25016885 ECH