Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2217 ATGTCAGAATCTGAGGAAGATAATAACACAGACTCTGTTCCAAAGTCAGAGGCACCTCCAGTTGTTGGTTGTGCCATGGATTTCGATCTGGACTTGGAGAGTTCATGGCCGTTGGATCACTTGTCCTTTGTGTCAAATCCCATGTCTCCTTTCATGTTCTCCATCTCCTCTGACCTACCTTCTTCTCCTCTTTGGGCCTTCTCTGATGCAGAAGATGACAGATTCAACAGGGTTCCTGCCACTTCAGCTTTCTCTGACTGCCACAAGATTTTCTCTTGTGATTCGAATTCAATAGCTGAAAAGGCAGTGGAGAATGATGACAACAGGAAAATTCTGCCACCACTTATGGCTCCGCCACCAGTAGAGATTTTGGATAGCTATTGTGTAATCAAGGAAAGGATGACACAGGCGCTTCGCTACTTCAAAGAGTTGACTGAACAGAATGTCTTGGCTCAGGTTTGGGCGCCGGTGAGAAACGGTAATCGGTATATGCTTACAACATCAGGCCAACCTTTTGTTCTTGATCCGCATAGTAATGGCCTCCATCAGTATAGAACGGTATCCCTGATGTACATGTTCCCTGTGGATGGAGAGCATGAAGGATCCCTGGGACTTCCTGGTAGAGTTTTTCAGCAGAAGTTACCGGAATGGACTCCTGATGTTCAGTACTATTCTAGTAAGGAGTATCCGCGAAGAGATCATGCTCAGCATTACAATGTTCGCGGCTCCTTGGCTCTGCCTGTTTTTGAGCCTTCATTGCAGTCTTGTGTCGGTGTGCTCGAGTTAATCATGACCTCACAGAAGATTAACTATGCTCCTGAGGTTGATAAAATCTGCAAAGCTCTTAAGGCAGTGAATTTGAAGAGTTCAGAAATTTTGGACCATCAATACACTCAGATTTGTAACGAAGGCCGCCAAAACGCGTTAGCAGAGATATTGGAGATATTGACAGTGGTGTGTGAAACTCACAATTTACCTCTAGCTCAAACATGGGTTCCCTGTAGGCATAGGAGTGTTCTGGCTCATGGTGGTGGCATAAAGAAAAGTTGTTCTAGTTTTGATGGTAGTTGCATGGGGCAAGTTTGCATGTCTACAACTGACATAGCATTCTATATCATTGATGCTCATTTATGGGGTTTTCGCGAGGCTTGCGTTGAGCATCACTTGCAACAAGGTCAAGGTGTTGCTGGGAGGGCCTTTTTGTCACACAGTTTGTGCTTCTGTGGGAACATTACTCAATTCTGCAAAACTGATTATCCCTTAGTTCATTATGCTCTCATGTTTGGGTTAACAAGCTCTTTTACAATCTGTTTGCGAAGCTCGCATACCGGAGATGATGATTATGTATTAGAGTTTTTTCTACCTCCTAGGATCACTGACTTACATGAGCAACATGCTTTGTTAGGATCTATATTGGCTACAATGAAGCAGCATTTCCAGAGCCTTAAGATTGCTGCTGGTTTTGAACTTGGGGAGGATGTGTCAATTGAAATTATTGAAGTGACAAATGAAAGAGTTCATCTGAGTCTTGAATCAATTCCTATTGCACGATTTACTCGATCACCGCCTGGACCTGATGCCTCACCAAATATGGGGGAGGAAGTGCAGCAGCATCCATCAGAACCCAAAATAATGATGTACTGTAATGACATAAATCATGGAGGAGGGAGTCCTGGCGATAATGCAGGTGGAGGAAGCCTTGAACATGTGTCCACTTTAGAGCCTAAAAACACGAAGAAACCCCTCGAGAGGAAACGTGGGAAAACTGAGAAAATGATTAGTCTTGAAGTTCTGCAACGTTATTTTGCTGGGAGTCTTAAAGATGCTGCAAAGAGCCTTGGTGTTTGCCCTACTACAATGAAGCGAATCTGCAGGCAGCATGGGATATCCCGTTGGCCATCTCGAAAGATCAACAAGGTTAATCGTTCTCTGTCGAAGCTCAAGCGTGTTATAGAATCCGTGCAAGGTGCTGAAGGAGCTTTTGGTTTGAATCCTCTAACCTCAAGTCCTCTTCCCATTCCTGCCGGTTCCTTTCCTGAGCCTACTACTCCAAACAAGCTCAATCCACAATCCTCATTGTGCATTATGCCATCAGAACCTCACATGAAAGAAAATGAACTTGATGCCTCTAAAGAATCGGAAACAAACCGAGAAGCCGTGATGGAAGATCAATTGCTAGAAGGAAGGACTCAGAGTCCTGATAAAGTGACTAATGATAAAGGCGGATGTACTCATGTGGTTGGAAAAGAACCAAGAAGGACTAGAACCGGTAGTGGCTCGAGTGCAGATAGCACGAATCCAACTTCTCATGGATCATGCCATGGTAGTCCCCCAATTGAAAGCTCTCCTGTGAAAGATATATTTGTTACATCCAACAATGAGCAATGTGTAGTGCTAAGATCACCGGAATCGATGCTGCAGCCGAATAATACACTGATGAACTGTCCAACTGGCTACACTATGCCTGATATTGGGGTAACAGAACTTCAAGAGCCATTTGGAGGAATGCTAATAGAAGATGCAGGCAGTTCCAAAGACTTGAGAAACTTGTGTCCTTCTGTAGCAGAGGCCATTTTGGAGGACCTGGCTCCGGAACCATGTGGGACTAATCCTCCATGTTCTGACTTGGCTCCTAAGCAATGCATGGATACTACTACCCTTAAGAACACAGGTACACCTTTTGCAGCAAGGAAAGAAATGAAGACTGTGACCATTAAGGCAACATACAGAGAAGATATCATAAGGTTTCGTGTCACATTGAATTGTAGTATTGTGGAGTTGAAAGAAGAAGTTTCCAAGAGGTTGAAACTAGAAGTTGGTACATTTGATATAAAGTACTTGGATGATGATCATGAATGGGTTTTGATAGCATGTGATGCAGATCTTCAGGAGTGCATAGATGTTTCAAGGTCATCAGGGAGTAACATAATCAGGGTTTTGGTGCATGACATTACTTCCAATCTTGGAAGCTCCTGTGAAAGCTCAGGGGAGTGA 2994 0.4392 MSESEEDNNTDSVPKSEAPPVVGCAMDFDLDLESSWPLDHLSFVSNPMSPFMFSISSDLPSSPLWAFSDAEDDRFNRVPATSAFSDCHKIFSCDSNSIAEKAVENDDNRKILPPLMAPPPVEILDSYCVIKERMTQALRYFKELTEQNVLAQVWAPVRNGNRYMLTTSGQPFVLDPHSNGLHQYRTVSLMYMFPVDGEHEGSLGLPGRVFQQKLPEWTPDVQYYSSKEYPRRDHAQHYNVRGSLALPVFEPSLQSCVGVLELIMTSQKINYAPEVDKICKALKAVNLKSSEILDHQYTQICNEGRQNALAEILEILTVVCETHNLPLAQTWVPCRHRSVLAHGGGIKKSCSSFDGSCMGQVCMSTTDIAFYIIDAHLWGFREACVEHHLQQGQGVAGRAFLSHSLCFCGNITQFCKTDYPLVHYALMFGLTSSFTICLRSSHTGDDDYVLEFFLPPRITDLHEQHALLGSILATMKQHFQSLKIAAGFELGEDVSIEIIEVTNERVHLSLESIPIARFTRSPPGPDASPNMGEEVQQHPSEPKIMMYCNDINHGGGSPGDNAGGGSLEHVSTLEPKNTKKPLERKRGKTEKMISLEVLQRYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKVNRSLSKLKRVIESVQGAEGAFGLNPLTSSPLPIPAGSFPEPTTPNKLNPQSSLCIMPSEPHMKENELDASKESETNREAVMEDQLLEGRTQSPDKVTNDKGGCTHVVGKEPRRTRTGSGSSADSTNPTSHGSCHGSPPIESSPVKDIFVTSNNEQCVVLRSPESMLQPNNTLMNCPTGYTMPDIGVTELQEPFGGMLIEDAGSSKDLRNLCPSVAEAILEDLAPEPCGTNPPCSDLAPKQCMDTTTLKNTGTPFAARKEMKTVTIKATYREDIIRFRVTLNCSIVELKEEVSKRLKLEVGTFDIKYLDDDHEWVLIACDADLQECIDVSRSSGSNIIRVLVHDITSNLGSSCESSGE* 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2217 997 MobiDBLite consensus disorder prediction 549 586 - -
Aev09g2217 997 CDD PB1_NLP 903 983 IPR034891 -
Aev09g2217 997 PANTHER PLANT REGULATOR RWP-RK FAMILY PROTEIN 5 996 - -
Aev09g2217 997 MobiDBLite consensus disorder prediction 1 20 - -
Aev09g2217 997 MobiDBLite consensus disorder prediction 754 776 - -
Aev09g2217 997 MobiDBLite consensus disorder prediction 681 695 - -
Aev09g2217 997 Pfam RWP-RK domain 593 640 IPR003035 -
Aev09g2217 997 PANTHER PROTEIN NLP8 5 996 IPR045012 GO:0003700
Aev09g2217 997 MobiDBLite consensus disorder prediction 672 784 - -
Aev09g2217 997 SMART PB1_new 902 984 IPR000270 GO:0005515
Aev09g2217 997 Pfam PB1 domain 902 983 IPR000270 GO:0005515
Aev09g2217 997 ProSiteProfiles RWP-RK domain profile. 579 660 IPR003035 -
Aev09g2217 997 SUPERFAMILY CAD & PB1 domains 900 987 - -
Aev09g2217 997 Gene3D - 899 983 - -
Aev09g2217 997 MobiDBLite consensus disorder prediction 701 724 - -
Aev09g2217 997 ProSiteProfiles PB1 domain profile. 902 984 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2217 Aev-Chr9 24871521 24875586 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2217 886 997 NLP Transcription Factor Family AT1G64530 55.752 2.54e-30 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Aev09g2217 PB1 1.2e-19 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2217 - - gmx:100786118 1605.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2906 05 29852840 29856780 Aev09g2217 09 24871521 24875586 PCT