Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2216 ATGGCTCCTAAACCCCCTAGTACGGGTCTGTTCGTTGGGTTGAACAAGGGTCACATCGTCACCAAGAAGGAATTGCCGCCACGCCCCTCAGATCGCAAAGGGAAAACAAGCAAGAGGGTGCACTTTGTTAGGAACCTCATCCGTGAGGTTGCTGGTTTCGCCCCTTATGAGAAGCGTATCACTGAGCTGCTCAAGGTTGGGAAAGATAAGAGGGCACTGAAAGTTGCAAAGAGAAAGCTTGGAACCCACAAGCGTGCAAAGAAGAAGCGTGAGGAGATGTCCAATGTTCTCCGCAAGATGAGGTCTGGTGGAGGTGGTGATAAGAAGAAATAA 333 0.5015 MAPKPPSTGLFVGLNKGHIVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRSGGGGDKKK* 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2216 110 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Aev09g2216 110 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 1 110 - -
Aev09g2216 110 MobiDBLite consensus disorder prediction 87 110 - -
Aev09g2216 110 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Aev09g2216 110 MobiDBLite consensus disorder prediction 1 37 - -
Aev09g2216 110 MobiDBLite consensus disorder prediction 79 110 - -
Aev09g2216 110 PANTHER 60S RIBOSOMAL PROTEIN L36 1 110 IPR000509 GO:0003735|GO:0005840|GO:0006412
Aev09g2216 110 Gene3D 60S ribosomal protein L36 2 105 IPR038097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2216 Aev-Chr9 24865477 24866328 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2216 7 110 Cytoplasmic Ribosomal Protein Gene Family AT5G02450 83.654 2.17e-58 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2216 K02920 - gmx:100785591 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2903 05 29837213 29838179 Aev09g2216 09 24865477 24866328 ECH
Aev09g2216 09 24865477 24866328 Aev09g2216 09 24865477 24866328 ECH