Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2213 ATGGGTAGCATCCAAGTAGCTGCAGCTGAAGAGCGAGTGCAGGAGGAAGAAACAGAGACAGTGTTTGTCGCTGTGGGCAAGAACATCGATAAGACTCAAAAACTGTTGCATTGGGCATCCCAGAATTTCCCATCCAAACAAATTTGCGTCCTTCATGTTCACCAACCCACAGACAGAAACCCTTCTGGGGGAGAACCGAGAAATCTTGCAATCAATGCATTCCAAGATGATGGAAGTCAAAAAGTGCATGAAATCCTTGACAAATATGTTGCCACTCTTGCCCTAGCAGGGGTACGAGCTGGTAAACTGTTGATTGAGATGGACAATATTGAGAAAGGGATCGTGGAAGCTATTGAGAAACACAATATTAGATGGCTTGTGATAGGAGCTGCTGCAGATGCATATAACTTGGGTAAACTGGCCAAGCAAGAGTCAGAGGAAAGTATCCTTGTCCATAAACAATCATTTCCATCCTGTAATATTTGGTTCCTTTGCAACGGCAACGTCATATGTACCAGGGTAGACAGTAAACATGCATCTGAAATAGAGACTGCCCCTCCATTGTTGGTGCTCAATTCAAGTACAGAAGCCAAACAATCAGAGAAGTTCAAATCTGAATCAATGCCTAAGGCATTGAAATGTTTAGATTCTGATGATACGGAAGAAATTGAAAATTTCAGTTCCAACTCTTCATTACATTCAAAATGGTCCCTCGATAGTGTTGACAGTTCGAAGTTGACAGATTTTCTGTCTCATGAGGAGGAGGAAAATGGAAGGGAGGGAGCAAGTGAAATAAATGTTAGACTTGAGAAAATCATGAGAGATTCTAAGATTGTCAAACGAAAAGAATTTGGAGAGGCATTAAAGCAATGGAAAGTGGAGAAAAGTACTATGGAGGATGAAGCATTAGAACGCCAGTGTGGTAAGGAGATAAATAGAAGAAAAGAAGTTGAAGAACAATTGGCTAGGGTGAAGGAAGAGATACAGAAAATGAAGAATCAGCAAGATGAAATTATGCATGAATTGCAAACTGTAGAAGACCAAAATTTAACACTCAAGAACCAGCTTTCCGAGTCCCAATGTACAGAGACAGAGTTGGAGGAGAAGATCATATCAGCTGTGAACCTCTTGATAAGCTTCAGGGAAAAACGAGATAAGCTACGGATCGAACATGCAAATGCAGTAAGGCATGTCAAAGTGCTGAAGGAATTTGGAAAAGCACCTACTGCATTCTCTTATGCGGTGGAATTCCCTGTATTTTCTTTTGTGGAGATCAATGAGGCAACTAACGACTTTGACCCATCTTGGAAGATCGGAGAAGGAAGGTTTGGAAGTGTTTACAAAGGACTGCTTCGCAACATCCATGTTGCCATAAAAATGTTGCCCTCATATGGCTGTCATAACCAATCGGAGTTTGAACATCGGGTAGAGGTTTTGAGTAGGGTAAGACATCAAAACCTGTTAACACTGATTGGAAGCTGTGCAGAGTCTAGGTCACTTGTGTATGAATATCTAAACAATGGCAGCCTCGAACGCCACCTTGCCCGTAAAGATAAGACTCCCCTTCCATGGCAAATTCGAATCTCCATTGCTGCTGACATATGCTCTGCTCTAATTTTCCTTCACTCTAGTGAGCCTTGTATTATCCATGGGAATTTGAAACCAAGTAAGGTTCTCCTTGATGCTAACTTCGTCGCAAAACTTGCTGATGTGGGGATTCCTAGCTTAGTCCAGCAAAGGGTGGATTCAACTGGCACAACCACAACACATAACAACCAAAATGAAAGTTTGGCTTATGTGGATCCAGAATATATTGCCACTGGCAAGTTCACACCAGAATCAGATGTGTATTCATTCGGAATCATATTGTTACAACTTCTAACAGGAAGACCAATTTTGGGGCTAGTCAGAGATGTGAAATGTGCACTGGAAAAGGAAAACCTTAAAGCAGTATTGGACTATTCAGCTGGAGAGTGGCCGCTTTATCAGACTAAACAGCTCGCATACGTAGCGTTGAGGTGTTGCGAGAAGACTTGGCTGAACCGGCCAGACCTTGTGTCAGAAATCCGGAGTGTTCTTGAACCTTTCCGAACTACGTGCAACAACACGCCACCATCTTTAACTCCTAAGAAACATCGTCGCACTCCATCCCATTTTGTATGCCCCATTTTGCAGGAAGTAATGGAAGATCCATACATAGCAGCAGATGGGTTTACATATGAAGAAGAGGCAATAAGAGAATGGTTGGATACTGGTCACAACACTTCCCCCATGACAAACCTTCAGCTTGAACACACAAATTTAGTGCCTAATTATGCTCTACATAATGCAATTCTGGAGTGGCAGCAACTACAGTGA 2358 0.4232 MGSIQVAAAEERVQEEETETVFVAVGKNIDKTQKLLHWASQNFPSKQICVLHVHQPTDRNPSGGEPRNLAINAFQDDGSQKVHEILDKYVATLALAGVRAGKLLIEMDNIEKGIVEAIEKHNIRWLVIGAAADAYNLGKLAKQESEESILVHKQSFPSCNIWFLCNGNVICTRVDSKHASEIETAPPLLVLNSSTEAKQSEKFKSESMPKALKCLDSDDTEEIENFSSNSSLHSKWSLDSVDSSKLTDFLSHEEEENGREGASEINVRLEKIMRDSKIVKRKEFGEALKQWKVEKSTMEDEALERQCGKEINRRKEVEEQLARVKEEIQKMKNQQDEIMHELQTVEDQNLTLKNQLSESQCTETELEEKIISAVNLLISFREKRDKLRIEHANAVRHVKVLKEFGKAPTAFSYAVEFPVFSFVEINEATNDFDPSWKIGEGRFGSVYKGLLRNIHVAIKMLPSYGCHNQSEFEHRVEVLSRVRHQNLLTLIGSCAESRSLVYEYLNNGSLERHLARKDKTPLPWQIRISIAADICSALIFLHSSEPCIIHGNLKPSKVLLDANFVAKLADVGIPSLVQQRVDSTGTTTTHNNQNESLAYVDPEYIATGKFTPESDVYSFGIILLQLLTGRPILGLVRDVKCALEKENLKAVLDYSAGEWPLYQTKQLAYVALRCCEKTWLNRPDLVSEIRSVLEPFRTTCNNTPPSLTPKKHRRTPSHFVCPILQEVMEDPYIAADGFTYEEEAIREWLDTGHNTSPMTNLQLEHTNLVPNYALHNAILEWQQLQ* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2213 785 Pfam U-box domain 716 782 IPR003613 GO:0004842|GO:0016567
Aev09g2213 785 Pfam Protein tyrosine and serine/threonine kinase 437 686 IPR001245 GO:0004672|GO:0006468
Aev09g2213 785 SUPERFAMILY Protein kinase-like (PK-like) 410 694 IPR011009 -
Aev09g2213 785 Coils Coil 307 348 - -
Aev09g2213 785 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 21 130 - -
Aev09g2213 785 CDD STK_N 20 167 - -
Aev09g2213 785 ProSitePatterns Protein kinases ATP-binding region signature. 438 459 IPR017441 GO:0005524
Aev09g2213 785 ProSiteProfiles U-box domain profile. 714 785 IPR003613 GO:0004842|GO:0016567
Aev09g2213 785 ProSiteProfiles Protein kinase domain profile. 432 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev09g2213 785 PANTHER OS02G0152300 PROTEIN 15 784 - -
Aev09g2213 785 SUPERFAMILY RING/U-box 714 782 - -
Aev09g2213 785 Gene3D Phosphorylase Kinase; domain 1 407 504 - -
Aev09g2213 785 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 32 15 784 - -
Aev09g2213 785 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 714 785 IPR013083 -
Aev09g2213 785 Gene3D Transferase(Phosphotransferase) domain 1 505 701 - -
Aev09g2213 785 Gene3D HUPs 7 140 IPR014729 -
Aev09g2213 785 CDD RING-Ubox_WDSUB1_like 719 760 - -
Aev09g2213 785 SMART Ubox_2 718 781 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2213 Aev-Chr9 24849493 24854460 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2213 63 782 U-box Gene Family AT3G49060 46.093 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Aev09g2213 PK_Tyr_Ser-Thr 5.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2213 - - gmx:100787938 1068.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2213 09 24849493 24854460 Aev09g2213 09 24849493 24854460 ECH