Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2212 ATGCCAGTTCCAAAACTCACTGCCTCTGGCACTCCCGATGTCATGAAAACAGAAGACAGAAATGATTCTTTAGATACCATAATTAGACAAGCAATTGGAAAGGAACCTTTCCTTTCTTTCCCTAGGACCGGTGACAGCCCTGTACAGTGGATTCAATTACTCCATGCTTTGGATCAGAACGAACTTCCAGGGTGGCCTTTGCTCTCTCCTGTGAAGGTTCAGTTGCAGAAGTGTGACAAATGTTCTCGAGAATTTTGCTCTCCCATTAACTATAGAAGACATATGCGTGTACACCATCGATTGAAAAAGCTTGATAAGGATTCTAAAAAAAACAGGGATCTTTTGGGAGCTTATTGGGATAAGCTCTCTGTAGAAGAGGCAAAGCAAGCTGTGTCATTCGACAATGTGATGCTGGAGGAAGTTCCAGGGTCTTCAATTTTAAAATCTCTGACAACTCTTACTCAAAAGCAAGGATTTTCTTCTCTTCCACAGTATTATCTGAGGGCTGGTTCAGCCCTTCTGGATATTGTTGAATCTAGGCCTTCAAGTTTTCCTATATCTTCCCAAGAGTTGTTCAGTATACTAGATGATTCCAGTGAAAGAACATTCTTATGTGGCACAGCAGTATCAATGCAAAGATATGTCTTTGATGGTGAGGCTGGAAAGACCGGCCTTGAACCAAAAAACCTAGTTGCTTGCACAAGTTTCTTGCTAGAGCAGAAACTGTTGAAGGCGTGGCTTGCTGACAAGGAAGCTGAAGCATTGAGGTGCCAGAAGCAGCTGGTGGAGGAGGAAGAAGCTGCTCAGAAAAGACAAGCTGAGCTTTTGGAGAGGAAACGCCAGAAAAAGCTTAGACAAAAAGAACAGAGAGACAGAGAACGGCTCGAAGATGGAACAGAAATTAAAGAGAACATCGTCAGCACAGTAGAGGCTGCATCATCCGCAGCAGCATCTTTAGATACATTCGGCTTTGAAGCACATAATCCAGATACATTTGCAGATCTTGCTCCTTCACCACATGCAACCTGTCACTTCCCTCACATTAATGAAGGTGTTGATGGCGATACACAGTCAGGGAATGATTGTGACACTGACCAGAATATTGAGCGACAGACATCGCAAGGAAATACTCGCCGCCATGTGATGGTTGCTCGACGGCAAGGGATGCTTAGATCACAATGGGCTGCTGTATCCAATGGTTTACATGCAAGCACAAATTCTCAAACATCAAAGCTTGGTGTCTCTCAGAAATATGGGACCAACCGCGACCAAAGAGCATCTCCTATTGTTAATGGCACTAAAGTATGGAGTCGAAAGCCTAAACCAGAAACTGATGGGATGGTTTCAAAAGCCAGCCTTCTGAAGGAACCTGACAAAGGTCAGAATCATGAAGTTTTGATAGGATCTATATCTGTTACTCTAGGCAATGGGTGCCAATCAGGGGGTAATCTTGTGGCACCTCAACGGGACAGCATGGTAGATAATCTGGCCAAGCAGAATACAGCTCAGGAAAAGCCAGCGAAACCTGATTCTGATTCCTTCCAGAGTGGCAATAATCGGTCAACGGTTAAGCTTTGGAGGCCAGTCGGCCAACATGGAGCCAAAGATCCATTGCCACTTCAAAATGGTGGGACTGAAACTGATGCTGTTAATGGGAAAGTTGGTCAAAATTTGTCGTGTCCAGGAAACTTATGCTCTTCCAGACAAGCTGCTAAAGCCTTTCTTGCACAAAGATGGAAAGAATCTATCTCATCAAACCATGTGAAACTGGTTATTTCATCTGATTCTGAGCCTCCTCCTGAATGCCAAGATTGTGAAATGGAAGCATGTCAATCTCCTAATGTTGAAACACGCATCATTCTTGCAAATGCAGAGATCCGGTTGCTTACAATCTCAGGAGTTACAAAATCCAAAGCCAAAATGAAGCCTCAAAAGGAAATCAAGATAAAGTATATCCCTAAACAAAAAGTAGCTACCTAG 1980 0.4359 MPVPKLTASGTPDVMKTEDRNDSLDTIIRQAIGKEPFLSFPRTGDSPVQWIQLLHALDQNELPGWPLLSPVKVQLQKCDKCSREFCSPINYRRHMRVHHRLKKLDKDSKKNRDLLGAYWDKLSVEEAKQAVSFDNVMLEEVPGSSILKSLTTLTQKQGFSSLPQYYLRAGSALLDIVESRPSSFPISSQELFSILDDSSERTFLCGTAVSMQRYVFDGEAGKTGLEPKNLVACTSFLLEQKLLKAWLADKEAEALRCQKQLVEEEEAAQKRQAELLERKRQKKLRQKEQRDRERLEDGTEIKENIVSTVEAASSAAASLDTFGFEAHNPDTFADLAPSPHATCHFPHINEGVDGDTQSGNDCDTDQNIERQTSQGNTRRHVMVARRQGMLRSQWAAVSNGLHASTNSQTSKLGVSQKYGTNRDQRASPIVNGTKVWSRKPKPETDGMVSKASLLKEPDKGQNHEVLIGSISVTLGNGCQSGGNLVAPQRDSMVDNLAKQNTAQEKPAKPDSDSFQSGNNRSTVKLWRPVGQHGAKDPLPLQNGGTETDAVNGKVGQNLSCPGNLCSSRQAAKAFLAQRWKESISSNHVKLVISSDSEPPPECQDCEMEACQSPNVETRIILANAEIRLLTISGVTKSKAKMKPQKEIKIKYIPKQKVAT* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2212 659 ProSiteProfiles Zinc finger C2H2 type domain profile. 76 103 IPR013087 -
Aev09g2212 659 MobiDBLite consensus disorder prediction 401 425 - -
Aev09g2212 659 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 1 657 - -
Aev09g2212 659 ProSitePatterns Zinc finger C2H2 type domain signature. 78 99 IPR013087 -
Aev09g2212 659 SMART c2h2final6 76 98 IPR013087 -
Aev09g2212 659 MobiDBLite consensus disorder prediction 279 298 - -
Aev09g2212 659 Coils Coil 247 298 - -
Aev09g2212 659 MobiDBLite consensus disorder prediction 499 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2212 Aev-Chr9 24843811 24847307 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2212 18 657 C2H2 Transcription Factor Family AT4G25610 43.313 1.91e-153 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev09g2212 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2212 - - gmx:100799153 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2212 09 24843811 24847307 Aev09g2212 09 24843811 24847307 ECH
Aev05g2901 05 29816728 29821411 Aev09g2212 09 24843811 24847307 PCT