Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2193 ATGGTATCCAAAAACCCGAACCCGTCAGAGGGGTTCTACTTGGATCCCAGTGCGCTTCCAAGCATCGTTCCATTCGCTGCTGCCACCACGATGGCGTCGAACGCCAACTCGCCGGAGGATGCTGCCAAGAAGACGCGGAAGCCATACACTATCACTAAGTCCAGGGAGAGCTGGACTGAACCAGAACACGACAAGTTCCTTGAAGCTCTTCAATTGTTTGACCGTGACTGGAAAAAGATTGAAGCATTTGTTGGATCAAAGACTGTCATTCAGATACGTAGCCATGCTCAGAAATACTTTCTAAAGGTTCAGAAGAATGGGACAAGTGAGCATCTTCCTCCACCCAGACCGAAAAGAAAAGCCGCTCATCCATATCCTCAAAAAGCTTCCAAAAATGCCCCAGTACTCTCACAAGTATCAGGATCCTTTCAGTCTTCATCTGCTTTGCTTGAACCTGGATATATCCTACATCATGATTCTTCAGCAATGCTTAAAGCTCCTATTATTAACACTGCAGTGTCTTCCTGGTCAAACAACACCTTCCAGCAAGCAGCCAATGTATTACATGGTCAAAAAGTGAATAATTGTTGCAGTAGCAGTGAAAGCACTCCTAGAGCTCGACCATTTGGTGAATCAAATATTCAAGGGAATAATAGTCATCCATTGAGAGTTCTTCCAGATTTTACTCAGGTATACAGCTTCATTGGCAGTGTATTTGACCCAAATGAAACTGGACATCTACAGAAACTAAAAAGGATGGACCCTATAGATGTTGAGACGGTACTACTGTTGATGAGAAATCTGTCTATCAATTTAACAAGCCCAGACTTTGAGGATCATAGAAGGCTGCTAGCCTCATATGAGGTGGAATAG 873 0.4399 MVSKNPNPSEGFYLDPSALPSIVPFAAATTMASNANSPEDAAKKTRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHLPPPRPKRKAAHPYPQKASKNAPVLSQVSGSFQSSSALLEPGYILHHDSSAMLKAPIINTAVSSWSNNTFQQAANVLHGQKVNNCCSSSESTPRARPFGESNIQGNNSHPLRVLPDFTQVYSFIGSVFDPNETGHLQKLKRMDPIDVETVLLLMRNLSINLTSPDFEDHRRLLASYEVE* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2193 290 ProSiteProfiles SANT domain profile. 53 106 IPR017884 -
Aev09g2193 290 ProSiteProfiles Myb-like domain profile. 50 100 IPR001005 -
Aev09g2193 290 CDD SANT 57 100 IPR001005 -
Aev09g2193 290 SUPERFAMILY Homeodomain-like 49 105 IPR009057 -
Aev09g2193 290 Gene3D - 58 105 - -
Aev09g2193 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 50 104 IPR017930 -
Aev09g2193 290 SMART sant 54 102 IPR001005 -
Aev09g2193 290 Pfam Myb-like DNA-binding domain 55 100 IPR001005 -
Aev09g2193 290 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 53 102 IPR006447 GO:0003677
Aev09g2193 290 PANTHER SWI/SNF COMPLEX-RELATED 3 290 - -
Aev09g2193 290 MobiDBLite consensus disorder prediction 105 133 - -
Aev09g2193 290 PANTHER PROTEIN REVEILLE 6 3 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2193 Aev-Chr9 24735008 24738247 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Aev09g2193 Myb_DNA-binding 3.5e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2193 - - aip:107619038 482.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2873 05 29617055 29620815 Aev09g2193 09 24735008 24738247 ECH
Aev09g2193 09 24735008 24738247 Aev09g2193 09 24735008 24738247 ECH