Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2176 ATGGAACAGAAGCACGTGCTGTTGTCAGCATTGAGTGTTGGGGTTGGGTTAGGTGTTGGGTTGGGATTGAGTTCATCAGGGCAGAAATGGGTTAATGGAGGGAATCGTGAGGCTGATGAGGTTTCTGCAGAGCAGATTGTGCAGGAGCTCAAGAATCAGATGATTGATGGCAAGAGTATGAAAGTCACATTTGATGACTTTCCATATTACTTGAGTGAAAAAACTCGAGTTTTGTTGACAAGTGCTGGATATGTTCATTTGAAACAAGAACACTTTTCCAAGCACATGAAGAACCTTTCACCAGTAAGCAGAGCTATCTTGCTTTCAGGAACTACAGAAATTTACCAGCAAATGCTTGCCAAAGCTTTAGCACATTTTTTTGAGTCCAAGTTGCTGATGCTAGATATTACTGACTTCTCTTTGAAGATGCAGAGCAAATATGGATGTTCTATGAAAGGACCATATTTGAAAAGATCTTTTTCTGAGGTGACTATGGAGCGAATGTCTGGTTTATTCAGTTCTTTCTCACTCCTGCCACCATCAGGCGAAACTAGAGGTACTCTACGTAGGCAAAACAGTGGAACTGATACTCCTAAATCTAATAGTTCACCAAAGCTTCGTAGGACTTCCTCTTCTTCATCTGATATAAGTAGCTCCTTCTCACATAGTCCAATAGATTCAGCTCCATTGAAGCGGACAAGTAGCTTCTGCTTTGATGAAAGGCTCTTTGTGCATTCACTTTTCAAGCTCTTGGTATCTGTCTCAGAAACTGGTTCCATTATTTTATACATCAGGGATGTTGAGAAGCTCTTTCTTCGATCACAAAGGATTTACAACATGTTACAAAAGCTAATGAAGAGAATTTCAGGGCCAGTATTGATACTGGGTTCCCAGACCATTGATTCAGAAACTAGTAATAAAGAGGTTAATGAAAGGCTCAACATATTATTCCCTTACAACATCGAGATCAAGCCGCCGGAAGATGAGGCTCAAGTCGGCAACTGGAAAGTCCAACTCGACGAGGACATGAAAGTACTTCAGTTTCAAGATAGCAGAAACCACATTGCTGAAGTGCTTGCAGAAAATGACATTGATTGTGATGACTTGAATTCAATCTGCCATAGTGATACCATGTTACTAAGTAACTATATTCAAGAAGTTGTGGTATCTGCAATTTCTTACCATTTAATGAATACTAAGGATCCAGAATACAGAAATGGAAGGCTAGTTATATCTGCCAAGAGTTTGTGCCAGGGGTTGAATCTTTTCCAAGGAGGAAAAAGTAGTGGGAAAGATAATATGAAGACTAATGAAGCTAACAAGGATGATGCTGGAGAAGATGTTAGTGGTCCAAAGAATGATATTTGGATTGAAACCCCGATAGCACCTGACAACAAAAGTGACACAGCTATCGCAGTTACAAAGAAGGATGGCGACAACAATGCTCCTGCAAAAGCTGAAGTTCCTCCTGATAATGAGTTTGAGAAGCGCATAAGACCAGAAGTCATACCCCCAAGTGAGATTGGAGTCACATTTGCTGATATTGGTGCATTGGATGATATCAAAGAATCACTTCAAGAGGTTGTCATGCTTCCCCTTAGAAGACCAGATCTCTTCAAAGGTGGCCTTCTAAAGCCTTGTAGAGGTATACTGCTATTTGGTCCTCCTGGTACAGGAAAGACTATGTTAGCAAAGGCAATTGCAAATGAAGCTGGAGCTAGTTTCATCAATGTTTCAATGTCCACCATCACTTCAAAGTGGTTTGGAGAAGATGAAAAGAACGTCCGAGCTTTGTTCACTCTTGCAGCAAAGGTTGCTCCAACCATTATTTTTGTTGATGAAGTTGATAGCATGCTTGGGCAGAGGACTAGAGTTGGTGAGCATGAGGCAATGAGGAAGATTAAAAATGAGTTCATGACCCATTGGGATGGACTGCTGACAAAACCTGGTGAGCAGATCCTGGTTCTTGCTGCAACCAACAGGCCATTTGATCTTGATGAAGCTATTATAAGACGATTTGAGCGCAGGATCATGGTTGGTCTTCCATCTGTTGAAAACAGGGAAATGATCTTGAAAACCCTTCTATCCAAGGAAAAACATGAAAATATAGACTTCAAAGAGCTTGCAACCATGACAGAAGGATATAGTGGAAGTGATCTTAAGAATTTGTGCATGACTGCTGCATATCGACCTGTTAGGGAGCTACTAAAGAAGGAGACCATGAAGGAAAAGGAAAAGAAGAAAAAAGAAGATGAAGACCAAAGCTCAGAAGATGCTTCCAATGCTACAGAAGATAATAAAGAAGCCCAAGAAGTTACCCTAAGGCCTTTAACCATGGAAGATATGAGACAAGCAAAGAGTCAGGTGGCTGCAAGTTTTGCAGCAGAAGGATCAATAATGAGTGAGCTAAAGCAGTGGAATGATTCATATGGAGAAGGAGGTTCAAGGAAGAAACAACAGCTCACTTATTTCCTTTAG 2478 0.4088 MEQKHVLLSALSVGVGLGVGLGLSSSGQKWVNGGNREADEVSAEQIVQELKNQMIDGKSMKVTFDDFPYYLSEKTRVLLTSAGYVHLKQEHFSKHMKNLSPVSRAILLSGTTEIYQQMLAKALAHFFESKLLMLDITDFSLKMQSKYGCSMKGPYLKRSFSEVTMERMSGLFSSFSLLPPSGETRGTLRRQNSGTDTPKSNSSPKLRRTSSSSSDISSSFSHSPIDSAPLKRTSSFCFDERLFVHSLFKLLVSVSETGSIILYIRDVEKLFLRSQRIYNMLQKLMKRISGPVLILGSQTIDSETSNKEVNERLNILFPYNIEIKPPEDEAQVGNWKVQLDEDMKVLQFQDSRNHIAEVLAENDIDCDDLNSICHSDTMLLSNYIQEVVVSAISYHLMNTKDPEYRNGRLVISAKSLCQGLNLFQGGKSSGKDNMKTNEANKDDAGEDVSGPKNDIWIETPIAPDNKSDTAIAVTKKDGDNNAPAKAEVPPDNEFEKRIRPEVIPPSEIGVTFADIGALDDIKESLQEVVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVAPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMTHWDGLLTKPGEQILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREMILKTLLSKEKHENIDFKELATMTEGYSGSDLKNLCMTAAYRPVRELLKKETMKEKEKKKKEDEDQSSEDASNATEDNKEAQEVTLRPLTMEDMRQAKSQVAASFAAEGSIMSELKQWNDSYGEGGSRKKQQLTYFL* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2176 825 MobiDBLite consensus disorder prediction 740 771 - -
Aev09g2176 825 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 510 746 IPR027417 -
Aev09g2176 825 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 825 - -
Aev09g2176 825 SMART AAA_5 546 683 IPR003593 -
Aev09g2176 825 MobiDBLite consensus disorder prediction 740 791 - -
Aev09g2176 825 Coils Coil 732 752 - -
Aev09g2176 825 MobiDBLite consensus disorder prediction 176 225 - -
Aev09g2176 825 MobiDBLite consensus disorder prediction 434 449 - -
Aev09g2176 825 CDD AAA 548 681 - -
Aev09g2176 825 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 825 - -
Aev09g2176 825 Gene3D - 509 767 IPR027417 -
Aev09g2176 825 MobiDBLite consensus disorder prediction 427 460 - -
Aev09g2176 825 Pfam ATPase family associated with various cellular activities (AAA) 550 680 IPR003959 GO:0005524|GO:0016887
Aev09g2176 825 Gene3D - 682 764 - -
Aev09g2176 825 Pfam AAA+ lid domain 702 745 IPR041569 -
Aev09g2176 825 ProSitePatterns AAA-protein family signature. 653 672 IPR003960 GO:0005524|GO:0016887
Aev09g2176 825 MobiDBLite consensus disorder prediction 806 825 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2176 Aev-Chr9 24650142 24655490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2176 510 784 Calmodulin-binding Proteins AT3G56690 36.559 1.69e-43 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2176 - - gmx:100804099 1169.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2176 09 24650142 24655490 Aev09g2176 09 24650142 24655490 ECH
Aev09g2176 09 24650142 24655490 Aev05g2835 05 29382199 29391847 PCT