Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2148 ATGGACTGGATGCGAGGGGAGGTGGAGACGAGGCTGAGGGTGGAGGTGAGGTGGAAGCGAGACCGATGGTGGAGCCGAGGCCGAGGGCGCGGCAGTGGAGATGAGGCGATGTCGATGAGAACGGAGAAGATGAGAAGACAATGGATCGAAGAGGGTGGTGGAGTTTTGGTGAATCTCTCACATGGAATGGCAGATCTTGCTAGCTCCGTGAATGTCGACCGTGACATCCACCAGGCATTAACTGCTTTGAAAAAGGGTGCTCAGCTTCTTAAATATGGTCGTAAGGGAAAGCCCAAGTTTTGTCCATTTAGACTTTCCAGTGATGAATCATCTTTGATCTGGATTTCAAGTAGTGGAGAAAGAAGTCTGAAGCTATCTTCTGTCTCAAGAATTGTTCCTGGACAAAGAACTGCTGTTTTCCAACGTCACCTGCGCCCTGAGAAAGACTATTTGTCTTTTTCACTTATTTATAACAACGGGAAGCGATCCCTTGATTTGATTTGCAAGGATAGAACTGAGGCAGAAGTTTGGATTGCTGGCCTCAAAGCACTGATATCTTCTGGTCAAGGTGGGCGGTCCAAAATTGATGGATGGAGTGATGGGGGCCTATATATTGATGATAGTAGGGACCTGACATCAAGTAGTCCGAGTGGAAGTTCAGCAAGTGCTTCATTAGACATCAGTTCTCCTGAAGTTTCTGTTAGTCTGCCTAATACCTTTAATTTTGAAAGGTCACATGCACCATCAAATATGCAAGTGAAAGGTTCTGGTTCAGATGTTTTTCGTGTTAGTGTTTCAAGTGCCCCCAGCACATCCAGTCATGGGTCTGCACCAGATGATTATGATGCTCTGGGTGATGTATACATATGGGGTGAAGTTATCTGTGAGAACAGTGTGAAAGTTGGTGCTGACAAAAGTGTCAGTTATTTCAGCCCAAGGACAGATGTTCTCCTCCCCAAGCCATTGGAGTCCAATGTGGTTTTAGATGTACTTCAAATTGCATGTGGTGTTAAACATGCTGCTCTAGTCACTAGGCAAGGTGAAATTTTTACTTGGGGTGAAGAATCTGGAGGACGCCTTGGCCATGGTGTTGGGAAGAATGTGGTACAACCACGTCTAGTTGAAGCATTGGCTTCGACAACTGTTGATTTTGTTGCCTGTGGGGAATTCCATACATGTGCTGTTACAATGGCTGGGGACATATATACATGGGGCGATGGTACTCATAATGCTGGCCTTCTTGGTCATGGCACCGATGTTAGTCACTGGATACCAAAGAGAATTGCAGGTCCACTAGAGGGTCTTCAAGTTGCTTTTGTCACCTGTGGTCCTTGGCACACAGCCTTGATAACTTCAACGGGGCAGCTCTTTACATTTGGCGATGGAACATTTGGTGTCCTGGGCCATGGAGATAGGGAAAATGTTTCATATCCAAGAGAAGTAGAGTCATTATCAGGGTTGAGGGCAATAGCTGTTGCATGTGGAGTGTGGCATACTGCAGCTGTTGTAGAGGTTATTGTTACACAATCCAGTGCAAGTGTATCTTCCGGAAAATTGTTTACTTGGGGTGATGGGGATAAGAATCGTCTTGGACATGGAGACAAGGAGGCACGGCTGGAGCCAACCTGCGTTCCTTCACTTATTGATTACAATTTTTATAAAATAGCCTGTGGGCACAGTTTGACAGTAGGCCTGACAACATCAGGACATGTTTTTACTATGGGAAGCACTGTTTATGGTCAGCTCGGGAATCCTCAGACTGACGGAAAGCTGCCCTGCTTGGTTGAAGACAAGCTTGCTGGAGAATCTGTCGAAGAAATTGCATGCGGTGCATATCATGTAGCTGTTTTAACATCCAAAAATGAGGTTTATACATGGGGGAAGGGTGCAAATGGGAGATTGGGTCATGGGGATGTCGAAGATAGAAAAACACCAACATTGGTTGAAGCCTTGAAGGATAGACATGTGAAATATATTGCATGTGGTTCAAACTATTCTGCTGCCGTTTGCCTTCATAAATGGGTATCTGGTGCTGAGCAGGCTCAGTGCTCTACTTGTAGACAGGCATTTGGGTTCACTAGAAAGAGGCACAACTGTTATAATTGTGGACTTGTGCACTGCCATGCTTGCAGTTCAAGGAAAGCATTAAGAGCAGCCTTGGCTCCTAATCCTGCAAAGCCGTACCGTGTTTGTGATTCTTGTTATGCAAAATTGAACAAGTATGCAGAATCTGGCAATAATATTCGGAGGAATGCTATGCCTCGTTTGTCGGGTGAAAACAAGGACAGGTTAGACAAGTCTGAGCTAAGAATGACCAAATCAGCAGTTCCTTCTAACATGGATTTGATAAAGCAGCTTGATAGTAAGGCAGCCAAACAGGGGAAGAAAGCTGATACATTTTCTCTTGTTCGAACCTCACAAACACCTTCTTTGCTACAGCTGAAAGATGTTGTCTTCTCTACAGCTATTGATCTGAAACGAACGGCTCCAAAACCCGTTCTAATATCATCTGGGGTCAGTTCCAGGTCCGTCTCTCCTTTCTCCAGAAGATCGAGCCCTCCTCGTTCAGCTACTCCTATCCCAACAACATCAGGGCTTTCCTTCTCAAAAAGTATTGCTGATAGTTTGAAGAAAACAAATGAACTTTTAAACCAAGAAGTGCTGAAGTTGCGCACTCAGGTTGAGACCCTGAGACAGAGATGTGAACTACAAGAATCAGAGCTTCAAAGGTCAGCAAAAAAGACTCAGGAAGCTGTGGCACTGGCTGCTGAGGAATCTGCCAAATCTAGAGCTGCAAAAGAAGTTATAAAGTCTCTTACAGCGCAGCTCAAAGATCTGGCCGAGAGACTTCCTCCTGGTGTTTATGATGCTGAGAACATCAAACCAGCTTACTTGCCAAATGGTTTGGAGTCAAATGGCATCCACCATCCAGAAAACGGGGTACGCCACAACAGGGCAGAGTCAATCAGTGGCTCTAGTTTAGCTTCCATAAGATTTGAACCTACTCTGATGAACAGATCTGAGGATAATTTGCCAGGAAGTTATGGAACTAATCTTTACCAGCAAAACCAGGGGCTTCTTGCCTCTAATGGGACAGATGACTTTCCAGATGTTAAATTGCCGAATGGCAGCAGCGTGATTCGTGCAAGTAACAGTAGCATGTCTGACACTGTTGATGGCAGGGATTCTGGGAATTTTCAAGATGATGAAAGTGGTTCTAGAATGAGGAGTGATGTACTGGCTACAAATAGTAATCAGATTGAGGCAGAATGGATTGAACAGTATGAACCTGGTGTCTATATAACACTCGTAGCCCTGCGTGACGGAACAAGAGATCTAAAGAGAGTGCGCTTCAGCCGGAGAAGATTTGGCGAGCACCAAGCAGAGACTTGGTGGTCAGAGAACCGAGACAAGGTATACGAGAAGTACAATGTTCGCAGCGCAGACAAGTCTTCCGGCCAAGCAGCGCGAAGGACAGAGAGTGCTGGTTTACCTGTTACATAA 3504 0.4546 MDWMRGEVETRLRVEVRWKRDRWWSRGRGRGSGDEAMSMRTEKMRRQWIEEGGGVLVNLSHGMADLASSVNVDRDIHQALTALKKGAQLLKYGRKGKPKFCPFRLSSDESSLIWISSSGERSLKLSSVSRIVPGQRTAVFQRHLRPEKDYLSFSLIYNNGKRSLDLICKDRTEAEVWIAGLKALISSGQGGRSKIDGWSDGGLYIDDSRDLTSSSPSGSSASASLDISSPEVSVSLPNTFNFERSHAPSNMQVKGSGSDVFRVSVSSAPSTSSHGSAPDDYDALGDVYIWGEVICENSVKVGADKSVSYFSPRTDVLLPKPLESNVVLDVLQIACGVKHAALVTRQGEIFTWGEESGGRLGHGVGKNVVQPRLVEALASTTVDFVACGEFHTCAVTMAGDIYTWGDGTHNAGLLGHGTDVSHWIPKRIAGPLEGLQVAFVTCGPWHTALITSTGQLFTFGDGTFGVLGHGDRENVSYPREVESLSGLRAIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLGHGDKEARLEPTCVPSLIDYNFYKIACGHSLTVGLTTSGHVFTMGSTVYGQLGNPQTDGKLPCLVEDKLAGESVEEIACGAYHVAVLTSKNEVYTWGKGANGRLGHGDVEDRKTPTLVEALKDRHVKYIACGSNYSAAVCLHKWVSGAEQAQCSTCRQAFGFTRKRHNCYNCGLVHCHACSSRKALRAALAPNPAKPYRVCDSCYAKLNKYAESGNNIRRNAMPRLSGENKDRLDKSELRMTKSAVPSNMDLIKQLDSKAAKQGKKADTFSLVRTSQTPSLLQLKDVVFSTAIDLKRTAPKPVLISSGVSSRSVSPFSRRSSPPRSATPIPTTSGLSFSKSIADSLKKTNELLNQEVLKLRTQVETLRQRCELQESELQRSAKKTQEAVALAAEESAKSRAAKEVIKSLTAQLKDLAERLPPGVYDAENIKPAYLPNGLESNGIHHPENGVRHNRAESISGSSLASIRFEPTLMNRSEDNLPGSYGTNLYQQNQGLLASNGTDDFPDVKLPNGSSVIRASNSSMSDTVDGRDSGNFQDDESGSRMRSDVLATNSNQIEAEWIEQYEPGVYITLVALRDGTRDLKRVRFSRRRFGEHQAETWWSENRDKVYEKYNVRSADKSSGQAARRTESAGLPVT* 1168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2148 1167 MobiDBLite consensus disorder prediction 1146 1167 - -
Aev09g2148 1167 PANTHER REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-CONTAINING PROTEIN 75 1150 - -
Aev09g2148 1167 SUPERFAMILY FYVE/PHD zinc finger 673 749 IPR011011 -
Aev09g2148 1167 MobiDBLite consensus disorder prediction 837 864 - -
Aev09g2148 1167 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 75 1150 - -
Aev09g2148 1167 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 621 672 IPR000408 -
Aev09g2148 1167 MobiDBLite consensus disorder prediction 1044 1061 - -
Aev09g2148 1167 Pfam Pleckstrin homology domain 78 185 IPR001849 -
Aev09g2148 1167 SMART fyve_4 669 740 IPR000306 GO:0046872
Aev09g2148 1167 SUPERFAMILY PH domain-like 75 185 - -
Aev09g2148 1167 Gene3D - 75 191 IPR011993 -
Aev09g2148 1167 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 517 568 IPR000408 -
Aev09g2148 1167 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 454 505 IPR000408 -
Aev09g2148 1167 CDD FYVE_like_SF 682 735 - -
Aev09g2148 1167 Pfam Transcription factor regulating root and shoot growth via Pin3 1088 1143 IPR013591 -
Aev09g2148 1167 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 333 343 IPR000408 -
Aev09g2148 1167 MobiDBLite consensus disorder prediction 1027 1077 - -
Aev09g2148 1167 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 285 346 IPR000408 -
Aev09g2148 1167 Pfam Regulator of chromosome condensation (RCC1) repeat 568 617 IPR000408 -
Aev09g2148 1167 Pfam Regulator of chromosome condensation (RCC1) repeat 516 563 IPR000408 -
Aev09g2148 1167 Pfam Regulator of chromosome condensation (RCC1) repeat 622 669 IPR000408 -
Aev09g2148 1167 Pfam Regulator of chromosome condensation (RCC1) repeat 454 502 IPR000408 -
Aev09g2148 1167 Pfam Regulator of chromosome condensation (RCC1) repeat 347 395 IPR000408 -
Aev09g2148 1167 Pfam Regulator of chromosome condensation (RCC1) repeat 399 450 IPR000408 -
Aev09g2148 1167 CDD PH_PLC_plant-like 74 186 - -
Aev09g2148 1167 SUPERFAMILY RCC1/BLIP-II 284 674 IPR009091 -
Aev09g2148 1167 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 440 450 IPR000408 -
Aev09g2148 1167 Coils Coil 873 914 - -
Aev09g2148 1167 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 347 398 IPR000408 -
Aev09g2148 1167 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 399 453 IPR000408 -
Aev09g2148 1167 Gene3D - 241 509 IPR009091 -
Aev09g2148 1167 PRINTS Chromosome condensation regulator RCC1 signature 558 576 IPR000408 -
Aev09g2148 1167 PRINTS Chromosome condensation regulator RCC1 signature 440 456 IPR000408 -
Aev09g2148 1167 PRINTS Chromosome condensation regulator RCC1 signature 349 365 IPR000408 -
Aev09g2148 1167 PRINTS Chromosome condensation regulator RCC1 signature 330 343 IPR000408 -
Aev09g2148 1167 PRINTS Chromosome condensation regulator RCC1 signature 456 470 IPR000408 -
Aev09g2148 1167 PRINTS Chromosome condensation regulator RCC1 signature 399 415 IPR000408 -
Aev09g2148 1167 PRINTS Chromosome condensation regulator RCC1 signature 616 637 IPR000408 -
Aev09g2148 1167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 670 746 IPR013083 -
Aev09g2148 1167 ProSitePatterns Regulator of chromosome condensation (RCC1) signature 2. 492 502 IPR000408 -
Aev09g2148 1167 ProSiteProfiles BRX domain profile. 1089 1144 IPR013591 -
Aev09g2148 1167 Gene3D - 510 669 IPR009091 -
Aev09g2148 1167 Coils Coil 929 949 - -
Aev09g2148 1167 Pfam Transcription factor BRX N-terminal domain 924 959 IPR027988 -
Aev09g2148 1167 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 677 739 IPR017455 -
Aev09g2148 1167 Pfam FYVE zinc finger 673 739 IPR000306 GO:0046872
Aev09g2148 1167 ProSiteProfiles Regulator of chromosome condensation (RCC1) repeat profile. 569 620 IPR000408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2148 Aev-Chr9 24485981 24497847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2148 1068 1160 Major Intrinsic Protein MIP AT1G31880 43.011 3.94e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2148 - - gmx:100783270 1872.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g2822 05 29250831 29257533 Aev09g2148 09 24485981 24497847 PCT