Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2119 ATGTGCTTGCCAACGGTGGCGCACCAGAGAGGTTCAGGCGAGTTCACAAGGTTCACGGCGGAGAAAGGCGGCGATGAAGAAGAGGAAGCCAGTTTCCGAGAAGGCGGTGGTGGTGGAACCTCATCATCAGGACCACCTGCAGGTGGGGTGGCAGGAATGGTTTCAGAGCTGACACAAGTGGTAACAGGGCATGGGCATGGGCAGGCCCACCAAGGAACCGGTTTTCCTATGATGTCAGGTTTTATGCAACTTCCTTATTATTCCTATTCTTCTCCTCATCACGCTTCTTTCTCTTCTTCTTCGGCCTCTGTTTTGGGGTCACCCTCTGCCTCTGCCTCTTCCTCGTGGGTTGGGCACAAAAGAGGGCGTGACCAAGAGCCAAGTGGTGCTGCTTCTTCTTCTTCTGCTCATCAATTGGTGCAAGATGTGACTAGGTTTTATAGGACCATTGGTGGTGGTGGTGACTTTAGAGTACCTTCTTCTTCCCAAGGACATGGAGACTCATCATCATCACGTGCAATTGTGACAGAAGAAGCAACAAACACTGCCGCCACAACCTCTTCCACCGCCACCGCACTGGCATCATCAGCAGCAACAACACCATCCGGCGAAGAAACAGGGGAGAGGAAGAGAAGATACAGGGGAGTGAGGCAGAGACCATGGGGAAAATGGGCAGCGGAAATTCGTGATCCACACAAAGCAGCAAGAGTGTGGCTCGGCACGTTTGAAACAGCAGAGGCCGCAGCAAGAGCTTACGATGAAGCCGCATTGAGATTCAGAGGAAACAGAGCAAAACTCAACTTCCCTGAAAATGTCAGAGCATTGCCAATTCCACCACAACCACCGCAACTTCACAATTTTCCGGCGGTTTCGCCCACAGCTCATGACTCTCCTGCACCCCTTTTCCGGCCACCGCCATTTATGCAGGCGGCGCCACCACAACAACCACCTTTTCAGGGCTCCTCTGATATCAGAGACTACTTGCAATACTCTCAGTTGTTGAGAAGTTCTGGTGATTTTCATGGATTCGACCAGTGGTTGTATGATTCACAAATGGTTTTGCCTCAATCTTCTCTAATGCCATCGTCTTCGTCTTCTTCTTCATCATCAGCTGAATTTTCACCGTCTAGTCAATTGTCCTCTGCTTCCTTTCCCCTGTTTTCTTCGAGTCAGCAAGTGGGGTTTTTAATGCCGCCGTGGGAGCATTCTCAAGGCGGCGGAGACGGCGGAGGAAGTGGCGGCTCTGGTTTTCCGCCTTCAACTTGGTCAGATACCGGTGGCTTTCCTCCTCCTTCTGGTTGA 1302 0.5161 MCLPTVAHQRGSGEFTRFTAEKGGDEEEEASFREGGGGGTSSSGPPAGGVAGMVSELTQVVTGHGHGQAHQGTGFPMMSGFMQLPYYSYSSPHHASFSSSSASVLGSPSASASSSWVGHKRGRDQEPSGAASSSSAHQLVQDVTRFYRTIGGGGDFRVPSSSQGHGDSSSSRAIVTEEATNTAATTSSTATALASSAATTPSGEETGERKRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTFETAEAAARAYDEAALRFRGNRAKLNFPENVRALPIPPQPPQLHNFPAVSPTAHDSPAPLFRPPPFMQAAPPQQPPFQGSSDIRDYLQYSQLLRSSGDFHGFDQWLYDSQMVLPQSSLMPSSSSSSSSSAEFSPSSQLSSASFPLFSSSQQVGFLMPPWEHSQGGGDGGGSGGSGFPPSTWSDTGGFPPPSG* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2119 433 PANTHER DNA-BINDING DOMAIN 50 401 IPR044808 GO:0003700|GO:0009873
Aev09g2119 433 SMART rav1_2 212 275 IPR001471 GO:0003700|GO:0006355
Aev09g2119 433 MobiDBLite consensus disorder prediction 416 433 - -
Aev09g2119 433 ProSiteProfiles AP2/ERF domain profile. 212 269 IPR001471 GO:0003700|GO:0006355
Aev09g2119 433 Gene3D AP2/ERF domain 211 271 IPR036955 GO:0003700|GO:0006355
Aev09g2119 433 MobiDBLite consensus disorder prediction 1 51 - -
Aev09g2119 433 Pfam AP2 domain 212 261 IPR001471 GO:0003700|GO:0006355
Aev09g2119 433 PRINTS Ethylene responsive element binding protein signature 235 251 IPR001471 GO:0003700|GO:0006355
Aev09g2119 433 PRINTS Ethylene responsive element binding protein signature 213 224 IPR001471 GO:0003700|GO:0006355
Aev09g2119 433 MobiDBLite consensus disorder prediction 179 203 - -
Aev09g2119 433 MobiDBLite consensus disorder prediction 19 33 - -
Aev09g2119 433 MobiDBLite consensus disorder prediction 97 137 - -
Aev09g2119 433 MobiDBLite consensus disorder prediction 179 218 - -
Aev09g2119 433 SUPERFAMILY DNA-binding domain 212 270 IPR016177 GO:0003677
Aev09g2119 433 MobiDBLite consensus disorder prediction 154 173 - -
Aev09g2119 433 MobiDBLite consensus disorder prediction 395 433 - -
Aev09g2119 433 MobiDBLite consensus disorder prediction 298 313 - -
Aev09g2119 433 MobiDBLite consensus disorder prediction 97 118 - -
Aev09g2119 433 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF110 50 401 - -
Aev09g2119 433 MobiDBLite consensus disorder prediction 290 322 - -
Aev09g2119 433 CDD AP2 212 271 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2119 Aev-Chr9 24232158 24234059 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2119 204 296 AP2-EREBP Transcription Factor Family AT2G33710 65.591 2.26e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev09g2119 AP2 5.3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2119 - - lja:Lj5g3v1937400.1 299.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2119 09 24232158 24234059 Aev09g2119 09 24232158 24234059 ECH
Aev05g2784 05 28905949 28908155 Aev09g2119 09 24232158 24234059 PCT