Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2070 ATGGCTGCCTCTTCCGCCGGCAATCCACCAACCGCCTCCGCGTCCTCTGTCGCCGCAGCATTATCTCGCGAAAACTTGAATTTCTCGCCCGATTATCCCGCGCGAATCGCACTCACGTCGGATCAGGTCAATTTCTGCACGCAAGCGCTCTTCTTCTTCAAGGACAAGTTCCACAATCCTCACACGATCTCCCAAGAGTTCGCTCACTTGCAGGCGAATAGGATAACGCCTAGTGAGAGGAGGAGAAGATGTACTGTGGCTATGGATGCTGTCAATTTGGGCAAGAATCGTTACACCGATGTCTTACCGTTTGACAATAATAGGGTTGTGCTAAATTCAAGTTCAGATTATAGGCCTGCAGCACAGGGCTATGTGAATGCAAGCTTAATTTCGACCTCCTCGCCTGGAGTTGTATCCCAGTTTATAGCCACGCAAGGGCCGCTACCACACACTTACGAAGATTTCTGGGAAATGGTTATCCAATATCACTGCCCTGCAATTGTGATGCTTACTAAGTTGGTTGACCATTACAGGATGGTAAAGTGTGGAGATTATTTCCAAGCTGAGGATGGACCTAGAGAATGTGGTAATGTCTCTATTGTCAGTAAATGGATAAAATCTACTGAAACTTCACTGATGTTGCGCCATTTGGAGGTCAACCATAGAGAGGCCGAAGATCCACCATTATCTGTTTTGCACGTTCAGTATCCTGAATGGCCTGACCATGGAGTTCCTAATGATACATCTGCTGTGCGTGAGATTCTGAAACGATTGTATCATTTACCACCAAACCTTGGCCCAATAGTGGTGCACTGCAGTGCAGGTATTGGTAGAACTGGAACATACTGCACAATTCACAACACAATTCAGAGGATACTTGCCGGTGATATGTCTGCTTTAAATATTGCTAATACAATAGCTATGTTTAGGTCCCAGCGTATTGGGATGGTACAGACCCAGGATCAGTACAATTTCTGCTATCAAGCTATCATAGATGAATTGGAAGACCTTGTATCTCCACAGTAA 1026 0.4581 MAASSAGNPPTASASSVAAALSRENLNFSPDYPARIALTSDQVNFCTQALFFFKDKFHNPHTISQEFAHLQANRITPSERRRRCTVAMDAVNLGKNRYTDVLPFDNNRVVLNSSSDYRPAAQGYVNASLISTSSPGVVSQFIATQGPLPHTYEDFWEMVIQYHCPAIVMLTKLVDHYRMVKCGDYFQAEDGPRECGNVSIVSKWIKSTETSLMLRHLEVNHREAEDPPLSVLHVQYPEWPDHGVPNDTSAVREILKRLYHLPPNLGPIVVHCSAGIGRTGTYCTIHNTIQRILAGDMSALNIANTIAMFRSQRIGMVQTQDQYNFCYQAIIDELEDLVSPQ* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2070 341 SMART PTPc_3 62 335 IPR000242 GO:0004725|GO:0006470
Aev09g2070 341 ProSitePatterns Tyrosine specific protein phosphatases active site. 270 280 IPR016130 GO:0016311|GO:0016791
Aev09g2070 341 CDD PTPc_plant_PTP1 124 327 - -
Aev09g2070 341 PANTHER PROTEIN-TYROSINE-PHOSPHATASE PTP1 13 339 - -
Aev09g2070 341 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 48 335 IPR029021 -
Aev09g2070 341 Gene3D Protein tyrosine phosphatase superfamily 39 335 IPR029021 -
Aev09g2070 341 SMART ptp_7 230 332 IPR003595 -
Aev09g2070 341 Pfam Protein-tyrosine phosphatase 92 331 IPR000242 GO:0004725|GO:0006470
Aev09g2070 341 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 252 324 IPR000387 GO:0016311|GO:0016791
Aev09g2070 341 ProSiteProfiles PTP type protein phosphatase domain profile. 63 333 IPR000242 GO:0004725|GO:0006470
Aev09g2070 341 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 13 339 - -
Aev09g2070 341 PRINTS Protein tyrosine phosphatase signature 229 246 IPR000242 GO:0004725|GO:0006470
Aev09g2070 341 PRINTS Protein tyrosine phosphatase signature 300 315 IPR000242 GO:0004725|GO:0006470
Aev09g2070 341 PRINTS Protein tyrosine phosphatase signature 141 161 IPR000242 GO:0004725|GO:0006470
Aev09g2070 341 PRINTS Protein tyrosine phosphatase signature 123 130 IPR000242 GO:0004725|GO:0006470
Aev09g2070 341 PRINTS Protein tyrosine phosphatase signature 267 285 IPR000242 GO:0004725|GO:0006470
Aev09g2070 341 PRINTS Protein tyrosine phosphatase signature 316 326 IPR000242 GO:0004725|GO:0006470
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2070 11 339 Protein tyrosine phosphatase (PTP) family AT1G71860 67.477 8.48e-168 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2070 - - gmx:100791465 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2070 09 23884707 23887792 Aev09g2070 09 23884707 23887792 ECH