Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2062 ATGGGTATCTCGAATCTTCTCTTGTTTTACTTCTCTATGGTGGGTTTGTGTGCTTTGGCGACTGGCAAAGTGGTGCTGATTGGGAACAACATCACTCTCTCCTTCGATGATATTGAAGCTAATTTCGCTCCGACGATAAAAGGGTCTGGAGAATGCGGGGTCTTATATTTGGCAGAGCCGCTTGATGGTTGTGCTGAGCTGACAAACAAAGCTGAATATCTTCCAAATGCGACTTCTTCTTTTGTTTTGGTGGTTAGAGGGGGATGTAGCTTTGAGGACAAGGTCAGGAGGGCACAAAATGCTGGCTACAAAGCTGTAATTGTCTATGACAATGAAGATGGCGGTGTCTTGGTTGCAATGGCAGGAAATTCTGCTGGTATAAAAATACATGCTGTATTTGTATCAAAAGCTTCAGGTGAAATACTAAAGAAATACACTGGATTGACTGATGTGGAGCTATGGCTCATTCCAAGTTTTGAAAACTCAGCATGGTCTATCATGGCAATTTCATTTATTTCCCTACTAGCTATGTCTGCAGTGTTGGCCACTTGTTTCTTCGTTCGTAGGCATCGCATAAGGAGAGAGAGGCCTCGAGCTTCTCGGGTCCGTGAATTTCATGGTATGAGTAGTCGCCTAGTGAAAGCAATGCCGAGTTTGATATTTACTGCTGTTTTAGAAGACAATTGTACATCAAGAACATGTGCTATATGCCTCGAAGATTATTGTGTTGGAGAGAAGCTCAGGATTCTGCCCTGTTGTCACAAGTTTCATGCTATGTGTGTGGATTCTTGGCTTACTTCATGGAGAACCTTTTGTCCAGTTTGTAAGCGCGATGCAAGAACTGGCTTAGCGGAGCCTCCGCCTTCAGAATCCACACCTTTGCTTTCATCGAGCCTGCAATCTACGGGATCATCTGTCTTATCTTCTGCAAGGTCATCATTAGCATCGTCTTCAGCTATACAAATCGCTCGTCCAACATCACGGTCCCCATCCGTCTCTGGAAGTCACTCTTTAGCTAGTACCCCTTTTGTTCAGCCATCTTACAGGTCCTACCGGCAATCCCCATCCCTAAGCATCAGCCGAAGCTCCATGGATCTTAGGAATGCATCCCAAAGATCTCTAGCTTCTCACCTGAATTCACCACGTTCCATGAATTACCCATCTTTGTCGTCCCTTAACTCGAGGTACATGTCTCCACATATTCCAAGTCCGAGCAATGCCTCAGTAAGTATTCTTGGTTCATCTAGTCACCGACAGCATCCGCTCCGTTACAGTGAGTCAGCCGCGAGCTTCTCAACATTTGCATCCGCAGGCTCCCTTCCAGAGTGTTAA 1332 0.455 MGISNLLLFYFSMVGLCALATGKVVLIGNNITLSFDDIEANFAPTIKGSGECGVLYLAEPLDGCAELTNKAEYLPNATSSFVLVVRGGCSFEDKVRRAQNAGYKAVIVYDNEDGGVLVAMAGNSAGIKIHAVFVSKASGEILKKYTGLTDVELWLIPSFENSAWSIMAISFISLLAMSAVLATCFFVRRHRIRRERPRASRVREFHGMSSRLVKAMPSLIFTAVLEDNCTSRTCAICLEDYCVGEKLRILPCCHKFHAMCVDSWLTSWRTFCPVCKRDARTGLAEPPPSESTPLLSSSLQSTGSSVLSSARSSLASSSAIQIARPTSRSPSVSGSHSLASTPFVQPSYRSYRQSPSLSISRSSMDLRNASQRSLASHLNSPRSMNYPSLSSLNSRYMSPHIPSPSNASVSILGSSSHRQHPLRYSESAASFSTFASAGSLPEC* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2062 443 ProSiteProfiles Zinc finger RING-type profile. 234 276 IPR001841 -
Aev09g2062 443 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 194 281 IPR013083 -
Aev09g2062 443 MobiDBLite consensus disorder prediction 359 386 - -
Aev09g2062 443 Gene3D - 24 154 - -
Aev09g2062 443 CDD PA_C_RZF_like 16 163 IPR044744 -
Aev09g2062 443 PANTHER PROTEASE-ASSOCIATED (PA) RING/U-BOX ZINC FINGER PROTEIN 1 380 - -
Aev09g2062 443 SUPERFAMILY RING/U-box 224 284 - -
Aev09g2062 443 Pfam PA domain 61 142 IPR003137 -
Aev09g2062 443 SMART ring_2 234 275 IPR001841 -
Aev09g2062 443 Pfam Ring finger domain 233 276 IPR001841 -
Aev09g2062 443 CDD mRING-H2-C3H2C2D_ZSWM2 233 276 - -
Aev09g2062 443 SUPERFAMILY PA domain 77 145 IPR046450 -
Aev09g2062 443 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 1 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2062 Aev-Chr9 23824066 23827361 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2062 22 442 C3H Transcription Factor Family AT1G22670 48.492 1.42e-118 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2062 K15692 - gmx:100791248 661.759