Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g2053 ATGACACTAACACAAATTTCTGAAAGACCAACAATAGATATGGAATCATGTGTGCCTCCAGGATTTAGATTTCATCCCACAGAAGAAGAACTTGTGGGGTATTACCTCAAGAGGAAGATTAACTCACTAAAAATCGATCTAGATGTTATTGTTGAGATCGATCTCTACAAAATGGAACCATGGGACATACAAGATAGATGCAAGCTAGGATATGAGGAACAGAACGAGTGGTACTTTTTCAGCCACAAAGACAAGAAGTATCCAACAGGAACAAGAACAAACAGAGCCACTGCAGCTGGGTTCTGGAAAGCAACAGGGAGGGACAAAGCTGTTATGTCCAAAAACCGGATCATTGGAATGAGGAAGACCCTTGTCTTCTACAAGGGACGTGCCCCTAATGGATGGGTTGTGTGCAGAGCATTCAGAAAGCCAAGTCCAAGTCACAGACAAGGGTTTGATCCATGGTGTAGCAGCAGCAATCAACAACACTTGTTCAGAGACCAAAACTATGGAAGACCCTTTTCAATCTCAGACATATTAACCGAAACAAATCATCATCATCATCATCATCATCATGTTCTGAACCCTGCATCATCATCAGCTGAAGGCACAACAAGTTTTAGTAGTAACCCCTTCAGCTCAGAGCAACCACAGTTTGTATCCAACAATAACAACAATTCCAATTCTACTACTTGTCTTATTATGGATCATCACAAACAACTCATTGAGCTTCCACAGCTAGATAGCCCCACAGAGCATCACAATGAAGATTATTGCACTGATGAAATTAGGAGCAGTGGAGGAGGGATAGTTGATTGGAAGAGCTTGGACAATTTGTTTGCTTCACAATTGACAGATTCTGCTAATTACTTTTCATCACAGCCCTTGATGATGATGCCACATAACAATAATCATGAGCTACAACTACAACAATCTCATCCTAGTAATGTCCTAGGATGCTTTGTTCCTGATTCATAA 978 0.409 MTLTQISERPTIDMESCVPPGFRFHPTEEELVGYYLKRKINSLKIDLDVIVEIDLYKMEPWDIQDRCKLGYEEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNRIIGMRKTLVFYKGRAPNGWVVCRAFRKPSPSHRQGFDPWCSSSNQQHLFRDQNYGRPFSISDILTETNHHHHHHHHVLNPASSSAEGTTSFSSNPFSSEQPQFVSNNNNNSNSTTCLIMDHHKQLIELPQLDSPTEHHNEDYCTDEIRSSGGGIVDWKSLDNLFASQLTDSANYFSSQPLMMMPHNNNHELQLQQSHPSNVLGCFVPDS* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g2053 325 Pfam No apical meristem (NAM) protein 19 136 IPR003441 GO:0003677|GO:0006355
Aev09g2053 325 Gene3D NAC domain 27 138 IPR036093 GO:0003677|GO:0006355
Aev09g2053 325 PANTHER NAC DOMAIN-CONTAINING PROTEIN 30 16 134 - -
Aev09g2053 325 PANTHER NAC DOMAIN-CONTAINING PROTEIN 30 133 294 - -
Aev09g2053 325 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 16 134 - -
Aev09g2053 325 MobiDBLite consensus disorder prediction 197 225 - -
Aev09g2053 325 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 133 294 - -
Aev09g2053 325 MobiDBLite consensus disorder prediction 185 225 - -
Aev09g2053 325 SUPERFAMILY NAC domain 13 143 IPR036093 GO:0003677|GO:0006355
Aev09g2053 325 ProSiteProfiles NAC domain profile. 18 182 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g2053 Aev-Chr9 23747089 23750882 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g2053 14 325 NAC Transcription Factor Family AT1G71930 49.435 8.58e-97 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev09g2053 NAM 1.3e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g2053 - - gmx:100812904 410.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g2053 09 23747089 23750882 Aev09g2053 09 23747089 23750882 ECH