Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1994 ATGGATAACCAAATTGGAGCTGGAAAATCTCCCTCACTCGCCGAGAAAATGGTTGGACCGAACTTCATGGACGATATTGACTGCGGAAGCTTCTTCGACCACATCGACGACCTCCTCGACTTCCCCGTCGAAGACGTCGACGGCACCGGCGCCGCCGTATTCCCCGCTGCCGCAACCGCCGCAAACTGCAACTCGCTAGCCAGCATATGGCCGCCCGAGTCCGACTCGTTCCCCGGCTCCGACTCAGTGTTTTCCGGCAACAGCGCTTCGGACCTCTCGGCGGAGCTCTCAGTTCCGTATGAAGACATTGTCCAATTGGAATGGCTGTCGAATTTTGTGGAGGACTCGTTCTCCGGTGGCGGGAGCCTCACCATGAAGAAAGTGGAGCAGCAACCATCCTGCACCACTAAGGATGACTTGGTGCACACGCAATTCCAGACATCGAGCCCGGTCTCTGTCCTCGAGAGCAGCAGCTCCTGCTCCGGAGGGAAGACCGTGCCTCGCAGCCCGGAGGTTTACATCCCTGTGCCGTGTGGCCGTGCTCGCAGCAAGCGTCCACGCCCTGCCGCCTTCAACCCTCGCCCTGCCATGCAACTCATCTCCCCTGCCTCCTCCTCTGTTGGGGAGAACATTCAGCCTAATTTGATTTCCGCCAAGGCCTCCTCGGATTCTGAGAACGTTGCTGAGTCTCAACCTGTGGCCAAGATACCAAAGCAAGCCAATGGGGAGCCTAAGAAGAAAAAGAAGGTCAAAGTGATGCCTCCATTAGGCCAAGCCGACGCCAACCAGATCGGTTCCCAACCGGTTAGGAAATGCATGCATTGCGAGATCACCAAGACACCACAATGGAGGGCAGGGCCAATGGGGCCAAAAACACTTTGCAACGCATGCGGCGTGCGCTACAAGTCAGGCCGGCTCTTCCCCGAGTACCGGCCAGCAGCCAGTCCAACTTTCTGCCCATCCTTGCACTCCAATTCCCATAAGAAGGTCCTGGAAATGAGGTGCAAGGGTTTTGATCAATCTGATTTTGCAACCAATGCAGCTGCATCACCAGAACTCATTCCCAACACTAACAGCAGCATCACCCTGGAGTACATGTGA 1101 0.5631 MDNQIGAGKSPSLAEKMVGPNFMDDIDCGSFFDHIDDLLDFPVEDVDGTGAAVFPAAATAANCNSLASIWPPESDSFPGSDSVFSGNSASDLSAELSVPYEDIVQLEWLSNFVEDSFSGGGSLTMKKVEQQPSCTTKDDLVHTQFQTSSPVSVLESSSSCSGGKTVPRSPEVYIPVPCGRARSKRPRPAAFNPRPAMQLISPASSSVGENIQPNLISAKASSDSENVAESQPVAKIPKQANGEPKKKKKVKVMPPLGQADANQIGSQPVRKCMHCEITKTPQWRAGPMGPKTLCNACGVRYKSGRLFPEYRPAASPTFCPSLHSNSHKKVLEMRCKGFDQSDFATNAAASPELIPNTNSSITLEYM* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1994 366 PANTHER GATA TRANSCRIPTION FACTOR 8 17 366 - -
Aev09g1994 366 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 270 329 - -
Aev09g1994 366 MobiDBLite consensus disorder prediction 219 251 - -
Aev09g1994 366 Gene3D - 266 316 IPR013088 GO:0006355|GO:0008270
Aev09g1994 366 ProSiteProfiles GATA-type zinc finger domain profile. 266 302 IPR000679 GO:0006355|GO:0043565
Aev09g1994 366 SMART GATA_3 266 316 IPR000679 GO:0006355|GO:0043565
Aev09g1994 366 Pfam GATA zinc finger 272 305 IPR000679 GO:0006355|GO:0043565
Aev09g1994 366 CDD ZnF_GATA 271 318 IPR000679 GO:0006355|GO:0043565
Aev09g1994 366 PIRSF Txn_fac_GATA_plant 15 361 IPR016679 GO:0003677|GO:0005634|GO:0045893
Aev09g1994 366 PANTHER GATA TRANSCRIPTION FACTOR 17 366 - -
Aev09g1994 366 ProSitePatterns GATA-type zinc finger domain. 272 297 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1994 Aev-Chr9 23314595 23317036 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1994 35 334 C2C2-Gata Transcription Factor Family AT4G32890 36.755 1.85e-45 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev09g1994 GATA 6.4e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1994 - - gmx:100815693 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g1994 09 23314595 23317036 Aev09g1994 09 23314595 23317036 ECH