Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1989 ATGGGAAGCAAGTGGAAGAAAGCGAAGGTGGCTCTGGGTCTGAACTTGTGCATGTTTGTTCCTAGGACCTTAGACGACGACTCATCGCCGCCGCACACGGCGGTTTCCTCCGAGAGGCTGTCGGACGCGGCTCTGCTGTCGCCGGTGGCGAACTGGGACAACGGTTCTTCGAGGCAAACGACGCCGTTGCCATCTTTCAAGCTGTCTAGAAGTGGCAGCAAGTCCTCTTCAAAGCAAACCTGCTCAATATGCTTAACCAAAATGAAACAAGGATCTGGCCATGCTATATTCACTGCTGAATGTTCACATTCCTTCCATTTTCACTGCATTGCTTCAAATGTGAAACATGGAAACCAACTATGTCCAGTGTGCAGAGCTAAGTGGAAGGAAATACCTTTCTCGGGTCCCAATTTGGATCCAATCCCAGGCAGAGTTTCACCTAGTCCAATTAATTGGTCCCAAAATGATGCTTTGATGGCTGTGGTCCATCGCCTGCCTGTACCTCCTCATCCTCGGCGAGATTTGAATAGGCGGCATGTTGTGCCACTTTATCAGGCTCCTGAGCCGGGCATTTTCGATGATGATGAAACGCTAAATCACCAAGCTGTACTTTCTGAGAGAAGTCCTTGCAGTAAGAGCGCTGAAGATATGGATGCTGTCACAGCAATTGAGATTAAAACGTACCCGGAAGTGTCTGCTGCTCCGAGGTCCAATACTTATTCTAACTTCACGGTGTTGGTCCATCTCAAAGCTACTGCTGCTACAGCAGCTGCTGCAACCAGAAGTCAAAATGTTAGCAGAAACCAGGCTAGCTTGACACAGATTTCTCAGACACCACGTGCCCCTGTTGACCTGGTGACGGTGCTTGACATCAGTGGTAGCATGGCTGGAACAAAGTTGGCTCTACTGAAAAGAGCTATGGGATTTGTAATCCAGAACCTAGGCTCTAATGACCGGCTTTCTGTTATTGCTTTCTCTTCCACAGCTCGCCGCCTCTTCCCTCTGTGCAGGATGACTGATTCGGGACGGCAGCAGGCTTTGCAAGCTGTTAATTCTTTGGTTGCAAATGGAGGTACTAATATTGCTGAAGGTCTGAGAAAAGGCGCTAAGATAATGGAAGACCGAAAAGAGAAGAATCCTGTTGCCAGTATTATCCTATTATCTGACGGCCAAGATAATTACACTGTCAATGGCTCTGGAACAAACCAACCTCAACCTAATTACCAGTTGCTTCTGCCTACTTCTATCAGTGGTCGCGATAATTCAGGGTTTCAAATTCCTGTGCATGCTTTTGGGTTTGGTACAGATCATGATGCTTTATCAATGCACTCAATTTCAGAGATTTCTGGTGGCACATTTTCTTTCATTGAGACTGAAGCTGTGCTGCAGGATGCATTTGCTCAATGCATTGGAGGACTTTTGAGTGTTGTTGTCCAGGAGCTGCAAGTGGAAATTGAGTGTATACATCCGAATCTGAATCTTGTCTCACTTAAGGCAGGAAGTTACCCAAGCCGCATCATTGCTGATGGACGCAAAGGGTTAATTGATGTTGGAGACTTGTATGCTGATGAAGAGAGGGACTTTCTAGTTTCAGTTCATGTCCCTGCTACATCTGGCAATGAGACATCATTGGTAAAGGTGAAGTGTGTTTACAAGGACCCCTTAACTCAGGAAACAGCAACATTGGAACGTGAAGAAGTAAAGATTGAGAGGCCTGAAAAAGCAGGGCAGGTTGTAATGTCACTTGAAGTGGACAGACAGCGCAACAGGCTCCAGGCAGCTGAAGCAATGGCCCAGGCACGGCTGGCAGCTGAACAGGGAGACCTATCCGGTGCCATATCAATCCTTGAAAACTGTCGAAAGATGCTGTCAGAGACAATTTCAGCCAAATCTAACGATCGCCTATGTGTTGCATTGGATGCTGAACTCAAGGAAATGCAAGAGAGGATGGCGAGCAGGCATGTGTATGAAGCATCTGGGAGAGCATATATACTTTCCGGATTGAGTTCACATTCATGGCAAAGAGCAACAGCAAGAGGCGATTCCACCGATAGGTCGAGTCTCGTACAGTCATATCAGACCCCATCAATGACTGAGATGCTCACTCGTTCTCAGGCTATGTTACTAGGTAGTCCGTCTGGCCAGAGGCTTCTCCATCCTCTGCTATCATTCAGATCACAACCAAGCCCAAGGTAA 2196 0.4736 MGSKWKKAKVALGLNLCMFVPRTLDDDSSPPHTAVSSERLSDAALLSPVANWDNGSSRQTTPLPSFKLSRSGSKSSSKQTCSICLTKMKQGSGHAIFTAECSHSFHFHCIASNVKHGNQLCPVCRAKWKEIPFSGPNLDPIPGRVSPSPINWSQNDALMAVVHRLPVPPHPRRDLNRRHVVPLYQAPEPGIFDDDETLNHQAVLSERSPCSKSAEDMDAVTAIEIKTYPEVSAAPRSNTYSNFTVLVHLKATAATAAAATRSQNVSRNQASLTQISQTPRAPVDLVTVLDISGSMAGTKLALLKRAMGFVIQNLGSNDRLSVIAFSSTARRLFPLCRMTDSGRQQALQAVNSLVANGGTNIAEGLRKGAKIMEDRKEKNPVASIILLSDGQDNYTVNGSGTNQPQPNYQLLLPTSISGRDNSGFQIPVHAFGFGTDHDALSMHSISEISGGTFSFIETEAVLQDAFAQCIGGLLSVVVQELQVEIECIHPNLNLVSLKAGSYPSRIIADGRKGLIDVGDLYADEERDFLVSVHVPATSGNETSLVKVKCVYKDPLTQETATLEREEVKIERPEKAGQVVMSLEVDRQRNRLQAAEAMAQARLAAEQGDLSGAISILENCRKMLSETISAKSNDRLCVALDAELKEMQERMASRHVYEASGRAYILSGLSSHSWQRATARGDSTDRSSLVQSYQTPSMTEMLTRSQAMLLGSPSGQRLLHPLLSFRSQPSPR* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1989 731 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 50 130 IPR013083 -
Aev09g1989 731 SUPERFAMILY RING/U-box 76 131 - -
Aev09g1989 731 Pfam von Willebrand factor type A domain 284 467 IPR002035 -
Aev09g1989 731 PANTHER OS10G0464500 PROTEIN 3 709 - -
Aev09g1989 731 SMART ring_2 81 124 IPR001841 -
Aev09g1989 731 Pfam Ring finger domain 80 125 IPR001841 -
Aev09g1989 731 MobiDBLite consensus disorder prediction 51 77 - -
Aev09g1989 731 Gene3D von Willebrand factor, type A domain 284 471 IPR036465 -
Aev09g1989 731 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 3 709 - -
Aev09g1989 731 Pfam VWA / Hh protein intein-like 633 705 IPR032838 -
Aev09g1989 731 SUPERFAMILY vWA-like 279 470 IPR036465 -
Aev09g1989 731 CDD RING-H2 81 125 - -
Aev09g1989 731 CDD vWA_C3HC4_type 283 457 - -
Aev09g1989 731 ProSiteProfiles VWFA domain profile. 284 477 IPR002035 -
Aev09g1989 731 SMART VWA_4 282 469 IPR002035 -
Aev09g1989 731 ProSiteProfiles Zinc finger RING-type profile. 81 125 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1989 Aev-Chr9 23262325 23265966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1989 53 135 C3H Transcription Factor Family AT2G18670 31.395 3.33e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1989 - - gmx:100818239 1203.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g1989 09 23262325 23265966 Aev09g1989 09 23262325 23265966 ECH