Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1987 ATGGAGAATTCCGGGATGAATTTTTGCAACGGCAATGGGTCATTGAACCTTTGCAACGGTAGCAATGACCCATTGAACTGGGGCAAGGCCGCGGAGGCCTTGAAAGGTAGTCACCTTGATGAGGTGAAGCGCATGGTGGACGAGTACCGGAACAAGGTGGTGTTTCTAGGTGGTAAAGGGCTAACCATATCTCAGGTAGCGGCGGTGGCCTCCCACGATGATGGCGTGGCGGTGGAGCTCGCGGAGGAGGCACGTGCCGGCGTGAAGGCGAGCAGTGATTGGGTGAGGGAGAGCATGGACAAAGGAACTGATAGTTATGGGGTCACAACCGGTTTTGGTGCAACCTCACATAGGAGAACCAAGCAAGGTGGTGCCCTCCAAAATGAACTCATAAGATTCTTGAATGCTGGAATTTTCGGCAATGGAACAGAATCAAGCCAAACATTACCTCACACAGCAACAAGAGCAGCAATGCTTGTTAGGATCAACACATTGCTCCAAGGCTATTCTGGAATCCGATTTGAGATCTTGGAAGCCATAACAAAGTTCTTGAACCACAACATAACACCATGCCTCCCTCTAAGAGGAACAATCACTGCATCAGGTGACCTCGTACCTCTCTCCTATGTTGCTGGCCTTTTGATAGGAAGGCCAAACTCCAAGTCAATTGGACCAAATGGCCAAGTCCTCAATGCCAAACAGGCCTTTGATCTCGCCGGCATCGACGGCGGCTTCTTCGAGTTGCAGCCCAAGGAGGGACTGGCTCTAGTCAATGGAACTGCAGTAGGGTCTGGTTTGGCTTCCATGGTTCTGTTTGAGGCCAACATTCTTGCTGTCCTTTCTGAAGTAGCTTCGGCGATCTTCGCCGAAGTTATGCAGGGGAAACCAGAGTTCACTGATCACTTGACTCATAAATTGAAGCACCATCCTGGCCAAATTGAAGCTGCAGCTATAATGGAACACATTTTGGATGGGAGCTCTTATGTTAAGGCTGCACAGAAGGTGCATGAGATTGATCCTCTTCAGAAGCCGAAACAGGACAGGTATGCTCTTAGGACTTCACCTCAATGGCTTGGCCCACAGATTGAAGTTATCAGACATGCTACCAAGATGATTGAGAGGGAGATCAACTCTGTTAATGACAATCCATTGATCGATGTATCGAGGAGCAAGGCGATTCATGGAGGGAATTTCCAAGGCACACCAATTGGTGTTTCAATGGATAACACAAGGCTTGCAATTGCTTCAATTGGGAAGCTTATGTTTGCTCAATTCTCTGAGCTTGTCAATGACTTTTACAACAATGGTTTGCCTTCAAATCTTACTGCTAGCCGCAATCCTAGCTTGGATTATGGCTTCAAAGGTGCTGAGATTGCTATGGCTTCATACTGTTCTGAGCTTCAGTACCTTGCAAATCCTGTCACCAACCATGTTCAGAGTGCAGAACAGCATAATCAGGATGTGAACTCTTTAGGTTTGATCTCATCAAGGAAAACAGCTGAAGCAGTTGAGATTTTGAAGCTTATGTCATCCACTTTCTTGGTTGCATTGTGCCAAGCCATTGATCTGAGGCACTTGGAGGAGAATTTGAAGAACACTGTGAAGAACACTGTCAGCCAAGTTGCTAAGAGGGTCCTCACAATGGGTGTGAATGGTGAGTTGCATCCATCAAGGTTCTGTGAGAAGGACTTGCTCAAAGTCGTCGACCGCGAGTATGTTTTCGCCTATGTGGATGATCCTTGCAGTGCAACCTACCCTCTGATGCAGAAGCTGAGGCAGGTTCTTGTTGATCATGCATTGTTGAATGGTGAGGAAGAGGCCAATTCAAGCACCTCAATTTTCCAAAAGATTGGTGCTTTTGAGGAAGAACTCAAGACCCTTTTGCCTAAGGAAGTGGAAAGTGCAAGAATTGAAGTTGAGAGTGGGAATCCTGCTATTCCTAACAGGATCAAGGAATGTAGATCCTATCCATTGTACAAATTTATCAGAGAAAATTTGGGAACTGATTTGCTGACAGGTGAGAAAGTTAGGTCTCCTGGTGAAGAGTGTGATAAGGTGTTCTCTGCAATGTGTCAAGGGAAGTTGATTGATCCTATGATGGAGTGTCTCAAGGAGTGGAATGGTGCTCCTTTACCAATATGCTAG 2145 0.4671 MENSGMNFCNGNGSLNLCNGSNDPLNWGKAAEALKGSHLDEVKRMVDEYRNKVVFLGGKGLTISQVAAVASHDDGVAVELAEEARAGVKASSDWVRESMDKGTDSYGVTTGFGATSHRRTKQGGALQNELIRFLNAGIFGNGTESSQTLPHTATRAAMLVRINTLLQGYSGIRFEILEAITKFLNHNITPCLPLRGTITASGDLVPLSYVAGLLIGRPNSKSIGPNGQVLNAKQAFDLAGIDGGFFELQPKEGLALVNGTAVGSGLASMVLFEANILAVLSEVASAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKVHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRHATKMIEREINSVNDNPLIDVSRSKAIHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQYLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVEILKLMSSTFLVALCQAIDLRHLEENLKNTVKNTVSQVAKRVLTMGVNGELHPSRFCEKDLLKVVDREYVFAYVDDPCSATYPLMQKLRQVLVDHALLNGEEEANSSTSIFQKIGAFEEELKTLLPKEVESARIEVESGNPAIPNRIKECRSYPLYKFIRENLGTDLLTGEKVRSPGEECDKVFSAMCQGKLIDPMMECLKEWNGAPLPIC* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1987 714 Gene3D Fumarase/aspartase (Central domain) 261 709 - -
Aev09g1987 714 PANTHER HISTIDINE AMMONIA-LYASE 12 714 IPR001106 -
Aev09g1987 714 SUPERFAMILY L-aspartase-like 23 714 IPR008948 GO:0003824
Aev09g1987 714 Gene3D - 15 260 IPR024083 -
Aev09g1987 714 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 196 212 IPR022313 GO:0016841
Aev09g1987 714 PANTHER PHENYLALANINE AMMONIA-LYASE 1-LIKE 12 714 - -
Aev09g1987 714 Gene3D - 527 648 IPR023144 -
Aev09g1987 714 CDD PAL-HAL 59 524 IPR001106 -
Aev09g1987 714 Pfam Aromatic amino acid lyase 61 537 IPR001106 -
Aev09g1987 714 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 23 704 IPR005922 GO:0005737|GO:0006559|GO:0016841
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1987 Aev-Chr9 23225596 23229959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1987 1 714 Monolignol Biosynthesis Gene Families AT2G37040 81.241 0.0 1234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1987 K10775 - gmx:100818777 1282.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g0262 06 1964142 1967578 Aev09g1987 09 23225596 23229959 ECH
Aev02g2298 02 23863653 23867680 Aev09g1987 09 23225596 23229959 ECH
Aev09g1987 09 23225596 23229959 Aev09g1987 09 23225596 23229959 ECH