Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev09g1969 ATGTGTGGAAGCGAGAACTCCAAGGCCATGGTGGTTGTGGCTCCTTTGGCTGAGTCCATTAAGGAGATTTCTGGGCTTCCAGAGTGCCACAATGTTTGCAAGAGGATGTATGGGAATTTGGTTAGGAGGGTGAAGCTTTTGAGTCCTTTGTTTGAGGAATTGAAGGACAGCGATGAGTCCCTCAGTGATGAACAGGTTAAAGCCTTTGAGTCTCTTAGGGTTGCTTTGGATTCAGCTAAGACCCTTCTCAACTGTGTGAGCCAAGGGAGCAAGCTTTATCAGGCTTTGCAGAGGAATGATACAGTGGATAAGTTCCAACAAATAACAGAAAAAATTGAAGCAGCATTGAATGAAATTTCGTACGACAAACTTGAGATATCGGAGGAAGTTCGAGAGCAGATTGAACTGGTGCATGCTCAATTCAAAAGAGCCAAGGCTCCTACAGAATTTGCTGATTTACAACTAGACTTGGATATGGCTGTAGCACAGAAAGAAAAGGACCCGGATCCTACTGTACTCAGCAGACTTTCTGACAAGTTGCATTTGAGAACTATAAATGACCTAAAGAAAGAGTCGGGGGAAATACATGAATTGGTTATCACAAGCGGTGGGGAACCGGGGGAATATTTTGAGATGATGACATCCCTTCTTAGGAAACTGAAGGACTGTGTGCTCACAGAAAATCCCGAGGTTGATACCAGTGAGGGTGAGAAAATGCCAATTAAGCACAGGTCTCCTGTAATCCCAGACGATTTTCGATGTCCTATATCTCTTGAACTAATGAAAGATCCTGTCATTGTCTCTACGGGTCAGACATATGAAAGATCCTGCATTCAAAAATGGCTTGATGCTGGTCACAAAACCTGCCCGAAGACGCAGCAGACACTTTTGCATACAGCCCTTACCCCTAACTATGTTTTGAAGAGTCTGATCGCTTTATGGTGTGAAACCAATGGTGTTGAGCTACCAAAGAAGCAAGGGGGCTGCAGAACAAAGAAATCTGGTGGCAGTCTTTCAGATTGTGACCGAACTGCTATTAATGCTTTATTGGATAAACTTGCAGATCATGATATAGAGCAGCAAAGAGCTGCTGCTGGTGAGCTCCGGCTGCTGGCTAAGAGGAATGCGGATAACCGAGTCGCAATAGGAGCAGCTGGAGCTATCCCGGCTCTCATAAAGTTGCTTTGTGAAGGTACTCCCAGAGGTAAGAAGGATGCTGCTACTGCCATCTTTAACCTTTCTATCTATCAAGGAAACAAGGCAAGAGCCGTAAAAGCCGGTATAGTTGCGCCACTGATGCGATTTCTGAAGGATGCTGGGGGTGGGATGGTAGATGAAGCTCTAGCTATAATGGCAATCCTTGCAAGCCACCATGAAGGAAGGATAGCAATCAGTCAGGCTGAGCCAATCCCTATTCTAGTGGAGGTTATCCGAACCGGGTCACCGCGCAACAGGGAGAATGCTGCAGCCGTCTTGTGGTCACTATGCACAGGAGATCTACTGCAACTGAAACTCGCAAAGGAACTCGGCGCAGAAGAAGCGTTGCAGGAATTATCCGAAAATGGCACTGATAGAGCCAAGAGAAAAGCAGGAAGTATCATAGAACTGTTGCAGCGGTTGGATGGGGATAAGAATGTGCAAAATTCATAG 1650 0.4582 MCGSENSKAMVVVAPLAESIKEISGLPECHNVCKRMYGNLVRRVKLLSPLFEELKDSDESLSDEQVKAFESLRVALDSAKTLLNCVSQGSKLYQALQRNDTVDKFQQITEKIEAALNEISYDKLEISEEVREQIELVHAQFKRAKAPTEFADLQLDLDMAVAQKEKDPDPTVLSRLSDKLHLRTINDLKKESGEIHELVITSGGEPGEYFEMMTSLLRKLKDCVLTENPEVDTSEGEKMPIKHRSPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIQKWLDAGHKTCPKTQQTLLHTALTPNYVLKSLIALWCETNGVELPKKQGGCRTKKSGGSLSDCDRTAINALLDKLADHDIEQQRAAAGELRLLAKRNADNRVAIGAAGAIPALIKLLCEGTPRGKKDAATAIFNLSIYQGNKARAVKAGIVAPLMRFLKDAGGGMVDEALAIMAILASHHEGRIAISQAEPIPILVEVIRTGSPRNRENAAAVLWSLCTGDLLQLKLAKELGAEEALQELSENGTDRAKRKAGSIIELLQRLDGDKNVQNS* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev09g1969 549 SMART arm_5 457 497 IPR000225 GO:0005515
Aev09g1969 549 SMART arm_5 416 456 IPR000225 GO:0005515
Aev09g1969 549 SMART arm_5 375 415 IPR000225 GO:0005515
Aev09g1969 549 Pfam Armadillo/beta-catenin-like repeat 375 414 IPR000225 GO:0005515
Aev09g1969 549 SUPERFAMILY RING/U-box 247 323 - -
Aev09g1969 549 Pfam U-box domain 248 318 IPR003613 GO:0004842|GO:0016567
Aev09g1969 549 SUPERFAMILY ARM repeat 343 537 IPR016024 -
Aev09g1969 549 Gene3D - 6 122 IPR036537 GO:0007166
Aev09g1969 549 Gene3D - 443 548 IPR011989 -
Aev09g1969 549 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 14 15 382 - -
Aev09g1969 549 SMART Ubox_2 251 314 IPR003613 GO:0004842|GO:0016567
Aev09g1969 549 PANTHER U BOX DOMAIN-CONTAINING 15 382 - -
Aev09g1969 549 CDD RING-Ubox_PUB 252 294 IPR045210 -
Aev09g1969 549 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 14 377 540 - -
Aev09g1969 549 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 246 321 IPR013083 -
Aev09g1969 549 Gene3D - 335 442 IPR011989 -
Aev09g1969 549 ProSiteProfiles U-box domain profile. 247 321 IPR003613 GO:0004842|GO:0016567
Aev09g1969 549 PANTHER U BOX DOMAIN-CONTAINING 377 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev09g1969 Aev-Chr9 23078070 23080946 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev09g1969 342 542 U-box Gene Family AT3G54850 64.179 9.12e-70 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev09g1969 - - gmx:100777452 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev09g1969 09 23078070 23080946 Aev09g1969 09 23078070 23080946 ECH